RNA–Protein interactions for RNA: ENST00000476744.5

CCNL1-218, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-218ENST00000476744 SPRR2GQ9BYE4 73 aa3.37□□□□□ -1.87
CCNL1-218ENST00000476744 MUC2Q02817 5179 aa3.36□□□□□ -1.87
CCNL1-218ENST00000476744 MT1HP80294 61 aa3.34□□□□□ -1.87
CCNL1-218ENST00000476744 PP632Q6XCG6 107 aa3.31□□□□□ -1.88
CCNL1-218ENST00000476744 CAMK2N1Q7Z7J9 78 aa3.28□□□□□ -1.88
CCNL1-218ENST00000476744 MT2AP02795 61 aa3.27□□□□□ -1.89
CCNL1-218ENST00000476744 MT1FP04733 61 aa3.26□□□□□ -1.89
CCNL1-218ENST00000476744 KRTAP19-8Q3LI54 63 aa3.26□□□□□ -1.89
CCNL1-218ENST00000476744 FAT4Q6V0I7 4981 aa3.25□□□□□ -1.89
CCNL1-218ENST00000476744 TNP1P09430 55 aa3.21□□□□□ -1.9
CCNL1-218ENST00000476744 KRTAP5-5Q701N2 237 aaPredicted RBP3.21□□□□□ -1.9
CCNL1-218ENST00000476744 M0R2T5 61 aa3.19□□□□□ -1.9
CCNL1-218ENST00000476744 PLAC4Q8WY50 150 aa3.19□□□□□ -1.9
CCNL1-218ENST00000476744 KRTAP10-10P60014 251 aa3.17□□□□□ -1.9
CCNL1-218ENST00000476744 MT1BP07438 61 aa3.16□□□□□ -1.9
CCNL1-218ENST00000476744 FSIP2Q5CZC0 6907 aa3.12□□□□□ -1.91
CCNL1-218ENST00000476744 MT1XP80297 61 aa3.11□□□□□ -1.91
CCNL1-218ENST00000476744 SPRR5A0A1B0GTR4 108 aa3.1□□□□□ -1.91
CCNL1-218ENST00000476744 CRCT1Q9UGL9 99 aa3.09□□□□□ -1.91
CCNL1-218ENST00000476744 KRTAP8-1Q8IUC2 63 aa3.08□□□□□ -1.92
CCNL1-218ENST00000476744 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
CCNL1-218ENST00000476744 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
CCNL1-218ENST00000476744 KRTAP5-2Q701N4 177 aa3.04□□□□□ -1.92
CCNL1-218ENST00000476744 LCE3DQ9BYE3 92 aa3.04□□□□□ -1.92
CCNL1-218ENST00000476744 PRO2289Q9P1D8 64 aa3□□□□□ -1.93
CCNL1-218ENST00000476744 LUZP6Q538Z0 58 aa2.94□□□□□ -1.94
CCNL1-218ENST00000476744 KRTAP12-3P60328 96 aa2.92□□□□□ -1.94
CCNL1-218ENST00000476744 USH2AO75445 5202 aa2.89□□□□□ -1.95
CCNL1-218ENST00000476744 KRTAP19-6Q3LI70 58 aa2.81□□□□□ -1.96
CCNL1-218ENST00000476744 KRTAP19-5Q3LI72 72 aa2.81□□□□□ -1.96
CCNL1-218ENST00000476744 SSPOA2VEC9 5147 aa2.81□□□□□ -1.96
CCNL1-218ENST00000476744 KRTAP19-7Q3SYF9 63 aa2.78□□□□□ -1.96
CCNL1-218ENST00000476744 FCGBPQ9Y6R7 5405 aaPredicted RBP2.78□□□□□ -1.97
CCNL1-218ENST00000476744 SYNE2Q8WXH0 6885 aaKnown RBP2.77□□□□□ -1.97
CCNL1-218ENST00000476744 MACF1Q9UPN3 7388 aaKnown RBP2.73□□□□□ -1.97
CCNL1-218ENST00000476744 MT1EP04732 61 aa2.71□□□□□ -1.98
CCNL1-218ENST00000476744 MT1LQ93083 61 aa2.69□□□□□ -1.98
CCNL1-218ENST00000476744 KMT2DO14686 5537 aa2.65□□□□□ -1.98
CCNL1-218ENST00000476744 INE1O15225 51 aa2.6□□□□□ -1.99
CCNL1-218ENST00000476744 KRTAP6-3Q3LI67 103 aa2.6□□□□□ -1.99
CCNL1-218ENST00000476744 NEBP20929 6669 aa2.59□□□□□ -1.99
CCNL1-218ENST00000476744 KRTAP2-3P0C7H8 128 aa2.58□□□□□ -2
CCNL1-218ENST00000476744 KRTAP2-4Q9BYR9 128 aa2.58□□□□□ -2
CCNL1-218ENST00000476744 KRTAP2-1Q9BYU5 128 aa2.58□□□□□ -2
CCNL1-218ENST00000476744 KRTAP19-3Q7Z4W3 81 aa2.56□□□□□ -2
CCNL1-218ENST00000476744 MT1GP13640 62 aa2.55□□□□□ -2
CCNL1-218ENST00000476744 KRTAP20-1Q3LI63 56 aa2.55□□□□□ -2
CCNL1-218ENST00000476744 MUC12Q9UKN1 5478 aa2.54□□□□□ -2
CCNL1-218ENST00000476744 MT1MQ8N339 61 aa2.53□□□□□ -2
CCNL1-218ENST00000476744 KRTAP5-7Q6L8G8 165 aa2.51□□□□□ -2.01
CCNL1-218ENST00000476744 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
CCNL1-218ENST00000476744 MDN1Q9NU22 5596 aa2.47□□□□□ -2.01
CCNL1-218ENST00000476744 SPRR2FQ96RM1 72 aa2.42□□□□□ -2.02
CCNL1-218ENST00000476744 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
CCNL1-218ENST00000476744 SPRR2EP22531 72 aa2.36□□□□□ -2.03
CCNL1-218ENST00000476744 SPRR2BP35325 72 aa2.36□□□□□ -2.03
CCNL1-218ENST00000476744 SPRR2AP35326 72 aa2.36□□□□□ -2.03
CCNL1-218ENST00000476744 GPR98Q8WXG9 6306 aa2.29□□□□□ -2.04
CCNL1-218ENST00000476744 MT1AP04731 61 aa2.29□□□□□ -2.04
CCNL1-218ENST00000476744 SPRR2DP22532 72 aa2.29□□□□□ -2.04
CCNL1-218ENST00000476744 KRTAP6-1Q3LI64 71 aa2.24□□□□□ -2.05
CCNL1-218ENST00000476744 KRTAP12-4P60329 112 aa2.17□□□□□ -2.06
CCNL1-218ENST00000476744 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
CCNL1-218ENST00000476744 DSTQ03001 7570 aaKnown RBP2.16□□□□□ -2.06
CCNL1-218ENST00000476744 SYNE1Q8NF91 8797 aaKnown RBP2.13□□□□□ -2.07
CCNL1-218ENST00000476744 HMCN1Q96RW7 5635 aa2.06□□□□□ -2.08
CCNL1-218ENST00000476744 AHNAK2Q8IVF2 5795 aa2.04□□□□□ -2.08
CCNL1-218ENST00000476744 MT4P47944 62 aa2.04□□□□□ -2.08
CCNL1-218ENST00000476744 KRTAP6-2Q3LI66 62 aa2□□□□□ -2.09
CCNL1-218ENST00000476744 KRTAP5-10Q6L8G5 202 aa1.97□□□□□ -2.09
CCNL1-218ENST00000476744 KRTAP20-2Q3LI61 65 aa1.91□□□□□ -2.1
CCNL1-218ENST00000476744 PRM1P04553 51 aa1.89□□□□□ -2.11
CCNL1-218ENST00000476744 AHNAKQ09666 5890 aaKnown RBP1.74□□□□□ -2.13
CCNL1-218ENST00000476744 MUC5ACP98088 5654 aa1.74□□□□□ -2.13
CCNL1-218ENST00000476744 MUC5BQ9HC84 5762 aaPredicted RBP1.68□□□□□ -2.14
CCNL1-218ENST00000476744 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
CCNL1-218ENST00000476744 PHGR1C9JFL3 82 aa1.22□□□□□ -2.21
CCNL1-218ENST00000476744 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 12.4 ms