RNA–Protein interactions for RNA: ENST00000476556.5

RERE-212, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 1 (best) BASIC

Gene RERE, Length 4,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-212ENST00000476556 KRTAP2-3P0C7H8 128 aa4.17□□□□□ -1.74
RERE-212ENST00000476556 KRTAP2-4Q9BYR9 128 aa4.17□□□□□ -1.74
RERE-212ENST00000476556 KRTAP2-1Q9BYU5 128 aa4.17□□□□□ -1.74
RERE-212ENST00000476556 SYNE1Q8NF91 8797 aaKnown RBP4.17□□□□□ -1.74
RERE-212ENST00000476556 MT1MQ8N339 61 aa4.13□□□□□ -1.75
RERE-212ENST00000476556 LCE2AQ5TA79 106 aaPredicted RBP4.12□□□□□ -1.75
RERE-212ENST00000476556 LCE3DQ9BYE3 92 aa4.12□□□□□ -1.75
RERE-212ENST00000476556 KMT2DO14686 5537 aa4.08□□□□□ -1.76
RERE-212ENST00000476556 LCE3EQ5T5B0 92 aa4.06□□□□□ -1.76
RERE-212ENST00000476556 KRTAP19-6Q3LI70 58 aa4.06□□□□□ -1.76
RERE-212ENST00000476556 USH2AO75445 5202 aa4.06□□□□□ -1.76
RERE-212ENST00000476556 SPRR2EP22531 72 aa4.04□□□□□ -1.76
RERE-212ENST00000476556 SPRR2BP35325 72 aa4.04□□□□□ -1.76
RERE-212ENST00000476556 SPRR2AP35326 72 aa4.04□□□□□ -1.76
RERE-212ENST00000476556 FCGBPQ9Y6R7 5405 aaPredicted RBP3.95□□□□□ -1.78
RERE-212ENST00000476556 KRTAP9-6A0A140TA67 174 aa3.94□□□□□ -1.78
RERE-212ENST00000476556 KRTAP4-9Q9BYQ8 210 aa3.93□□□□□ -1.78
RERE-212ENST00000476556 DSTQ03001 7570 aaKnown RBP3.9□□□□□ -1.79
RERE-212ENST00000476556 OBSCNQ5VST9 7968 aa3.89□□□□□ -1.79
RERE-212ENST00000476556 PRM1P04553 51 aa3.88□□□□□ -1.79
RERE-212ENST00000476556 SPRR2DP22532 72 aa3.88□□□□□ -1.79
RERE-212ENST00000476556 KRTAP9-2Q9BYQ4 174 aa3.87□□□□□ -1.79
RERE-212ENST00000476556 SYNE2Q8WXH0 6885 aaKnown RBP3.79□□□□□ -1.8
RERE-212ENST00000476556 MT1AP04731 61 aa3.78□□□□□ -1.8
RERE-212ENST00000476556 LCE2DQ5TA82 110 aaPredicted RBP3.78□□□□□ -1.8
RERE-212ENST00000476556 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
RERE-212ENST00000476556 LCE5AQ5TCM9 118 aa3.72□□□□□ -1.81
RERE-212ENST00000476556 MT3P25713 68 aa3.71□□□□□ -1.82
RERE-212ENST00000476556 MUC12Q9UKN1 5478 aa3.69□□□□□ -1.82
RERE-212ENST00000476556 SSPOA2VEC9 5147 aa3.61□□□□□ -1.83
RERE-212ENST00000476556 KRTAP9-7A8MTY7 169 aa3.6□□□□□ -1.83
RERE-212ENST00000476556 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
RERE-212ENST00000476556 LCE1AQ5T7P2 110 aa3.51□□□□□ -1.85
RERE-212ENST00000476556 MT4P47944 62 aa3.5□□□□□ -1.85
RERE-212ENST00000476556 KRTAP9-4Q9BYQ2 154 aa3.49□□□□□ -1.85
RERE-212ENST00000476556 KRTAP20-1Q3LI63 56 aa3.45□□□□□ -1.86
RERE-212ENST00000476556 MACF1Q9UPN3 7388 aaKnown RBP3.44□□□□□ -1.86
RERE-212ENST00000476556 LCE1DQ5T752 114 aa3.39□□□□□ -1.87
RERE-212ENST00000476556 LCE1BQ5T7P3 118 aa3.35□□□□□ -1.87
RERE-212ENST00000476556 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.34□□□□□ -1.87
RERE-212ENST00000476556 KRTAP6-3Q3LI67 103 aa3.3□□□□□ -1.88
RERE-212ENST00000476556 KRTAP2-2Q9BYT5 123 aa3.21□□□□□ -1.9
RERE-212ENST00000476556 KRTAP5-5Q701N2 237 aaPredicted RBP3.2□□□□□ -1.9
RERE-212ENST00000476556 KRTAP5-9P26371 169 aa3.17□□□□□ -1.9
RERE-212ENST00000476556 MDN1Q9NU22 5596 aa3.12□□□□□ -1.91
RERE-212ENST00000476556 LCE4AQ5TA78 99 aa3.05□□□□□ -1.92
RERE-212ENST00000476556 GPR98Q8WXG9 6306 aa3.05□□□□□ -1.92
RERE-212ENST00000476556 KRTAP4-6Q9BYQ5 205 aa2.98□□□□□ -1.93
RERE-212ENST00000476556 MUC19Q7Z5P9 8384 aa2.98□□□□□ -1.93
RERE-212ENST00000476556 NEBP20929 6669 aa2.92□□□□□ -1.94
RERE-212ENST00000476556 KRTAP4-11Q9BYQ6 195 aa2.91□□□□□ -1.94
RERE-212ENST00000476556 KRTAP20-2Q3LI61 65 aa2.88□□□□□ -1.95
RERE-212ENST00000476556 LCE1EQ5T753 118 aa2.81□□□□□ -1.96
RERE-212ENST00000476556 KRTAP5-4Q6L8H1 288 aa2.68□□□□□ -1.98
RERE-212ENST00000476556 MUC5ACP98088 5654 aa2.61□□□□□ -1.99
RERE-212ENST00000476556 LCE1CQ5T751 118 aa2.57□□□□□ -2
RERE-212ENST00000476556 LCE1FQ5T754 118 aa2.57□□□□□ -2
RERE-212ENST00000476556 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
RERE-212ENST00000476556 KRTAP9-9Q9BYP9 154 aa2.55□□□□□ -2
RERE-212ENST00000476556 HMCN1Q96RW7 5635 aa2.46□□□□□ -2.02
RERE-212ENST00000476556 KRTAP5-10Q6L8G5 202 aa2.44□□□□□ -2.02
RERE-212ENST00000476556 KRTAP5-2Q701N4 177 aa2.42□□□□□ -2.02
RERE-212ENST00000476556 KRTAP4-12Q9BQ66 201 aa2.41□□□□□ -2.02
RERE-212ENST00000476556 KRTAP4-2Q9BYR5 136 aa2.41□□□□□ -2.02
RERE-212ENST00000476556 AHNAK2Q8IVF2 5795 aa2.36□□□□□ -2.03
RERE-212ENST00000476556 KRTAP5-3Q6L8H2 238 aa2.34□□□□□ -2.03
RERE-212ENST00000476556 KRTAP5-1Q6L8H4 278 aa2.12□□□□□ -2.07
RERE-212ENST00000476556 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
RERE-212ENST00000476556 KRTAP5-8O75690 187 aa2.09□□□□□ -2.07
RERE-212ENST00000476556 AHNAKQ09666 5890 aaKnown RBP2.07□□□□□ -2.08
RERE-212ENST00000476556 KRTAP5-7Q6L8G8 165 aa2□□□□□ -2.09
RERE-212ENST00000476556 KRTAP5-11Q6L8G4 156 aa1.99□□□□□ -2.09
RERE-212ENST00000476556 MUC5BQ9HC84 5762 aaPredicted RBP1.98□□□□□ -2.09
RERE-212ENST00000476556 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
RERE-212ENST00000476556 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.96□□□□□ -2.1
RERE-212ENST00000476556 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
RERE-212ENST00000476556 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 229.4 ms