RNA–Protein interactions for RNA: ENST00000478454.5

CCNL1-220, Transcript of cyclin L1, humanhuman

TSL 4

Gene CCNL1, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-220ENST00000478454 IGLV5-48A0A075B6I7 105 aa0.63□□□□□ -2.31
CCNL1-220ENST00000478454 A0A096LPF7 62 aa0.63□□□□□ -2.31
CCNL1-220ENST00000478454 NOP10Q9NPE3 64 aaKnown RBP0.63□□□□□ -2.31
CCNL1-220ENST00000478454 DYNC1H1Q14204 4646 aaKnown RBP0.63□□□□□ -2.31
CCNL1-220ENST00000478454 MUC5BQ9HC84 5762 aaPredicted RBP0.63□□□□□ -2.31
CCNL1-220ENST00000478454 MMP24-AS1A0A0U1RRL7 71 aa0.62□□□□□ -2.31
CCNL1-220ENST00000478454 SPINK1P00995 79 aa0.62□□□□□ -2.31
CCNL1-220ENST00000478454 PKHD1L1Q86WI1 4243 aa0.62□□□□□ -2.31
CCNL1-220ENST00000478454 M0QY20 66 aa0.61□□□□□ -2.31
CCNL1-220ENST00000478454 APELAP0DMC3 54 aa0.61□□□□□ -2.31
CCNL1-220ENST00000478454 POLR2KP53803 58 aaKnown RBP0.61□□□□□ -2.31
CCNL1-220ENST00000478454 RPS29P62273 56 aaKnown RBP0.61□□□□□ -2.31
CCNL1-220ENST00000478454 RPL39P62891 51 aaKnown RBP0.61□□□□□ -2.31
CCNL1-220ENST00000478454 TNXBP22105 4242 aa0.61□□□□□ -2.31
CCNL1-220ENST00000478454 MYCBP2O75592 4640 aa0.61□□□□□ -2.31
CCNL1-220ENST00000478454 FAT4Q6V0I7 4981 aa0.6□□□□□ -2.31
CCNL1-220ENST00000478454 MT1HL1P0DM35 61 aa0.6□□□□□ -2.31
CCNL1-220ENST00000478454 FAT1Q14517 4588 aa0.6□□□□□ -2.31
CCNL1-220ENST00000478454 DEFB4AO15263 64 aa0.59□□□□□ -2.31
CCNL1-220ENST00000478454 KRTAP2-3P0C7H8 128 aa0.59□□□□□ -2.31
CCNL1-220ENST00000478454 KRTAP2-4Q9BYR9 128 aa0.59□□□□□ -2.31
CCNL1-220ENST00000478454 FLGP20930 4061 aaPredicted RBP0.59□□□□□ -2.32
CCNL1-220ENST00000478454 FAT3Q8TDW7 4589 aa0.59□□□□□ -2.32
CCNL1-220ENST00000478454 KMT2DO14686 5537 aa0.58□□□□□ -2.32
CCNL1-220ENST00000478454 LRP1Q07954 4544 aaKnown RBP0.58□□□□□ -2.32
CCNL1-220ENST00000478454 M0R2T5 61 aa0.58□□□□□ -2.32
CCNL1-220ENST00000478454 DEFB1P60022 68 aa0.58□□□□□ -2.32
CCNL1-220ENST00000478454 RPL39LQ96EH5 51 aaKnown RBP0.58□□□□□ -2.32
CCNL1-220ENST00000478454 HTN1P15515 57 aa0.57□□□□□ -2.32
CCNL1-220ENST00000478454 HTN3P15516 51 aa0.57□□□□□ -2.32
CCNL1-220ENST00000478454 RNF213Q63HN8 5207 aa0.56□□□□□ -2.32
CCNL1-220ENST00000478454 A0A096LNI7 61 aa0.56□□□□□ -2.32
CCNL1-220ENST00000478454 TOMM7Q9P0U1 55 aa0.56□□□□□ -2.32
CCNL1-220ENST00000478454 LRP2P98164 4655 aa0.56□□□□□ -2.32
CCNL1-220ENST00000478454 SMR3BP02814 79 aaPredicted RBP0.55□□□□□ -2.32
CCNL1-220ENST00000478454 MUC5ACP98088 5654 aa0.55□□□□□ -2.32
CCNL1-220ENST00000478454 CLPSL2Q6UWE3 100 aa0.54□□□□□ -2.32
CCNL1-220ENST00000478454 KRTAP2-1Q9BYU5 128 aa0.54□□□□□ -2.32
CCNL1-220ENST00000478454 MUC17Q685J3 4493 aa0.54□□□□□ -2.32
CCNL1-220ENST00000478454 HMCN2Q8NDA2 5059 aa0.54□□□□□ -2.32
CCNL1-220ENST00000478454 KRTAP19-2Q3LHN2 52 aa0.53□□□□□ -2.32
CCNL1-220ENST00000478454 KRTAP19-3Q7Z4W3 81 aa0.52□□□□□ -2.33
CCNL1-220ENST00000478454 MDN1Q9NU22 5596 aa0.51□□□□□ -2.33
CCNL1-220ENST00000478454 M0QZ58 72 aa0.51□□□□□ -2.33
CCNL1-220ENST00000478454 C9orf92A6NGG3 77 aa0.5□□□□□ -2.33
CCNL1-220ENST00000478454 MT1HP80294 61 aa0.5□□□□□ -2.33
CCNL1-220ENST00000478454 KRTAP19-6Q3LI70 58 aa0.5□□□□□ -2.33
CCNL1-220ENST00000478454 LPAP08519 4548 aa0.49□□□□□ -2.33
CCNL1-220ENST00000478454 PRM1P04553 51 aa0.49□□□□□ -2.33
CCNL1-220ENST00000478454 TNP1P09430 55 aa0.48□□□□□ -2.33
CCNL1-220ENST00000478454 KRTAP19-8Q3LI54 63 aa0.47□□□□□ -2.33
CCNL1-220ENST00000478454 SPRR2GQ9BYE4 73 aa0.47□□□□□ -2.33
CCNL1-220ENST00000478454 MT2AP02795 61 aa0.46□□□□□ -2.34
CCNL1-220ENST00000478454 MT1FP04733 61 aa0.44□□□□□ -2.34
CCNL1-220ENST00000478454 USH2AO75445 5202 aa0.44□□□□□ -2.34
CCNL1-220ENST00000478454 MT1BP07438 61 aa0.43□□□□□ -2.34
CCNL1-220ENST00000478454 MUC12Q9UKN1 5478 aa0.42□□□□□ -2.34
CCNL1-220ENST00000478454 KRTAP21-1Q3LI58 79 aa0.41□□□□□ -2.34
CCNL1-220ENST00000478454 SYNE1Q8NF91 8797 aaKnown RBP0.41□□□□□ -2.34
CCNL1-220ENST00000478454 PHGR1C9JFL3 82 aa0.39□□□□□ -2.35
CCNL1-220ENST00000478454 SPRR2DP22532 72 aa0.39□□□□□ -2.35
CCNL1-220ENST00000478454 MT1XP80297 61 aa0.39□□□□□ -2.35
CCNL1-220ENST00000478454 MT1GP13640 62 aa0.38□□□□□ -2.35
CCNL1-220ENST00000478454 SPRR2BP35325 72 aa0.37□□□□□ -2.35
CCNL1-220ENST00000478454 KRTAP8-1Q8IUC2 63 aa0.37□□□□□ -2.35
CCNL1-220ENST00000478454 SPRR2EP22531 72 aa0.36□□□□□ -2.35
CCNL1-220ENST00000478454 SPRR2AP35326 72 aa0.36□□□□□ -2.35
CCNL1-220ENST00000478454 KRTAP19-7Q3SYF9 63 aa0.36□□□□□ -2.35
CCNL1-220ENST00000478454 SPRR2FQ96RM1 72 aa0.36□□□□□ -2.35
CCNL1-220ENST00000478454 MT1EP04732 61 aa0.35□□□□□ -2.35
CCNL1-220ENST00000478454 MT1MQ8N339 61 aa0.35□□□□□ -2.35
CCNL1-220ENST00000478454 MT1LQ93083 61 aa0.35□□□□□ -2.35
CCNL1-220ENST00000478454 MT4P47944 62 aa0.33□□□□□ -2.36
CCNL1-220ENST00000478454 KRTAP6-2Q3LI66 62 aa0.33□□□□□ -2.36
CCNL1-220ENST00000478454 MT1AP04731 61 aa0.32□□□□□ -2.36
CCNL1-220ENST00000478454 KRTAP20-2Q3LI61 65 aa0.31□□□□□ -2.36
CCNL1-220ENST00000478454 KRTAP19-5Q3LI72 72 aa0.31□□□□□ -2.36
CCNL1-220ENST00000478454 KRTAP6-1Q3LI64 71 aa0.26□□□□□ -2.37
Retrieved 78 of 20,778 RNA–protein pairs in 68.5 ms