RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-208ENST00000475997 KMT2DO14686 5537 aa2.05□□□□□ -2.08
HNRNPU-208ENST00000475997 MT1GP13640 62 aa2.02□□□□□ -2.09
HNRNPU-208ENST00000475997 LCE2AQ5TA79 106 aaPredicted RBP2.01□□□□□ -2.09
HNRNPU-208ENST00000475997 KRTAP19-7Q3SYF9 63 aa2□□□□□ -2.09
HNRNPU-208ENST00000475997 MT1LQ93083 61 aa2□□□□□ -2.09
HNRNPU-208ENST00000475997 MT1EP04732 61 aa1.99□□□□□ -2.09
HNRNPU-208ENST00000475997 KRTAP9-6A8MVA2 160 aa1.98□□□□□ -2.09
HNRNPU-208ENST00000475997 SYNE1Q8NF91 8797 aaKnown RBP1.97□□□□□ -2.09
HNRNPU-208ENST00000475997 DSTQ03001 7570 aaKnown RBP1.96□□□□□ -2.1
HNRNPU-208ENST00000475997 SPRR2EP22531 72 aa1.96□□□□□ -2.1
HNRNPU-208ENST00000475997 SPRR2BP35325 72 aa1.96□□□□□ -2.1
HNRNPU-208ENST00000475997 SPRR2AP35326 72 aa1.96□□□□□ -2.1
HNRNPU-208ENST00000475997 OBSCNQ5VST9 7968 aa1.94□□□□□ -2.1
HNRNPU-208ENST00000475997 KRTAP4-3Q9BYR4 195 aa1.94□□□□□ -2.1
HNRNPU-208ENST00000475997 PRM1P04553 51 aa1.94□□□□□ -2.1
HNRNPU-208ENST00000475997 FCGBPQ9Y6R7 5405 aaPredicted RBP1.93□□□□□ -2.1
HNRNPU-208ENST00000475997 KRTAP2-3P0C7H8 128 aa1.91□□□□□ -2.1
HNRNPU-208ENST00000475997 KRTAP2-4Q9BYR9 128 aa1.91□□□□□ -2.1
HNRNPU-208ENST00000475997 KRTAP2-1Q9BYU5 128 aa1.91□□□□□ -2.1
HNRNPU-208ENST00000475997 KRTAP19-3Q7Z4W3 81 aa1.91□□□□□ -2.1
HNRNPU-208ENST00000475997 KRTAP19-6Q3LI70 58 aa1.9□□□□□ -2.1
HNRNPU-208ENST00000475997 SPRR2DP22532 72 aa1.9□□□□□ -2.11
HNRNPU-208ENST00000475997 MT1MQ8N339 61 aa1.89□□□□□ -2.11
HNRNPU-208ENST00000475997 MUC12Q9UKN1 5478 aa1.86□□□□□ -2.11
HNRNPU-208ENST00000475997 SSPOA2VEC9 5147 aa1.85□□□□□ -2.11
HNRNPU-208ENST00000475997 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.85□□□□□ -2.11
HNRNPU-208ENST00000475997 KRTAP5-3Q6L8H2 238 aa1.82□□□□□ -2.12
HNRNPU-208ENST00000475997 HMCN1Q96RW7 5635 aa1.82□□□□□ -2.12
HNRNPU-208ENST00000475997 SYNE2Q8WXH0 6885 aaKnown RBP1.79□□□□□ -2.12
HNRNPU-208ENST00000475997 KRTAP4-9Q9BYQ8 210 aa1.78□□□□□ -2.12
HNRNPU-208ENST00000475997 KRTAP4-2Q9BYR5 136 aa1.78□□□□□ -2.12
HNRNPU-208ENST00000475997 KRTAP9-2Q9BYQ4 174 aa1.76□□□□□ -2.13
HNRNPU-208ENST00000475997 LCE5AQ5TCM9 118 aa1.75□□□□□ -2.13
HNRNPU-208ENST00000475997 LCE1BQ5T7P3 118 aa1.75□□□□□ -2.13
HNRNPU-208ENST00000475997 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.74□□□□□ -2.13
HNRNPU-208ENST00000475997 KRTAP9-6A0A140TA67 174 aa1.73□□□□□ -2.13
HNRNPU-208ENST00000475997 MT1AP04731 61 aa1.73□□□□□ -2.13
HNRNPU-208ENST00000475997 LCE1DQ5T752 114 aa1.73□□□□□ -2.13
HNRNPU-208ENST00000475997 MACF1Q9UPN3 7388 aaKnown RBP1.72□□□□□ -2.13
HNRNPU-208ENST00000475997 KRTAP6-1Q3LI64 71 aa1.71□□□□□ -2.14
HNRNPU-208ENST00000475997 KRTAP9-9Q9BYP9 154 aa1.71□□□□□ -2.14
HNRNPU-208ENST00000475997 KRTAP9-4Q9BYQ2 154 aa1.71□□□□□ -2.14
HNRNPU-208ENST00000475997 KRTAP4-12Q9BQ66 201 aa1.71□□□□□ -2.14
HNRNPU-208ENST00000475997 KRTAP5-2Q701N4 177 aa1.69□□□□□ -2.14
HNRNPU-208ENST00000475997 MUC5BQ9HC84 5762 aaPredicted RBP1.66□□□□□ -2.14
HNRNPU-208ENST00000475997 LCE1AQ5T7P2 110 aa1.65□□□□□ -2.14
HNRNPU-208ENST00000475997 KRTAP6-2Q3LI66 62 aa1.64□□□□□ -2.15
HNRNPU-208ENST00000475997 MT4P47944 62 aa1.64□□□□□ -2.15
HNRNPU-208ENST00000475997 MDN1Q9NU22 5596 aa1.62□□□□□ -2.15
HNRNPU-208ENST00000475997 KRTAP9-7A8MTY7 169 aa1.62□□□□□ -2.15
HNRNPU-208ENST00000475997 KRTAP2-2Q9BYT5 123 aa1.57□□□□□ -2.16
HNRNPU-208ENST00000475997 KRTAP5-9P26371 169 aa1.54□□□□□ -2.16
HNRNPU-208ENST00000475997 KRTAP6-3Q3LI67 103 aa1.5□□□□□ -2.17
HNRNPU-208ENST00000475997 LCE1CQ5T751 118 aa1.5□□□□□ -2.17
HNRNPU-208ENST00000475997 LCE1EQ5T753 118 aa1.5□□□□□ -2.17
HNRNPU-208ENST00000475997 LCE1FQ5T754 118 aa1.5□□□□□ -2.17
HNRNPU-208ENST00000475997 KRTAP5-5Q701N2 237 aaPredicted RBP1.49□□□□□ -2.17
HNRNPU-208ENST00000475997 MUC19Q7Z5P9 8384 aa1.49□□□□□ -2.17
HNRNPU-208ENST00000475997 KRTAP4-11Q9BYQ6 195 aa1.48□□□□□ -2.17
HNRNPU-208ENST00000475997 LCE4AQ5TA78 99 aa1.46□□□□□ -2.18
HNRNPU-208ENST00000475997 KRTAP5-4Q6L8H1 288 aa1.38□□□□□ -2.19
HNRNPU-208ENST00000475997 KRTAP20-1Q3LI63 56 aa1.37□□□□□ -2.19
HNRNPU-208ENST00000475997 KRTAP20-2Q3LI61 65 aa1.34□□□□□ -2.19
HNRNPU-208ENST00000475997 NEBP20929 6669 aa1.33□□□□□ -2.2
HNRNPU-208ENST00000475997 GPR98Q8WXG9 6306 aa1.27□□□□□ -2.21
HNRNPU-208ENST00000475997 MUC5ACP98088 5654 aa1.25□□□□□ -2.21
HNRNPU-208ENST00000475997 KRTAP4-4Q9BYR3 166 aa1.23□□□□□ -2.21
HNRNPU-208ENST00000475997 KRTAP5-10Q6L8G5 202 aa1.14□□□□□ -2.23
HNRNPU-208ENST00000475997 KRTAP5-8O75690 187 aa1.12□□□□□ -2.23
HNRNPU-208ENST00000475997 KRTAP5-11Q6L8G4 156 aa1.1□□□□□ -2.23
HNRNPU-208ENST00000475997 AHNAKQ09666 5890 aaKnown RBP1.05□□□□□ -2.24
HNRNPU-208ENST00000475997 KRTAP5-1Q6L8H4 278 aa1.04□□□□□ -2.24
HNRNPU-208ENST00000475997 AHNAK2Q8IVF2 5795 aa1.04□□□□□ -2.24
HNRNPU-208ENST00000475997 KRTAP21-2Q3LI59 83 aa1.02□□□□□ -2.25
HNRNPU-208ENST00000475997 KRTAP21-1Q3LI58 79 aa0.9□□□□□ -2.26
HNRNPU-208ENST00000475997 KRTAP5-7Q6L8G8 165 aa0.87□□□□□ -2.27
HNRNPU-208ENST00000475997 PHGR1C9JFL3 82 aa0.81□□□□□ -2.28
HNRNPU-208ENST00000475997 MUC16Q8WXI7 14507 aa0.51□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 9.7 ms