RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 KRTAP4-1Q9BYQ7 146 aa3.57□□□□□ -1.84
SNX13-208ENST00000482558 KRTAP12-2P59991 146 aa3.55□□□□□ -1.84
SNX13-208ENST00000482558 KRTAP19-2Q3LHN2 52 aa3.55□□□□□ -1.84
SNX13-208ENST00000482558 FLGP20930 4061 aaPredicted RBP3.52□□□□□ -1.85
SNX13-208ENST00000482558 INE1O15225 51 aa3.51□□□□□ -1.85
SNX13-208ENST00000482558 LCE1CQ5T751 118 aa3.44□□□□□ -1.86
SNX13-208ENST00000482558 LCE1BQ5T7P3 118 aa3.44□□□□□ -1.86
SNX13-208ENST00000482558 PP632Q6XCG6 107 aa3.41□□□□□ -1.86
SNX13-208ENST00000482558 MUC2Q02817 5179 aa3.4□□□□□ -1.87
SNX13-208ENST00000482558 FAT4Q6V0I7 4981 aa3.39□□□□□ -1.87
SNX13-208ENST00000482558 KRTAP5-8O75690 187 aa3.37□□□□□ -1.87
SNX13-208ENST00000482558 M0R2T5 61 aa3.36□□□□□ -1.87
SNX13-208ENST00000482558 C10orf95Q9H7T3 257 aa3.36□□□□□ -1.87
SNX13-208ENST00000482558 SPRR2GQ9BYE4 73 aa3.35□□□□□ -1.87
SNX13-208ENST00000482558 PLAC4Q8WY50 150 aa3.34□□□□□ -1.87
SNX13-208ENST00000482558 MT1HP80294 61 aa3.32□□□□□ -1.88
SNX13-208ENST00000482558 TNP1P09430 55 aa3.31□□□□□ -1.88
SNX13-208ENST00000482558 CRCT1Q9UGL9 99 aa3.31□□□□□ -1.88
SNX13-208ENST00000482558 SPRR5A0A1B0GTR4 108 aa3.29□□□□□ -1.88
SNX13-208ENST00000482558 FSIP2Q5CZC0 6907 aa3.28□□□□□ -1.89
SNX13-208ENST00000482558 KRTAP10-10P60014 251 aa3.26□□□□□ -1.89
SNX13-208ENST00000482558 MT2AP02795 61 aa3.24□□□□□ -1.89
SNX13-208ENST00000482558 KRTAP19-8Q3LI54 63 aa3.22□□□□□ -1.89
SNX13-208ENST00000482558 MT1FP04733 61 aa3.2□□□□□ -1.9
SNX13-208ENST00000482558 MT1BP07438 61 aa3.1□□□□□ -1.91
SNX13-208ENST00000482558 MT1XP80297 61 aa3.05□□□□□ -1.92
SNX13-208ENST00000482558 KRTAP8-1Q8IUC2 63 aa3.05□□□□□ -1.92
SNX13-208ENST00000482558 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
SNX13-208ENST00000482558 KRTAP12-3P60328 96 aa2.95□□□□□ -1.94
SNX13-208ENST00000482558 SSPOA2VEC9 5147 aa2.91□□□□□ -1.94
SNX13-208ENST00000482558 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
SNX13-208ENST00000482558 FCGBPQ9Y6R7 5405 aaPredicted RBP2.86□□□□□ -1.95
SNX13-208ENST00000482558 USH2AO75445 5202 aa2.86□□□□□ -1.95
SNX13-208ENST00000482558 SYNE2Q8WXH0 6885 aaKnown RBP2.86□□□□□ -1.95
SNX13-208ENST00000482558 KRTAP6-3Q3LI67 103 aa2.83□□□□□ -1.96
SNX13-208ENST00000482558 KRTAP19-5Q3LI72 72 aa2.81□□□□□ -1.96
SNX13-208ENST00000482558 KRTAP19-6Q3LI70 58 aa2.8□□□□□ -1.96
SNX13-208ENST00000482558 KRTAP5-7Q6L8G8 165 aa2.8□□□□□ -1.96
SNX13-208ENST00000482558 MACF1Q9UPN3 7388 aaKnown RBP2.79□□□□□ -1.96
SNX13-208ENST00000482558 KRTAP20-1Q3LI63 56 aa2.74□□□□□ -1.97
SNX13-208ENST00000482558 NEBP20929 6669 aa2.73□□□□□ -1.97
SNX13-208ENST00000482558 KRTAP19-7Q3SYF9 63 aa2.71□□□□□ -1.98
SNX13-208ENST00000482558 MT1EP04732 61 aa2.68□□□□□ -1.98
SNX13-208ENST00000482558 KRTAP12-4P60329 112 aa2.65□□□□□ -1.99
SNX13-208ENST00000482558 MT1LQ93083 61 aa2.65□□□□□ -1.99
SNX13-208ENST00000482558 MUC12Q9UKN1 5478 aa2.62□□□□□ -1.99
SNX13-208ENST00000482558 KMT2DO14686 5537 aa2.6□□□□□ -1.99
SNX13-208ENST00000482558 MT1GP13640 62 aa2.59□□□□□ -1.99
SNX13-208ENST00000482558 KRTAP2-3P0C7H8 128 aa2.56□□□□□ -2
SNX13-208ENST00000482558 KRTAP2-4Q9BYR9 128 aa2.56□□□□□ -2
SNX13-208ENST00000482558 KRTAP19-3Q7Z4W3 81 aa2.55□□□□□ -2
SNX13-208ENST00000482558 GPR98Q8WXG9 6306 aa2.54□□□□□ -2
SNX13-208ENST00000482558 KRTAP2-1Q9BYU5 128 aa2.53□□□□□ -2
SNX13-208ENST00000482558 MDN1Q9NU22 5596 aa2.52□□□□□ -2.01
SNX13-208ENST00000482558 MT1MQ8N339 61 aa2.5□□□□□ -2.01
SNX13-208ENST00000482558 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
SNX13-208ENST00000482558 SPRR2FQ96RM1 72 aa2.47□□□□□ -2.01
SNX13-208ENST00000482558 SPRR2EP22531 72 aa2.32□□□□□ -2.04
SNX13-208ENST00000482558 SPRR2BP35325 72 aa2.32□□□□□ -2.04
SNX13-208ENST00000482558 SPRR2AP35326 72 aa2.32□□□□□ -2.04
SNX13-208ENST00000482558 MT1AP04731 61 aa2.28□□□□□ -2.04
SNX13-208ENST00000482558 SPRR2DP22532 72 aa2.25□□□□□ -2.05
SNX13-208ENST00000482558 KRTAP6-1Q3LI64 71 aa2.2□□□□□ -2.06
SNX13-208ENST00000482558 DSTQ03001 7570 aaKnown RBP2.19□□□□□ -2.06
SNX13-208ENST00000482558 KRTAP5-10Q6L8G5 202 aa2.18□□□□□ -2.06
SNX13-208ENST00000482558 AHNAK2Q8IVF2 5795 aa2.18□□□□□ -2.06
SNX13-208ENST00000482558 HMCN1Q96RW7 5635 aa2.15□□□□□ -2.07
SNX13-208ENST00000482558 SYNE1Q8NF91 8797 aaKnown RBP2.05□□□□□ -2.08
SNX13-208ENST00000482558 MT4P47944 62 aa2.02□□□□□ -2.09
SNX13-208ENST00000482558 KRTAP6-2Q3LI66 62 aa2□□□□□ -2.09
SNX13-208ENST00000482558 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
SNX13-208ENST00000482558 KRTAP20-2Q3LI61 65 aa1.9□□□□□ -2.11
SNX13-208ENST00000482558 PRM1P04553 51 aa1.88□□□□□ -2.11
SNX13-208ENST00000482558 MUC5BQ9HC84 5762 aaPredicted RBP1.88□□□□□ -2.11
SNX13-208ENST00000482558 MUC5ACP98088 5654 aa1.87□□□□□ -2.11
SNX13-208ENST00000482558 PHGR1C9JFL3 82 aa1.28□□□□□ -2.2
SNX13-208ENST00000482558 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
SNX13-208ENST00000482558 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 10.6 ms