RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 KRTAP19-4Q3LI73 84 aa4.26□□□□□ -1.73
PRPF39-203ENST00000477626 LCE5AQ5TCM9 118 aa4.23□□□□□ -1.73
PRPF39-203ENST00000477626 KRTAP6-3Q3LI67 103 aa4.22□□□□□ -1.73
PRPF39-203ENST00000477626 KRTAP9-6A8MVA2 160 aa4.22□□□□□ -1.73
PRPF39-203ENST00000477626 SPRR2FQ96RM1 72 aa4.21□□□□□ -1.73
PRPF39-203ENST00000477626 KRTAP4-7Q9BYR0 210 aa4.2□□□□□ -1.74
PRPF39-203ENST00000477626 KRTAP19-3Q7Z4W3 81 aa4.2□□□□□ -1.74
PRPF39-203ENST00000477626 MDN1Q9NU22 5596 aa4.19□□□□□ -1.74
PRPF39-203ENST00000477626 KRTAP9-7A8MTY7 169 aa4.17□□□□□ -1.74
PRPF39-203ENST00000477626 MT1MQ8N339 61 aa4.15□□□□□ -1.74
PRPF39-203ENST00000477626 LCE1AQ5T7P2 110 aa4.13□□□□□ -1.75
PRPF39-203ENST00000477626 MT1GP13640 62 aa4.12□□□□□ -1.75
PRPF39-203ENST00000477626 KRTAP4-3Q9BYR4 195 aa4.08□□□□□ -1.76
PRPF39-203ENST00000477626 NEBP20929 6669 aa4.07□□□□□ -1.76
PRPF39-203ENST00000477626 SPRR2EP22531 72 aa4.04□□□□□ -1.76
PRPF39-203ENST00000477626 SPRR2BP35325 72 aa4.04□□□□□ -1.76
PRPF39-203ENST00000477626 SPRR2AP35326 72 aa4.04□□□□□ -1.76
PRPF39-203ENST00000477626 KRTAP5-5Q701N2 237 aaPredicted RBP3.96□□□□□ -1.78
PRPF39-203ENST00000477626 LOC100996750A0A140TA64 210 aa3.95□□□□□ -1.78
PRPF39-203ENST00000477626 NDUFAF8A1L188 74 aa3.91□□□□□ -1.78
PRPF39-203ENST00000477626 KRTAP2-3P0C7H8 128 aa3.91□□□□□ -1.78
PRPF39-203ENST00000477626 KRTAP2-4Q9BYR9 128 aa3.91□□□□□ -1.78
PRPF39-203ENST00000477626 KRTAP2-1Q9BYU5 128 aa3.91□□□□□ -1.78
PRPF39-203ENST00000477626 DSTQ03001 7570 aaKnown RBP3.9□□□□□ -1.79
PRPF39-203ENST00000477626 SPRR2DP22532 72 aa3.89□□□□□ -1.79
PRPF39-203ENST00000477626 LCE3BQ5TA77 95 aa3.76□□□□□ -1.81
PRPF39-203ENST00000477626 LUZP6Q538Z0 58 aa3.76□□□□□ -1.81
PRPF39-203ENST00000477626 KRTAP5-4Q6L8H1 288 aa3.71□□□□□ -1.81
PRPF39-203ENST00000477626 KRTAP20-1Q3LI63 56 aa3.67□□□□□ -1.82
PRPF39-203ENST00000477626 KRTAP6-1Q3LI64 71 aa3.67□□□□□ -1.82
PRPF39-203ENST00000477626 MT1AP04731 61 aa3.66□□□□□ -1.82
PRPF39-203ENST00000477626 KRTAP2-2Q9BYT5 123 aa3.61□□□□□ -1.83
PRPF39-203ENST00000477626 KRTAP9-4Q9BYQ2 154 aa3.5□□□□□ -1.85
PRPF39-203ENST00000477626 SYNE1Q8NF91 8797 aaKnown RBP3.46□□□□□ -1.86
PRPF39-203ENST00000477626 LCE4AQ5TA78 99 aa3.44□□□□□ -1.86
PRPF39-203ENST00000477626 H3BS24 57 aa3.44□□□□□ -1.86
PRPF39-203ENST00000477626 KRTAP4-9Q9BYQ8 210 aa3.43□□□□□ -1.86
PRPF39-203ENST00000477626 KRTAP5-2Q701N4 177 aa3.41□□□□□ -1.86
PRPF39-203ENST00000477626 KRTAP4-6Q9BYQ5 205 aa3.41□□□□□ -1.86
PRPF39-203ENST00000477626 MT4P47944 62 aa3.4□□□□□ -1.87
PRPF39-203ENST00000477626 HMCN1Q96RW7 5635 aa3.39□□□□□ -1.87
PRPF39-203ENST00000477626 LCE1DQ5T752 114 aa3.39□□□□□ -1.87
PRPF39-203ENST00000477626 KRTAP5-3Q6L8H2 238 aa3.34□□□□□ -1.87
PRPF39-203ENST00000477626 KRTAP20-2Q3LI61 65 aa3.33□□□□□ -1.88
PRPF39-203ENST00000477626 KRTAP6-2Q3LI66 62 aa3.31□□□□□ -1.88
PRPF39-203ENST00000477626 KRTAP12-4P60329 112 aa3.3□□□□□ -1.88
PRPF39-203ENST00000477626 INE1O15225 51 aa3.27□□□□□ -1.89
PRPF39-203ENST00000477626 A0A0A0MQY5 61 aa3.23□□□□□ -1.89
PRPF39-203ENST00000477626 MT3P25713 68 aa3.2□□□□□ -1.9
PRPF39-203ENST00000477626 LCE3DQ9BYE3 92 aa3.09□□□□□ -1.91
PRPF39-203ENST00000477626 AHNAK2Q8IVF2 5795 aa3.07□□□□□ -1.92
PRPF39-203ENST00000477626 LCE3EQ5T5B0 92 aa3.02□□□□□ -1.93
PRPF39-203ENST00000477626 LCE1EQ5T753 118 aa2.93□□□□□ -1.94
PRPF39-203ENST00000477626 OBSCNQ5VST9 7968 aa2.92□□□□□ -1.94
PRPF39-203ENST00000477626 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
PRPF39-203ENST00000477626 KRTAP5-1Q6L8H4 278 aa2.91□□□□□ -1.94
PRPF39-203ENST00000477626 KRTAP4-11Q9BYQ6 195 aa2.88□□□□□ -1.95
PRPF39-203ENST00000477626 KRTAP5-7Q6L8G8 165 aa2.88□□□□□ -1.95
PRPF39-203ENST00000477626 KRTAP5-8O75690 187 aa2.84□□□□□ -1.95
PRPF39-203ENST00000477626 GPR98Q8WXG9 6306 aa2.81□□□□□ -1.96
PRPF39-203ENST00000477626 KRTAP4-2Q9BYR5 136 aa2.79□□□□□ -1.96
PRPF39-203ENST00000477626 MUC5ACP98088 5654 aa2.78□□□□□ -1.96
PRPF39-203ENST00000477626 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
PRPF39-203ENST00000477626 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
PRPF39-203ENST00000477626 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-203ENST00000477626 PRM1P04553 51 aa2.67□□□□□ -1.98
PRPF39-203ENST00000477626 KRTAP21-2Q3LI59 83 aa2.5□□□□□ -2.01
PRPF39-203ENST00000477626 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
PRPF39-203ENST00000477626 KRTAP9-9Q9BYP9 154 aa2.48□□□□□ -2.01
PRPF39-203ENST00000477626 KRTAP5-11Q6L8G4 156 aa2.43□□□□□ -2.02
PRPF39-203ENST00000477626 KRTAP4-12Q9BQ66 201 aa2.33□□□□□ -2.04
PRPF39-203ENST00000477626 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
PRPF39-203ENST00000477626 LCE1FQ5T754 118 aa2.14□□□□□ -2.07
PRPF39-203ENST00000477626 PHGR1C9JFL3 82 aa2.1□□□□□ -2.07
PRPF39-203ENST00000477626 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
PRPF39-203ENST00000477626 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
PRPF39-203ENST00000477626 MUC19Q7Z5P9 8384 aa1.72□□□□□ -2.13
PRPF39-203ENST00000477626 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 87.3 ms