RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 FAT3Q8TDW7 4589 aa2.13□□□□□ -2.07
SPTLC3-205ENST00000476791 TNP1P09430 55 aa2.12□□□□□ -2.07
SPTLC3-205ENST00000476791 DNAH5Q8TE73 4624 aa2.11□□□□□ -2.07
SPTLC3-205ENST00000476791 FAT4Q6V0I7 4981 aa2.1□□□□□ -2.07
SPTLC3-205ENST00000476791 KRTAP10-4P60372 401 aaPredicted RBP2.09□□□□□ -2.08
SPTLC3-205ENST00000476791 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
SPTLC3-205ENST00000476791 FAT1Q14517 4588 aa2.06□□□□□ -2.08
SPTLC3-205ENST00000476791 RNF213Q63HN8 5207 aa2.06□□□□□ -2.08
SPTLC3-205ENST00000476791 MT1HL1P0DM35 61 aa2.06□□□□□ -2.08
SPTLC3-205ENST00000476791 TNXBP22105 4242 aa2.04□□□□□ -2.08
SPTLC3-205ENST00000476791 KRTAP2-3P0C7H8 128 aa2.02□□□□□ -2.09
SPTLC3-205ENST00000476791 KRTAP2-4Q9BYR9 128 aa2.02□□□□□ -2.09
SPTLC3-205ENST00000476791 KRTAP2-1Q9BYU5 128 aa2.02□□□□□ -2.09
SPTLC3-205ENST00000476791 SMR3BP02814 79 aaPredicted RBP1.98□□□□□ -2.09
SPTLC3-205ENST00000476791 MUC2Q02817 5179 aa1.97□□□□□ -2.09
SPTLC3-205ENST00000476791 MUC17Q685J3 4493 aa1.94□□□□□ -2.1
SPTLC3-205ENST00000476791 SSPOA2VEC9 5147 aa1.93□□□□□ -2.1
SPTLC3-205ENST00000476791 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
SPTLC3-205ENST00000476791 M0R2T5 61 aa1.92□□□□□ -2.1
SPTLC3-205ENST00000476791 LRP2P98164 4655 aa1.91□□□□□ -2.1
SPTLC3-205ENST00000476791 LCE1CQ5T751 118 aa1.9□□□□□ -2.11
SPTLC3-205ENST00000476791 LCE1BQ5T7P3 118 aa1.9□□□□□ -2.11
SPTLC3-205ENST00000476791 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
SPTLC3-205ENST00000476791 KRTAP8-1Q8IUC2 63 aa1.89□□□□□ -2.11
SPTLC3-205ENST00000476791 LRP1Q07954 4544 aaKnown RBP1.87□□□□□ -2.11
SPTLC3-205ENST00000476791 FLGP20930 4061 aaPredicted RBP1.87□□□□□ -2.11
SPTLC3-205ENST00000476791 RPS29P62273 56 aaKnown RBP1.86□□□□□ -2.11
SPTLC3-205ENST00000476791 PRM1P04553 51 aa1.85□□□□□ -2.11
SPTLC3-205ENST00000476791 KRTAP12-3P60328 96 aa1.85□□□□□ -2.11
SPTLC3-205ENST00000476791 KRTAP20-1Q3LI63 56 aa1.84□□□□□ -2.12
SPTLC3-205ENST00000476791 LPAP08519 4548 aa1.83□□□□□ -2.12
SPTLC3-205ENST00000476791 MT1HP80294 61 aa1.76□□□□□ -2.13
SPTLC3-205ENST00000476791 KRTAP19-6Q3LI70 58 aa1.75□□□□□ -2.13
SPTLC3-205ENST00000476791 NEBP20929 6669 aa1.75□□□□□ -2.13
SPTLC3-205ENST00000476791 SYNE1Q8NF91 8797 aaKnown RBP1.73□□□□□ -2.13
SPTLC3-205ENST00000476791 AHNAK2Q8IVF2 5795 aa1.73□□□□□ -2.13
SPTLC3-205ENST00000476791 KRTAP19-2Q3LHN2 52 aa1.72□□□□□ -2.13
SPTLC3-205ENST00000476791 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
SPTLC3-205ENST00000476791 USH2AO75445 5202 aa1.71□□□□□ -2.14
SPTLC3-205ENST00000476791 KRTAP19-5Q3LI72 72 aa1.66□□□□□ -2.14
SPTLC3-205ENST00000476791 FCGBPQ9Y6R7 5405 aaPredicted RBP1.65□□□□□ -2.14
SPTLC3-205ENST00000476791 KRTAP4-1Q9BYQ7 146 aa1.63□□□□□ -2.15
SPTLC3-205ENST00000476791 FSIP2Q5CZC0 6907 aa1.62□□□□□ -2.15
SPTLC3-205ENST00000476791 MACF1Q9UPN3 7388 aaKnown RBP1.61□□□□□ -2.15
SPTLC3-205ENST00000476791 SYNE2Q8WXH0 6885 aaKnown RBP1.6□□□□□ -2.15
SPTLC3-205ENST00000476791 KRTAP5-7Q6L8G8 165 aa1.59□□□□□ -2.16
SPTLC3-205ENST00000476791 MT2AP02795 61 aa1.56□□□□□ -2.16
SPTLC3-205ENST00000476791 KRTAP6-2Q3LI66 62 aa1.53□□□□□ -2.16
SPTLC3-205ENST00000476791 MT1FP04733 61 aa1.5□□□□□ -2.17
SPTLC3-205ENST00000476791 KRTAP19-3Q7Z4W3 81 aa1.48□□□□□ -2.17
SPTLC3-205ENST00000476791 KMT2DO14686 5537 aa1.48□□□□□ -2.17
SPTLC3-205ENST00000476791 SPRR2EP22531 72 aa1.47□□□□□ -2.17
SPTLC3-205ENST00000476791 SPRR2BP35325 72 aa1.47□□□□□ -2.17
SPTLC3-205ENST00000476791 SPRR2AP35326 72 aa1.47□□□□□ -2.17
SPTLC3-205ENST00000476791 KRTAP5-10Q6L8G5 202 aa1.45□□□□□ -2.18
SPTLC3-205ENST00000476791 SPRR2DP22532 72 aa1.45□□□□□ -2.18
SPTLC3-205ENST00000476791 MDN1Q9NU22 5596 aa1.44□□□□□ -2.18
SPTLC3-205ENST00000476791 MT1AP04731 61 aa1.43□□□□□ -2.18
SPTLC3-205ENST00000476791 MUC5ACP98088 5654 aa1.43□□□□□ -2.18
SPTLC3-205ENST00000476791 KRTAP19-8Q3LI54 63 aa1.42□□□□□ -2.18
SPTLC3-205ENST00000476791 MUC12Q9UKN1 5478 aa1.41□□□□□ -2.18
SPTLC3-205ENST00000476791 SPRR2GQ9BYE4 73 aa1.39□□□□□ -2.19
SPTLC3-205ENST00000476791 SPRR2FQ96RM1 72 aa1.38□□□□□ -2.19
SPTLC3-205ENST00000476791 MT1XP80297 61 aa1.37□□□□□ -2.19
SPTLC3-205ENST00000476791 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
SPTLC3-205ENST00000476791 MT1BP07438 61 aa1.34□□□□□ -2.2
SPTLC3-205ENST00000476791 KRTAP21-1Q3LI58 79 aa1.26□□□□□ -2.21
SPTLC3-205ENST00000476791 MT1EP04732 61 aa1.25□□□□□ -2.21
SPTLC3-205ENST00000476791 MT1GP13640 62 aa1.24□□□□□ -2.21
SPTLC3-205ENST00000476791 MT1LQ93083 61 aa1.24□□□□□ -2.21
SPTLC3-205ENST00000476791 KRTAP19-7Q3SYF9 63 aa1.22□□□□□ -2.21
SPTLC3-205ENST00000476791 MT4P47944 62 aa1.16□□□□□ -2.22
SPTLC3-205ENST00000476791 KRTAP20-2Q3LI61 65 aa1.15□□□□□ -2.22
SPTLC3-205ENST00000476791 DSTQ03001 7570 aaKnown RBP1.15□□□□□ -2.23
SPTLC3-205ENST00000476791 KRTAP6-1Q3LI64 71 aa1.08□□□□□ -2.24
SPTLC3-205ENST00000476791 MT1MQ8N339 61 aa1.06□□□□□ -2.24
SPTLC3-205ENST00000476791 PHGR1C9JFL3 82 aa0.81□□□□□ -2.28
SPTLC3-205ENST00000476791 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 2408.2 ms