RNA–Protein interactions for RNA: ENST00000477054.6

GSDMB-208, Transcript of gasdermin B, humanhuman

TSL 5

Gene GSDMB, Length 4,655 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-208ENST00000477054 SPRR2EP22531 72 aa3.16□□□□□ -1.9
GSDMB-208ENST00000477054 SPRR2BP35325 72 aa3.16□□□□□ -1.9
GSDMB-208ENST00000477054 SPRR2AP35326 72 aa3.16□□□□□ -1.9
GSDMB-208ENST00000477054 KRTAP2-3P0C7H8 128 aa3.14□□□□□ -1.91
GSDMB-208ENST00000477054 KRTAP2-4Q9BYR9 128 aa3.14□□□□□ -1.91
GSDMB-208ENST00000477054 KRTAP2-1Q9BYU5 128 aa3.14□□□□□ -1.91
GSDMB-208ENST00000477054 MT1MQ8N339 61 aa3.11□□□□□ -1.91
GSDMB-208ENST00000477054 GPR98Q8WXG9 6306 aa3.09□□□□□ -1.91
GSDMB-208ENST00000477054 SPRR2DP22532 72 aa3.05□□□□□ -1.92
GSDMB-208ENST00000477054 LOC100996750A0A140TA64 210 aa3.03□□□□□ -1.92
GSDMB-208ENST00000477054 KRTAP4-3Q9BYR4 195 aa3.03□□□□□ -1.92
GSDMB-208ENST00000477054 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
GSDMB-208ENST00000477054 KRTAP9-6A8MVA2 160 aa2.99□□□□□ -1.93
GSDMB-208ENST00000477054 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
GSDMB-208ENST00000477054 FSIP2Q5CZC0 6907 aa2.94□□□□□ -1.94
GSDMB-208ENST00000477054 PRM1P04553 51 aa2.93□□□□□ -1.94
GSDMB-208ENST00000477054 LCE5AQ5TCM9 118 aa2.93□□□□□ -1.94
GSDMB-208ENST00000477054 MACF1Q9UPN3 7388 aaKnown RBP2.92□□□□□ -1.94
GSDMB-208ENST00000477054 KRTAP9-6A0A140TA67 174 aa2.92□□□□□ -1.94
GSDMB-208ENST00000477054 KRTAP2-2Q9BYT5 123 aa2.92□□□□□ -1.94
GSDMB-208ENST00000477054 KRTAP9-2Q9BYQ4 174 aa2.9□□□□□ -1.95
GSDMB-208ENST00000477054 USH2AO75445 5202 aa2.89□□□□□ -1.95
GSDMB-208ENST00000477054 MT1AP04731 61 aa2.87□□□□□ -1.95
GSDMB-208ENST00000477054 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
GSDMB-208ENST00000477054 MT3P25713 68 aa2.83□□□□□ -1.96
GSDMB-208ENST00000477054 KMT2DO14686 5537 aa2.81□□□□□ -1.96
GSDMB-208ENST00000477054 LCE1EQ5T753 118 aa2.8□□□□□ -1.96
GSDMB-208ENST00000477054 LCE1AQ5T7P2 110 aa2.77□□□□□ -1.97
GSDMB-208ENST00000477054 KRTAP9-4Q9BYQ2 154 aa2.77□□□□□ -1.97
GSDMB-208ENST00000477054 KRTAP4-9Q9BYQ8 210 aa2.76□□□□□ -1.97
GSDMB-208ENST00000477054 SYNE1Q8NF91 8797 aaKnown RBP2.75□□□□□ -1.97
GSDMB-208ENST00000477054 KRTAP6-1Q3LI64 71 aa2.75□□□□□ -1.97
GSDMB-208ENST00000477054 KRTAP9-7A8MTY7 169 aa2.69□□□□□ -1.98
GSDMB-208ENST00000477054 MT4P47944 62 aa2.66□□□□□ -1.98
GSDMB-208ENST00000477054 KRTAP6-3Q3LI67 103 aa2.66□□□□□ -1.98
GSDMB-208ENST00000477054 KRTAP20-1Q3LI63 56 aa2.65□□□□□ -1.99
GSDMB-208ENST00000477054 SSPOA2VEC9 5147 aa2.64□□□□□ -1.99
GSDMB-208ENST00000477054 LCE1DQ5T752 114 aa2.64□□□□□ -1.99
GSDMB-208ENST00000477054 SYNE2Q8WXH0 6885 aaKnown RBP2.64□□□□□ -1.99
GSDMB-208ENST00000477054 FCGBPQ9Y6R7 5405 aaPredicted RBP2.62□□□□□ -1.99
GSDMB-208ENST00000477054 KRTAP6-2Q3LI66 62 aa2.6□□□□□ -1.99
GSDMB-208ENST00000477054 LCE4AQ5TA78 99 aa2.58□□□□□ -2
GSDMB-208ENST00000477054 KRTAP9-9Q9BYP9 154 aa2.58□□□□□ -2
GSDMB-208ENST00000477054 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.57□□□□□ -2
GSDMB-208ENST00000477054 DSTQ03001 7570 aaKnown RBP2.57□□□□□ -2
GSDMB-208ENST00000477054 KRTAP5-9P26371 169 aa2.55□□□□□ -2
GSDMB-208ENST00000477054 MUC12Q9UKN1 5478 aa2.54□□□□□ -2
GSDMB-208ENST00000477054 OBSCNQ5VST9 7968 aa2.54□□□□□ -2
GSDMB-208ENST00000477054 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
GSDMB-208ENST00000477054 KRTAP5-5Q701N2 237 aaPredicted RBP2.38□□□□□ -2.03
GSDMB-208ENST00000477054 NEBP20929 6669 aa2.32□□□□□ -2.04
GSDMB-208ENST00000477054 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
GSDMB-208ENST00000477054 MDN1Q9NU22 5596 aa2.28□□□□□ -2.05
GSDMB-208ENST00000477054 KRTAP4-6Q9BYQ5 205 aa2.26□□□□□ -2.05
GSDMB-208ENST00000477054 KRTAP20-2Q3LI61 65 aa2.24□□□□□ -2.05
GSDMB-208ENST00000477054 LCE1CQ5T751 118 aa2.14□□□□□ -2.07
GSDMB-208ENST00000477054 KRTAP4-11Q9BYQ6 195 aa2.13□□□□□ -2.07
GSDMB-208ENST00000477054 KRTAP5-4Q6L8H1 288 aa2.12□□□□□ -2.07
GSDMB-208ENST00000477054 KRTAP4-2Q9BYR5 136 aa1.96□□□□□ -2.1
GSDMB-208ENST00000477054 KRTAP5-2Q701N4 177 aa1.91□□□□□ -2.1
GSDMB-208ENST00000477054 AHNAK2Q8IVF2 5795 aa1.9□□□□□ -2.11
GSDMB-208ENST00000477054 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.11
GSDMB-208ENST00000477054 KRTAP5-3Q6L8H2 238 aa1.85□□□□□ -2.11
GSDMB-208ENST00000477054 KRTAP4-4Q9BYR3 166 aa1.82□□□□□ -2.12
GSDMB-208ENST00000477054 MUC5ACP98088 5654 aa1.81□□□□□ -2.12
GSDMB-208ENST00000477054 HMCN1Q96RW7 5635 aa1.81□□□□□ -2.12
GSDMB-208ENST00000477054 KRTAP5-10Q6L8G5 202 aa1.78□□□□□ -2.12
GSDMB-208ENST00000477054 KRTAP4-12Q9BQ66 201 aa1.77□□□□□ -2.13
GSDMB-208ENST00000477054 KRTAP5-8O75690 187 aa1.64□□□□□ -2.15
GSDMB-208ENST00000477054 KRTAP5-1Q6L8H4 278 aa1.64□□□□□ -2.15
GSDMB-208ENST00000477054 MUC5BQ9HC84 5762 aaPredicted RBP1.6□□□□□ -2.15
GSDMB-208ENST00000477054 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
GSDMB-208ENST00000477054 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
GSDMB-208ENST00000477054 KRTAP5-11Q6L8G4 156 aa1.57□□□□□ -2.16
GSDMB-208ENST00000477054 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.55□□□□□ -2.16
GSDMB-208ENST00000477054 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
GSDMB-208ENST00000477054 KRTAP5-7Q6L8G8 165 aa1.43□□□□□ -2.18
GSDMB-208ENST00000477054 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 12.5 ms