RNA–Protein interactions for RNA: ENST00000479364.1

NFIA-210, Transcript of nuclear factor I A, humanhuman

TSL 5

Gene NFIA, Length 1,010 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-210ENST00000479364 FCGBPQ9Y6R7 5405 aaPredicted RBP4.62□□□□□ -1.67
NFIA-210ENST00000479364 MACF1Q9UPN3 7388 aaKnown RBP4.56□□□□□ -1.68
NFIA-210ENST00000479364 KRTAP19-5Q3LI72 72 aa4.51□□□□□ -1.69
NFIA-210ENST00000479364 KRTAP4-8A0A0G2JLE6 195 aa4.5□□□□□ -1.69
NFIA-210ENST00000479364 KRTAP19-6Q3LI70 58 aa4.5□□□□□ -1.69
NFIA-210ENST00000479364 LCE1DQ5T752 114 aa4.47□□□□□ -1.69
NFIA-210ENST00000479364 A0A0A0MQY5 61 aa4.45□□□□□ -1.7
NFIA-210ENST00000479364 LCE3CQ5T5A8 94 aa4.42□□□□□ -1.7
NFIA-210ENST00000479364 NEBP20929 6669 aa4.4□□□□□ -1.7
NFIA-210ENST00000479364 KRTAP19-7Q3SYF9 63 aa4.37□□□□□ -1.71
NFIA-210ENST00000479364 KRTAP6-3Q3LI67 103 aa4.36□□□□□ -1.71
NFIA-210ENST00000479364 KRTAP4-7Q9BYR0 210 aa4.33□□□□□ -1.72
NFIA-210ENST00000479364 MT1EP04732 61 aa4.3□□□□□ -1.72
NFIA-210ENST00000479364 KRTAP4-9Q9BYQ8 210 aa4.3□□□□□ -1.72
NFIA-210ENST00000479364 MUC12Q9UKN1 5478 aa4.3□□□□□ -1.72
NFIA-210ENST00000479364 LCE5AQ5TCM9 118 aa4.29□□□□□ -1.72
NFIA-210ENST00000479364 KRTAP20-1Q3LI63 56 aa4.27□□□□□ -1.73
NFIA-210ENST00000479364 MT1LQ93083 61 aa4.27□□□□□ -1.73
NFIA-210ENST00000479364 KRTAP4-11Q9BYQ6 195 aa4.18□□□□□ -1.74
NFIA-210ENST00000479364 KRTAP4-2Q9BYR5 136 aa4.13□□□□□ -1.75
NFIA-210ENST00000479364 INE1O15225 51 aa4.12□□□□□ -1.75
NFIA-210ENST00000479364 MT1GP13640 62 aa4.12□□□□□ -1.75
NFIA-210ENST00000479364 KMT2DO14686 5537 aa4.11□□□□□ -1.75
NFIA-210ENST00000479364 KRTAP9-6A8MVA2 160 aa4.09□□□□□ -1.75
NFIA-210ENST00000479364 KRTAP19-3Q7Z4W3 81 aa4.09□□□□□ -1.75
NFIA-210ENST00000479364 MDN1Q9NU22 5596 aa4.08□□□□□ -1.76
NFIA-210ENST00000479364 MT1MQ8N339 61 aa4.03□□□□□ -1.76
NFIA-210ENST00000479364 KRTAP2-3P0C7H8 128 aa4.02□□□□□ -1.77
NFIA-210ENST00000479364 KRTAP2-4Q9BYR9 128 aa4.02□□□□□ -1.77
NFIA-210ENST00000479364 KRTAP2-1Q9BYU5 128 aa4.02□□□□□ -1.77
NFIA-210ENST00000479364 KRTAP5-9P26371 169 aa4.01□□□□□ -1.77
NFIA-210ENST00000479364 SPRR2FQ96RM1 72 aa3.98□□□□□ -1.77
NFIA-210ENST00000479364 GPR98Q8WXG9 6306 aa3.93□□□□□ -1.78
NFIA-210ENST00000479364 KRTAP4-3Q9BYR4 195 aa3.87□□□□□ -1.79
NFIA-210ENST00000479364 KRTAP2-2Q9BYT5 123 aa3.85□□□□□ -1.79
NFIA-210ENST00000479364 SPRR2EP22531 72 aa3.78□□□□□ -1.8
NFIA-210ENST00000479364 SPRR2BP35325 72 aa3.78□□□□□ -1.8
NFIA-210ENST00000479364 SPRR2AP35326 72 aa3.78□□□□□ -1.8
NFIA-210ENST00000479364 LCE1AQ5T7P2 110 aa3.78□□□□□ -1.8
NFIA-210ENST00000479364 SPRR2DP22532 72 aa3.67□□□□□ -1.82
NFIA-210ENST00000479364 MT1AP04731 61 aa3.65□□□□□ -1.83
NFIA-210ENST00000479364 KRTAP5-5Q701N2 237 aaPredicted RBP3.6□□□□□ -1.83
NFIA-210ENST00000479364 KRTAP6-1Q3LI64 71 aa3.55□□□□□ -1.84
NFIA-210ENST00000479364 DSTQ03001 7570 aaKnown RBP3.54□□□□□ -1.84
NFIA-210ENST00000479364 KRTAP5-3Q6L8H2 238 aa3.5□□□□□ -1.85
NFIA-210ENST00000479364 KRTAP12-4P60329 112 aa3.45□□□□□ -1.86
NFIA-210ENST00000479364 HMCN1Q96RW7 5635 aa3.43□□□□□ -1.86
NFIA-210ENST00000479364 AHNAK2Q8IVF2 5795 aa3.43□□□□□ -1.86
NFIA-210ENST00000479364 KRTAP5-10Q6L8G5 202 aa3.38□□□□□ -1.87
NFIA-210ENST00000479364 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
NFIA-210ENST00000479364 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
NFIA-210ENST00000479364 MT3P25713 68 aa3.32□□□□□ -1.88
NFIA-210ENST00000479364 KRTAP5-4Q6L8H1 288 aa3.32□□□□□ -1.88
NFIA-210ENST00000479364 KRTAP5-7Q6L8G8 165 aa3.31□□□□□ -1.88
NFIA-210ENST00000479364 MT4P47944 62 aa3.24□□□□□ -1.89
NFIA-210ENST00000479364 KRTAP6-2Q3LI66 62 aa3.23□□□□□ -1.89
NFIA-210ENST00000479364 SYNE1Q8NF91 8797 aaKnown RBP3.2□□□□□ -1.9
NFIA-210ENST00000479364 KRTAP20-2Q3LI61 65 aa3.07□□□□□ -1.92
NFIA-210ENST00000479364 KRTAP5-2Q701N4 177 aa3.07□□□□□ -1.92
NFIA-210ENST00000479364 PRM1P04553 51 aa2.99□□□□□ -1.93
NFIA-210ENST00000479364 AHNAKQ09666 5890 aaKnown RBP2.98□□□□□ -1.93
NFIA-210ENST00000479364 MUC5ACP98088 5654 aa2.93□□□□□ -1.94
NFIA-210ENST00000479364 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
NFIA-210ENST00000479364 MUC5BQ9HC84 5762 aaPredicted RBP2.9□□□□□ -1.94
NFIA-210ENST00000479364 LCE1EQ5T753 118 aa2.85□□□□□ -1.95
NFIA-210ENST00000479364 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
NFIA-210ENST00000479364 OBSCNQ5VST9 7968 aa2.81□□□□□ -1.96
NFIA-210ENST00000479364 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
NFIA-210ENST00000479364 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.66□□□□□ -1.98
NFIA-210ENST00000479364 LCE1CQ5T751 118 aa2.62□□□□□ -1.99
NFIA-210ENST00000479364 LCE1BQ5T7P3 118 aa2.62□□□□□ -1.99
NFIA-210ENST00000479364 KRTAP5-1Q6L8H4 278 aa2.58□□□□□ -2
NFIA-210ENST00000479364 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
NFIA-210ENST00000479364 KRTAP4-4Q9BYR3 166 aa2.24□□□□□ -2.05
NFIA-210ENST00000479364 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
NFIA-210ENST00000479364 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
NFIA-210ENST00000479364 MUC19Q7Z5P9 8384 aa1.62□□□□□ -2.15
NFIA-210ENST00000479364 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 55.6 ms