RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 KRTAP19-3Q7Z4W3 81 aa6.88□□□□□ -1.31
SSR1-204ENST00000474597 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.85□□□□□ -1.31
SSR1-204ENST00000474597 KRTAP5-9P26371 169 aa6.85□□□□□ -1.31
SSR1-204ENST00000474597 MUC12Q9UKN1 5478 aa6.83□□□□□ -1.32
SSR1-204ENST00000474597 KRTAP4-7Q9BYR0 210 aa6.83□□□□□ -1.32
SSR1-204ENST00000474597 SYNE2Q8WXH0 6885 aaKnown RBP6.82□□□□□ -1.32
SSR1-204ENST00000474597 NDUFAF8A1L188 74 aa6.82□□□□□ -1.32
SSR1-204ENST00000474597 MT1GP13640 62 aa6.82□□□□□ -1.32
SSR1-204ENST00000474597 MT1MQ8N339 61 aa6.74□□□□□ -1.33
SSR1-204ENST00000474597 LCE5AQ5TCM9 118 aa6.73□□□□□ -1.33
SSR1-204ENST00000474597 KRTAP6-3Q3LI67 103 aa6.71□□□□□ -1.34
SSR1-204ENST00000474597 SPRR2EP22531 72 aa6.64□□□□□ -1.35
SSR1-204ENST00000474597 SPRR2BP35325 72 aa6.64□□□□□ -1.35
SSR1-204ENST00000474597 SPRR2AP35326 72 aa6.64□□□□□ -1.35
SSR1-204ENST00000474597 LCE1AQ5T7P2 110 aa6.64□□□□□ -1.35
SSR1-204ENST00000474597 KRTAP4-3Q9BYR4 195 aa6.62□□□□□ -1.35
SSR1-204ENST00000474597 KRTAP9-6A8MVA2 160 aa6.58□□□□□ -1.36
SSR1-204ENST00000474597 MDN1Q9NU22 5596 aa6.53□□□□□ -1.36
SSR1-204ENST00000474597 KRTAP9-7A8MTY7 169 aa6.46□□□□□ -1.38
SSR1-204ENST00000474597 LOC100996750A0A140TA64 210 aa6.41□□□□□ -1.38
SSR1-204ENST00000474597 SPRR2DP22532 72 aa6.39□□□□□ -1.39
SSR1-204ENST00000474597 DSTQ03001 7570 aaKnown RBP6.31□□□□□ -1.4
SSR1-204ENST00000474597 NEBP20929 6669 aa6.13□□□□□ -1.43
SSR1-204ENST00000474597 LCE3BQ5TA77 95 aa6.12□□□□□ -1.43
SSR1-204ENST00000474597 KRTAP2-3P0C7H8 128 aa6.11□□□□□ -1.43
SSR1-204ENST00000474597 KRTAP2-4Q9BYR9 128 aa6.11□□□□□ -1.43
SSR1-204ENST00000474597 KRTAP2-1Q9BYU5 128 aa6.11□□□□□ -1.43
SSR1-204ENST00000474597 KRTAP5-5Q701N2 237 aaPredicted RBP6.04□□□□□ -1.44
SSR1-204ENST00000474597 MT1AP04731 61 aa5.97□□□□□ -1.45
SSR1-204ENST00000474597 KRTAP6-1Q3LI64 71 aa5.92□□□□□ -1.46
SSR1-204ENST00000474597 KRTAP20-1Q3LI63 56 aa5.75□□□□□ -1.49
SSR1-204ENST00000474597 KRTAP2-2Q9BYT5 123 aa5.75□□□□□ -1.49
SSR1-204ENST00000474597 KRTAP5-4Q6L8H1 288 aa5.72□□□□□ -1.49
SSR1-204ENST00000474597 KRTAP9-4Q9BYQ2 154 aa5.67□□□□□ -1.5
SSR1-204ENST00000474597 KRTAP12-4P60329 112 aa5.66□□□□□ -1.5
SSR1-204ENST00000474597 LCE4AQ5TA78 99 aa5.65□□□□□ -1.5
SSR1-204ENST00000474597 SYNE1Q8NF91 8797 aaKnown RBP5.63□□□□□ -1.51
SSR1-204ENST00000474597 INE1O15225 51 aa5.62□□□□□ -1.51
SSR1-204ENST00000474597 MT4P47944 62 aa5.55□□□□□ -1.52
SSR1-204ENST00000474597 KRTAP4-6Q9BYQ5 205 aa5.48□□□□□ -1.53
SSR1-204ENST00000474597 KRTAP4-9Q9BYQ8 210 aa5.46□□□□□ -1.53
SSR1-204ENST00000474597 KRTAP6-2Q3LI66 62 aa5.45□□□□□ -1.54
SSR1-204ENST00000474597 MT3P25713 68 aa5.44□□□□□ -1.54
SSR1-204ENST00000474597 LCE1DQ5T752 114 aa5.41□□□□□ -1.54
SSR1-204ENST00000474597 KRTAP20-2Q3LI61 65 aa5.38□□□□□ -1.55
SSR1-204ENST00000474597 LCE3DQ9BYE3 92 aa5.29□□□□□ -1.56
SSR1-204ENST00000474597 HMCN1Q96RW7 5635 aa5.25□□□□□ -1.57
SSR1-204ENST00000474597 KRTAP5-2Q701N4 177 aa5.2□□□□□ -1.58
SSR1-204ENST00000474597 LCE3EQ5T5B0 92 aa5.15□□□□□ -1.59
SSR1-204ENST00000474597 KRTAP5-3Q6L8H2 238 aa5.15□□□□□ -1.59
SSR1-204ENST00000474597 OBSCNQ5VST9 7968 aa4.9□□□□□ -1.63
SSR1-204ENST00000474597 LCE1EQ5T753 118 aa4.67□□□□□ -1.66
SSR1-204ENST00000474597 KRTAP4-11Q9BYQ6 195 aa4.65□□□□□ -1.67
SSR1-204ENST00000474597 AHNAK2Q8IVF2 5795 aa4.62□□□□□ -1.67
SSR1-204ENST00000474597 PRM1P04553 51 aa4.53□□□□□ -1.68
SSR1-204ENST00000474597 KRTAP5-1Q6L8H4 278 aa4.5□□□□□ -1.69
SSR1-204ENST00000474597 KRTAP5-8O75690 187 aa4.45□□□□□ -1.7
SSR1-204ENST00000474597 LCE1BQ5T7P3 118 aa4.44□□□□□ -1.7
SSR1-204ENST00000474597 KRTAP5-10Q6L8G5 202 aa4.41□□□□□ -1.7
SSR1-204ENST00000474597 LCE1CQ5T751 118 aa4.35□□□□□ -1.71
SSR1-204ENST00000474597 KRTAP4-2Q9BYR5 136 aa4.34□□□□□ -1.71
SSR1-204ENST00000474597 MUC5ACP98088 5654 aa4.32□□□□□ -1.72
SSR1-204ENST00000474597 KRTAP5-7Q6L8G8 165 aa4.31□□□□□ -1.72
SSR1-204ENST00000474597 GPR98Q8WXG9 6306 aa4.19□□□□□ -1.74
SSR1-204ENST00000474597 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.05□□□□□ -1.76
SSR1-204ENST00000474597 KRTAP9-9Q9BYP9 154 aa4.05□□□□□ -1.76
SSR1-204ENST00000474597 KRTAP21-2Q3LI59 83 aa3.85□□□□□ -1.79
SSR1-204ENST00000474597 KRTAP5-11Q6L8G4 156 aa3.83□□□□□ -1.8
SSR1-204ENST00000474597 MUC5BQ9HC84 5762 aaPredicted RBP3.75□□□□□ -1.81
SSR1-204ENST00000474597 KRTAP4-12Q9BQ66 201 aa3.63□□□□□ -1.83
SSR1-204ENST00000474597 KRTAP4-4Q9BYR3 166 aa3.47□□□□□ -1.85
SSR1-204ENST00000474597 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
SSR1-204ENST00000474597 AHNAKQ09666 5890 aaKnown RBP3.39□□□□□ -1.87
SSR1-204ENST00000474597 PHGR1C9JFL3 82 aa3.29□□□□□ -1.88
SSR1-204ENST00000474597 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
SSR1-204ENST00000474597 KRTAP21-1Q3LI58 79 aa2.75□□□□□ -1.97
SSR1-204ENST00000474597 MUC16Q8WXI7 14507 aa2.14□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms