RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 MDN1Q9NU22 5596 aa6.32□□□□□ -1.4
EPHB4-204ENST00000477446 NDUFAF8A1L188 74 aa6.31□□□□□ -1.4
EPHB4-204ENST00000477446 LUZP6Q538Z0 58 aa6.31□□□□□ -1.4
EPHB4-204ENST00000477446 KRTAP12-3P60328 96 aa6.3□□□□□ -1.4
EPHB4-204ENST00000477446 SPRR5A0A1B0GTR4 108 aa6.29□□□□□ -1.4
EPHB4-204ENST00000477446 KRTAP19-7Q3SYF9 63 aa6.28□□□□□ -1.4
EPHB4-204ENST00000477446 KRTAP19-5Q3LI72 72 aa6.24□□□□□ -1.41
EPHB4-204ENST00000477446 SPRR2EP22531 72 aa6.23□□□□□ -1.41
EPHB4-204ENST00000477446 SPRR2BP35325 72 aa6.23□□□□□ -1.41
EPHB4-204ENST00000477446 SPRR2AP35326 72 aa6.23□□□□□ -1.41
EPHB4-204ENST00000477446 LCE1AQ5T7P2 110 aa6.22□□□□□ -1.41
EPHB4-204ENST00000477446 MT1EP04732 61 aa6.2□□□□□ -1.42
EPHB4-204ENST00000477446 KRTAP2-3P0C7H8 128 aa6.19□□□□□ -1.42
EPHB4-204ENST00000477446 KRTAP2-4Q9BYR9 128 aa6.19□□□□□ -1.42
EPHB4-204ENST00000477446 KRTAP19-3Q7Z4W3 81 aa6.05□□□□□ -1.44
EPHB4-204ENST00000477446 KRTAP19-4Q3LI73 84 aa6.02□□□□□ -1.45
EPHB4-204ENST00000477446 LCE5AQ5TCM9 118 aa6.01□□□□□ -1.45
EPHB4-204ENST00000477446 SPRR2DP22532 72 aa6.01□□□□□ -1.45
EPHB4-204ENST00000477446 MT1LQ93083 61 aa6□□□□□ -1.45
EPHB4-204ENST00000477446 KRTAP2-2Q9BYT5 123 aa5.97□□□□□ -1.45
EPHB4-204ENST00000477446 KRTAP2-1Q9BYU5 128 aa5.97□□□□□ -1.45
EPHB4-204ENST00000477446 MT1GP13640 62 aa5.96□□□□□ -1.46
EPHB4-204ENST00000477446 LCE3CQ5T5A8 94 aa5.92□□□□□ -1.46
EPHB4-204ENST00000477446 MT1MQ8N339 61 aa5.87□□□□□ -1.47
EPHB4-204ENST00000477446 LCE3BQ5TA77 95 aa5.81□□□□□ -1.48
EPHB4-204ENST00000477446 DSTQ03001 7570 aaKnown RBP5.77□□□□□ -1.49
EPHB4-204ENST00000477446 KRTAP4-7Q9BYR0 210 aa5.76□□□□□ -1.49
EPHB4-204ENST00000477446 KRTAP4-3Q9BYR4 195 aa5.74□□□□□ -1.49
EPHB4-204ENST00000477446 GPR98Q8WXG9 6306 aa5.59□□□□□ -1.52
EPHB4-204ENST00000477446 KRTAP9-6A8MVA2 160 aa5.53□□□□□ -1.52
EPHB4-204ENST00000477446 LOC100996750A0A140TA64 210 aa5.43□□□□□ -1.54
EPHB4-204ENST00000477446 KRTAP4-9Q9BYQ8 210 aa5.43□□□□□ -1.54
EPHB4-204ENST00000477446 KRTAP5-5Q701N2 237 aaPredicted RBP5.34□□□□□ -1.55
EPHB4-204ENST00000477446 KRTAP5-4Q6L8H1 288 aa5.33□□□□□ -1.56
EPHB4-204ENST00000477446 LCE4AQ5TA78 99 aa5.33□□□□□ -1.56
EPHB4-204ENST00000477446 INE1O15225 51 aa5.32□□□□□ -1.56
EPHB4-204ENST00000477446 LCE1DQ5T752 114 aa5.26□□□□□ -1.57
EPHB4-204ENST00000477446 MT4P47944 62 aa5.24□□□□□ -1.57
EPHB4-204ENST00000477446 HMCN1Q96RW7 5635 aa5.16□□□□□ -1.58
EPHB4-204ENST00000477446 KRTAP4-6Q9BYQ5 205 aa5.15□□□□□ -1.59
EPHB4-204ENST00000477446 MT1AP04731 61 aa5.1□□□□□ -1.59
EPHB4-204ENST00000477446 AHNAK2Q8IVF2 5795 aa5.08□□□□□ -1.6
EPHB4-204ENST00000477446 KRTAP12-4P60329 112 aa5.08□□□□□ -1.6
EPHB4-204ENST00000477446 SYNE1Q8NF91 8797 aaKnown RBP5.07□□□□□ -1.6
EPHB4-204ENST00000477446 KRTAP6-1Q3LI64 71 aa5.06□□□□□ -1.6
EPHB4-204ENST00000477446 KRTAP5-10Q6L8G5 202 aa5.04□□□□□ -1.6
EPHB4-204ENST00000477446 KRTAP20-2Q3LI61 65 aa5□□□□□ -1.61
EPHB4-204ENST00000477446 KRTAP5-7Q6L8G8 165 aa4.9□□□□□ -1.63
EPHB4-204ENST00000477446 KRTAP9-4Q9BYQ2 154 aa4.9□□□□□ -1.63
EPHB4-204ENST00000477446 KRTAP5-3Q6L8H2 238 aa4.86□□□□□ -1.63
EPHB4-204ENST00000477446 KRTAP6-2Q3LI66 62 aa4.75□□□□□ -1.65
EPHB4-204ENST00000477446 KRTAP5-2Q701N4 177 aa4.75□□□□□ -1.65
EPHB4-204ENST00000477446 MT3P25713 68 aa4.65□□□□□ -1.67
EPHB4-204ENST00000477446 LCE3DQ9BYE3 92 aa4.51□□□□□ -1.69
EPHB4-204ENST00000477446 KRTAP4-11Q9BYQ6 195 aa4.46□□□□□ -1.7
EPHB4-204ENST00000477446 LCE3EQ5T5B0 92 aa4.44□□□□□ -1.7
EPHB4-204ENST00000477446 OBSCNQ5VST9 7968 aa4.42□□□□□ -1.7
EPHB4-204ENST00000477446 KRTAP5-8O75690 187 aa4.31□□□□□ -1.72
EPHB4-204ENST00000477446 MUC5ACP98088 5654 aa4.26□□□□□ -1.73
EPHB4-204ENST00000477446 AHNAKQ09666 5890 aaKnown RBP4.26□□□□□ -1.73
EPHB4-204ENST00000477446 MUC5BQ9HC84 5762 aaPredicted RBP4.21□□□□□ -1.73
EPHB4-204ENST00000477446 KRTAP5-1Q6L8H4 278 aa4.19□□□□□ -1.74
EPHB4-204ENST00000477446 LCE1EQ5T753 118 aa4.16□□□□□ -1.74
EPHB4-204ENST00000477446 KRTAP9-9Q9BYP9 154 aa4.14□□□□□ -1.75
EPHB4-204ENST00000477446 PRM1P04553 51 aa3.97□□□□□ -1.77
EPHB4-204ENST00000477446 LCE1BQ5T7P3 118 aa3.89□□□□□ -1.79
EPHB4-204ENST00000477446 KRTAP4-2Q9BYR5 136 aa3.89□□□□□ -1.79
EPHB4-204ENST00000477446 LCE1CQ5T751 118 aa3.86□□□□□ -1.79
EPHB4-204ENST00000477446 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.57□□□□□ -1.84
EPHB4-204ENST00000477446 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
EPHB4-204ENST00000477446 KRTAP5-11Q6L8G4 156 aa3.45□□□□□ -1.86
EPHB4-204ENST00000477446 KRTAP4-12Q9BQ66 201 aa3.38□□□□□ -1.87
EPHB4-204ENST00000477446 KRTAP21-2Q3LI59 83 aa3.33□□□□□ -1.88
EPHB4-204ENST00000477446 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
EPHB4-204ENST00000477446 PHGR1C9JFL3 82 aa2.98□□□□□ -1.93
EPHB4-204ENST00000477446 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
EPHB4-204ENST00000477446 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
EPHB4-204ENST00000477446 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 90.2 ms