RNA–Protein interactions for RNA: ENST00000475996.1

HLA-F-224, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-224ENST00000475996 KRTAP8-1Q8IUC2 63 aa4.94□□□□□ -1.62
HLA-F-224ENST00000475996 KRTAP25-1Q3LHN0 102 aa4.93□□□□□ -1.62
HLA-F-224ENST00000475996 LCE5AQ5TCM9 118 aa4.93□□□□□ -1.62
HLA-F-224ENST00000475996 KRTAP5-3Q6L8H2 238 aa4.93□□□□□ -1.62
HLA-F-224ENST00000475996 KRTAP6-3Q3LI67 103 aa4.89□□□□□ -1.63
HLA-F-224ENST00000475996 LCE3AQ5TA76 89 aa4.89□□□□□ -1.63
HLA-F-224ENST00000475996 PRO0628Q9UI54 55 aa4.87□□□□□ -1.63
HLA-F-224ENST00000475996 PMAIP1Q13794 54 aa4.85□□□□□ -1.63
HLA-F-224ENST00000475996 KRTAP5-9P26371 169 aa4.83□□□□□ -1.64
HLA-F-224ENST00000475996 SPRR2FQ96RM1 72 aa4.83□□□□□ -1.64
HLA-F-224ENST00000475996 MUC12Q9UKN1 5478 aa4.8□□□□□ -1.64
HLA-F-224ENST00000475996 KRTAP19-5Q3LI72 72 aa4.78□□□□□ -1.64
HLA-F-224ENST00000475996 KRTAP19-7Q3SYF9 63 aa4.77□□□□□ -1.65
HLA-F-224ENST00000475996 MDN1Q9NU22 5596 aa4.74□□□□□ -1.65
HLA-F-224ENST00000475996 NDUFAF8A1L188 74 aa4.72□□□□□ -1.65
HLA-F-224ENST00000475996 MT1EP04732 61 aa4.72□□□□□ -1.65
HLA-F-224ENST00000475996 KRTAP12-3P60328 96 aa4.68□□□□□ -1.66
HLA-F-224ENST00000475996 PP632Q6XCG6 107 aa4.67□□□□□ -1.66
HLA-F-224ENST00000475996 SPRR2EP22531 72 aa4.67□□□□□ -1.66
HLA-F-224ENST00000475996 SPRR2BP35325 72 aa4.67□□□□□ -1.66
HLA-F-224ENST00000475996 SPRR2AP35326 72 aa4.67□□□□□ -1.66
HLA-F-224ENST00000475996 LCE1AQ5T7P2 110 aa4.64□□□□□ -1.67
HLA-F-224ENST00000475996 NEBP20929 6669 aa4.59□□□□□ -1.68
HLA-F-224ENST00000475996 KRTAP19-3Q7Z4W3 81 aa4.58□□□□□ -1.68
HLA-F-224ENST00000475996 MT1LQ93083 61 aa4.58□□□□□ -1.68
HLA-F-224ENST00000475996 KTN1-AS1Q86SY8 53 aa4.55□□□□□ -1.68
HLA-F-224ENST00000475996 MT1GP13640 62 aa4.5□□□□□ -1.69
HLA-F-224ENST00000475996 SPRR2DP22532 72 aa4.5□□□□□ -1.69
HLA-F-224ENST00000475996 MT1MQ8N339 61 aa4.46□□□□□ -1.7
HLA-F-224ENST00000475996 KRTAP4-3Q9BYR4 195 aa4.38□□□□□ -1.71
HLA-F-224ENST00000475996 KRTAP20-1Q3LI63 56 aa4.36□□□□□ -1.71
HLA-F-224ENST00000475996 DSTQ03001 7570 aaKnown RBP4.36□□□□□ -1.71
HLA-F-224ENST00000475996 LCE3CQ5T5A8 94 aa4.34□□□□□ -1.71
HLA-F-224ENST00000475996 KRTAP2-3P0C7H8 128 aa4.33□□□□□ -1.72
HLA-F-224ENST00000475996 KRTAP2-4Q9BYR9 128 aa4.33□□□□□ -1.72
HLA-F-224ENST00000475996 MT3P25713 68 aa4.31□□□□□ -1.72
HLA-F-224ENST00000475996 KRTAP2-2Q9BYT5 123 aa4.22□□□□□ -1.73
HLA-F-224ENST00000475996 KRTAP2-1Q9BYU5 128 aa4.22□□□□□ -1.73
HLA-F-224ENST00000475996 KRTAP9-6A8MVA2 160 aa4.11□□□□□ -1.75
HLA-F-224ENST00000475996 LCE1FQ5T754 118 aa4.05□□□□□ -1.76
HLA-F-224ENST00000475996 SPRR5A0A1B0GTR4 108 aa4.03□□□□□ -1.76
HLA-F-224ENST00000475996 KRTAP5-5Q701N2 237 aaPredicted RBP4.02□□□□□ -1.77
HLA-F-224ENST00000475996 KRTAP5-4Q6L8H1 288 aa3.97□□□□□ -1.77
HLA-F-224ENST00000475996 LUZP6Q538Z0 58 aa3.96□□□□□ -1.78
HLA-F-224ENST00000475996 MT4P47944 62 aa3.92□□□□□ -1.78
HLA-F-224ENST00000475996 SYNE1Q8NF91 8797 aaKnown RBP3.89□□□□□ -1.79
HLA-F-224ENST00000475996 MT1AP04731 61 aa3.89□□□□□ -1.79
HLA-F-224ENST00000475996 KRTAP6-1Q3LI64 71 aa3.87□□□□□ -1.79
HLA-F-224ENST00000475996 HMCN1Q96RW7 5635 aa3.83□□□□□ -1.8
HLA-F-224ENST00000475996 KRTAP12-4P60329 112 aa3.81□□□□□ -1.8
HLA-F-224ENST00000475996 KRTAP20-2Q3LI61 65 aa3.75□□□□□ -1.81
HLA-F-224ENST00000475996 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.65□□□□□ -1.82
HLA-F-224ENST00000475996 KRTAP6-2Q3LI66 62 aa3.6□□□□□ -1.83
HLA-F-224ENST00000475996 AHNAK2Q8IVF2 5795 aa3.56□□□□□ -1.84
HLA-F-224ENST00000475996 KRTAP5-2Q701N4 177 aa3.56□□□□□ -1.84
HLA-F-224ENST00000475996 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
HLA-F-224ENST00000475996 LCE3EQ5T5B0 92 aa3.44□□□□□ -1.86
HLA-F-224ENST00000475996 KRTAP5-10Q6L8G5 202 aa3.37□□□□□ -1.87
HLA-F-224ENST00000475996 GPR98Q8WXG9 6306 aa3.37□□□□□ -1.87
HLA-F-224ENST00000475996 OBSCNQ5VST9 7968 aa3.33□□□□□ -1.88
HLA-F-224ENST00000475996 LCE1EQ5T753 118 aa3.25□□□□□ -1.89
HLA-F-224ENST00000475996 LCE3DQ9BYE3 92 aa3.22□□□□□ -1.89
HLA-F-224ENST00000475996 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
HLA-F-224ENST00000475996 KRTAP5-7Q6L8G8 165 aa3.18□□□□□ -1.9
HLA-F-224ENST00000475996 KRTAP5-1Q6L8H4 278 aa3.15□□□□□ -1.9
HLA-F-224ENST00000475996 INE1O15225 51 aa3.09□□□□□ -1.92
HLA-F-224ENST00000475996 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
HLA-F-224ENST00000475996 MUC5ACP98088 5654 aa3.07□□□□□ -1.92
HLA-F-224ENST00000475996 LCE1BQ5T7P3 118 aa2.97□□□□□ -1.93
HLA-F-224ENST00000475996 LCE1CQ5T751 118 aa2.9□□□□□ -1.95
HLA-F-224ENST00000475996 MUC5BQ9HC84 5762 aaPredicted RBP2.88□□□□□ -1.95
HLA-F-224ENST00000475996 AHNAKQ09666 5890 aaKnown RBP2.75□□□□□ -1.97
HLA-F-224ENST00000475996 PRM1P04553 51 aa2.59□□□□□ -1.99
HLA-F-224ENST00000475996 KRTAP21-2Q3LI59 83 aa2.52□□□□□ -2.01
HLA-F-224ENST00000475996 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
HLA-F-224ENST00000475996 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
HLA-F-224ENST00000475996 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
HLA-F-224ENST00000475996 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 120.9 ms