RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 KRTAP4-1Q9BYQ7 146 aa2.72□□□□□ -1.97
ATPAF1-204ENST00000474020 CAMK2N1Q7Z7J9 78 aa2.71□□□□□ -1.98
ATPAF1-204ENST00000474020 M0R2T5 61 aa2.66□□□□□ -1.98
ATPAF1-204ENST00000474020 C10orf95Q9H7T3 257 aa2.66□□□□□ -1.98
ATPAF1-204ENST00000474020 LPAP08519 4548 aa2.66□□□□□ -1.98
ATPAF1-204ENST00000474020 KRTAP19-2Q3LHN2 52 aa2.65□□□□□ -1.99
ATPAF1-204ENST00000474020 PP632Q6XCG6 107 aa2.65□□□□□ -1.99
ATPAF1-204ENST00000474020 PLAC4Q8WY50 150 aa2.62□□□□□ -1.99
ATPAF1-204ENST00000474020 TNP1P09430 55 aa2.6□□□□□ -1.99
ATPAF1-204ENST00000474020 MUC17Q685J3 4493 aa2.59□□□□□ -1.99
ATPAF1-204ENST00000474020 KRTAP5-5Q701N2 237 aaPredicted RBP2.57□□□□□ -2
ATPAF1-204ENST00000474020 KRTAP10-10P60014 251 aa2.55□□□□□ -2
ATPAF1-204ENST00000474020 SPRR2GQ9BYE4 73 aa2.55□□□□□ -2
ATPAF1-204ENST00000474020 MT1HP80294 61 aa2.54□□□□□ -2
ATPAF1-204ENST00000474020 LUZP6Q538Z0 58 aa2.5□□□□□ -2.01
ATPAF1-204ENST00000474020 SSPOA2VEC9 5147 aa2.49□□□□□ -2.01
ATPAF1-204ENST00000474020 FLGP20930 4061 aaPredicted RBP2.48□□□□□ -2.01
ATPAF1-204ENST00000474020 MT2AP02795 61 aa2.48□□□□□ -2.01
ATPAF1-204ENST00000474020 MT1FP04733 61 aa2.46□□□□□ -2.02
ATPAF1-204ENST00000474020 KRTAP19-8Q3LI54 63 aa2.45□□□□□ -2.02
ATPAF1-204ENST00000474020 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
ATPAF1-204ENST00000474020 LCE1BQ5T7P3 118 aa2.44□□□□□ -2.02
ATPAF1-204ENST00000474020 PRO2289Q9P1D8 64 aa2.44□□□□□ -2.02
ATPAF1-204ENST00000474020 USH2AO75445 5202 aa2.4□□□□□ -2.03
ATPAF1-204ENST00000474020 FCGBPQ9Y6R7 5405 aaPredicted RBP2.4□□□□□ -2.03
ATPAF1-204ENST00000474020 KRTAP20-1Q3LI63 56 aa2.39□□□□□ -2.03
ATPAF1-204ENST00000474020 SYNE2Q8WXH0 6885 aaKnown RBP2.37□□□□□ -2.03
ATPAF1-204ENST00000474020 MT1BP07438 61 aa2.36□□□□□ -2.03
ATPAF1-204ENST00000474020 MACF1Q9UPN3 7388 aaKnown RBP2.33□□□□□ -2.04
ATPAF1-204ENST00000474020 MT1XP80297 61 aa2.33□□□□□ -2.04
ATPAF1-204ENST00000474020 KRTAP8-1Q8IUC2 63 aa2.33□□□□□ -2.04
ATPAF1-204ENST00000474020 NEBP20929 6669 aa2.32□□□□□ -2.04
ATPAF1-204ENST00000474020 SPRR5A0A1B0GTR4 108 aa2.31□□□□□ -2.04
ATPAF1-204ENST00000474020 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
ATPAF1-204ENST00000474020 KRTAP12-3P60328 96 aa2.3□□□□□ -2.04
ATPAF1-204ENST00000474020 KRTAP6-3Q3LI67 103 aa2.3□□□□□ -2.04
ATPAF1-204ENST00000474020 GPR98Q8WXG9 6306 aa2.24□□□□□ -2.05
ATPAF1-204ENST00000474020 MUC12Q9UKN1 5478 aa2.23□□□□□ -2.05
ATPAF1-204ENST00000474020 KMT2DO14686 5537 aa2.2□□□□□ -2.06
ATPAF1-204ENST00000474020 KRTAP19-5Q3LI72 72 aa2.18□□□□□ -2.06
ATPAF1-204ENST00000474020 KRTAP2-3P0C7H8 128 aa2.17□□□□□ -2.06
ATPAF1-204ENST00000474020 KRTAP2-4Q9BYR9 128 aa2.17□□□□□ -2.06
ATPAF1-204ENST00000474020 MDN1Q9NU22 5596 aa2.13□□□□□ -2.07
ATPAF1-204ENST00000474020 INE1O15225 51 aa2.1□□□□□ -2.07
ATPAF1-204ENST00000474020 KRTAP19-6Q3LI70 58 aa2.1□□□□□ -2.07
ATPAF1-204ENST00000474020 KRTAP2-1Q9BYU5 128 aa2.08□□□□□ -2.08
ATPAF1-204ENST00000474020 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
ATPAF1-204ENST00000474020 KRTAP19-7Q3SYF9 63 aa2.06□□□□□ -2.08
ATPAF1-204ENST00000474020 MT1EP04732 61 aa2.05□□□□□ -2.08
ATPAF1-204ENST00000474020 MT1LQ93083 61 aa2.03□□□□□ -2.08
ATPAF1-204ENST00000474020 KRTAP5-7Q6L8G8 165 aa2□□□□□ -2.09
ATPAF1-204ENST00000474020 MT1GP13640 62 aa1.97□□□□□ -2.09
ATPAF1-204ENST00000474020 AHNAK2Q8IVF2 5795 aa1.96□□□□□ -2.1
ATPAF1-204ENST00000474020 SPRR2EP22531 72 aa1.95□□□□□ -2.1
ATPAF1-204ENST00000474020 SPRR2BP35325 72 aa1.95□□□□□ -2.1
ATPAF1-204ENST00000474020 SPRR2AP35326 72 aa1.95□□□□□ -2.1
ATPAF1-204ENST00000474020 KRTAP19-3Q7Z4W3 81 aa1.95□□□□□ -2.1
ATPAF1-204ENST00000474020 MT1MQ8N339 61 aa1.92□□□□□ -2.1
ATPAF1-204ENST00000474020 SPRR2FQ96RM1 72 aa1.92□□□□□ -2.1
ATPAF1-204ENST00000474020 SPRR2DP22532 72 aa1.9□□□□□ -2.11
ATPAF1-204ENST00000474020 KRTAP5-10Q6L8G5 202 aa1.87□□□□□ -2.11
ATPAF1-204ENST00000474020 HMCN1Q96RW7 5635 aa1.85□□□□□ -2.11
ATPAF1-204ENST00000474020 DSTQ03001 7570 aaKnown RBP1.84□□□□□ -2.11
ATPAF1-204ENST00000474020 MT1AP04731 61 aa1.75□□□□□ -2.13
ATPAF1-204ENST00000474020 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
ATPAF1-204ENST00000474020 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
ATPAF1-204ENST00000474020 KRTAP12-4P60329 112 aa1.71□□□□□ -2.14
ATPAF1-204ENST00000474020 MT4P47944 62 aa1.7□□□□□ -2.14
ATPAF1-204ENST00000474020 KRTAP6-1Q3LI64 71 aa1.69□□□□□ -2.14
ATPAF1-204ENST00000474020 MUC5ACP98088 5654 aa1.65□□□□□ -2.14
ATPAF1-204ENST00000474020 MUC5BQ9HC84 5762 aaPredicted RBP1.65□□□□□ -2.15
ATPAF1-204ENST00000474020 KRTAP6-2Q3LI66 62 aa1.55□□□□□ -2.16
ATPAF1-204ENST00000474020 SYNE1Q8NF91 8797 aaKnown RBP1.5□□□□□ -2.17
ATPAF1-204ENST00000474020 PRM1P04553 51 aa1.49□□□□□ -2.17
ATPAF1-204ENST00000474020 KRTAP20-2Q3LI61 65 aa1.46□□□□□ -2.18
ATPAF1-204ENST00000474020 PHGR1C9JFL3 82 aa1.14□□□□□ -2.23
ATPAF1-204ENST00000474020 KRTAP21-1Q3LI58 79 aa0.92□□□□□ -2.26
ATPAF1-204ENST00000474020 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 65.6 ms