RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 KRTAP4-7Q9BYR0 210 aa6.35□□□□□ -1.39
VARS2-206ENST00000473916 SYNE2Q8WXH0 6885 aaKnown RBP6.28□□□□□ -1.4
VARS2-206ENST00000473916 SPRR2FQ96RM1 72 aa6.27□□□□□ -1.41
VARS2-206ENST00000473916 KRTAP19-3Q7Z4W3 81 aa6.18□□□□□ -1.42
VARS2-206ENST00000473916 KRTAP9-6A8MVA2 160 aa6.16□□□□□ -1.42
VARS2-206ENST00000473916 KRTAP4-3Q9BYR4 195 aa6.13□□□□□ -1.43
VARS2-206ENST00000473916 KRTAP9-6A0A140TA67 174 aa6.11□□□□□ -1.43
VARS2-206ENST00000473916 KRTAP19-4Q3LI73 84 aa6.1□□□□□ -1.43
VARS2-206ENST00000473916 MT1MQ8N339 61 aa6.1□□□□□ -1.43
VARS2-206ENST00000473916 MT1GP13640 62 aa6.09□□□□□ -1.43
VARS2-206ENST00000473916 KRTAP5-9P26371 169 aa6.08□□□□□ -1.44
VARS2-206ENST00000473916 MDN1Q9NU22 5596 aa6.07□□□□□ -1.44
VARS2-206ENST00000473916 LCE5AQ5TCM9 118 aa6.06□□□□□ -1.44
VARS2-206ENST00000473916 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.03□□□□□ -1.44
VARS2-206ENST00000473916 INE1O15225 51 aa5.98□□□□□ -1.45
VARS2-206ENST00000473916 LCE1AQ5T7P2 110 aa5.96□□□□□ -1.45
VARS2-206ENST00000473916 LOC100996750A0A140TA64 210 aa5.95□□□□□ -1.46
VARS2-206ENST00000473916 DSTQ03001 7570 aaKnown RBP5.94□□□□□ -1.46
VARS2-206ENST00000473916 SPRR2EP22531 72 aa5.89□□□□□ -1.47
VARS2-206ENST00000473916 SPRR2BP35325 72 aa5.89□□□□□ -1.47
VARS2-206ENST00000473916 SPRR2AP35326 72 aa5.89□□□□□ -1.47
VARS2-206ENST00000473916 KRTAP6-3Q3LI67 103 aa5.86□□□□□ -1.47
VARS2-206ENST00000473916 SPRR2DP22532 72 aa5.65□□□□□ -1.5
VARS2-206ENST00000473916 KRTAP2-3P0C7H8 128 aa5.64□□□□□ -1.51
VARS2-206ENST00000473916 KRTAP2-4Q9BYR9 128 aa5.64□□□□□ -1.51
VARS2-206ENST00000473916 KRTAP2-1Q9BYU5 128 aa5.64□□□□□ -1.51
VARS2-206ENST00000473916 KRTAP9-7A8MTY7 169 aa5.63□□□□□ -1.51
VARS2-206ENST00000473916 NEBP20929 6669 aa5.53□□□□□ -1.52
VARS2-206ENST00000473916 KRTAP5-5Q701N2 237 aaPredicted RBP5.48□□□□□ -1.53
VARS2-206ENST00000473916 KRTAP6-1Q3LI64 71 aa5.43□□□□□ -1.54
VARS2-206ENST00000473916 LCE3BQ5TA77 95 aa5.41□□□□□ -1.54
VARS2-206ENST00000473916 MT1AP04731 61 aa5.38□□□□□ -1.55
VARS2-206ENST00000473916 SYNE1Q8NF91 8797 aaKnown RBP5.28□□□□□ -1.56
VARS2-206ENST00000473916 KRTAP4-9Q9BYQ8 210 aa5.13□□□□□ -1.59
VARS2-206ENST00000473916 KRTAP5-4Q6L8H1 288 aa5.12□□□□□ -1.59
VARS2-206ENST00000473916 KRTAP9-4Q9BYQ2 154 aa5.11□□□□□ -1.59
VARS2-206ENST00000473916 KRTAP2-2Q9BYT5 123 aa4.99□□□□□ -1.61
VARS2-206ENST00000473916 MT4P47944 62 aa4.98□□□□□ -1.61
VARS2-206ENST00000473916 KRTAP12-4P60329 112 aa4.97□□□□□ -1.61
VARS2-206ENST00000473916 KRTAP20-1Q3LI63 56 aa4.97□□□□□ -1.61
VARS2-206ENST00000473916 KRTAP4-6Q9BYQ5 205 aa4.97□□□□□ -1.61
VARS2-206ENST00000473916 KRTAP6-2Q3LI66 62 aa4.96□□□□□ -1.62
VARS2-206ENST00000473916 LCE4AQ5TA78 99 aa4.92□□□□□ -1.62
VARS2-206ENST00000473916 MT3P25713 68 aa4.84□□□□□ -1.64
VARS2-206ENST00000473916 HMCN1Q96RW7 5635 aa4.83□□□□□ -1.64
VARS2-206ENST00000473916 LCE1DQ5T752 114 aa4.83□□□□□ -1.64
VARS2-206ENST00000473916 KRTAP20-2Q3LI61 65 aa4.82□□□□□ -1.64
VARS2-206ENST00000473916 LCE3DQ9BYE3 92 aa4.8□□□□□ -1.64
VARS2-206ENST00000473916 OBSCNQ5VST9 7968 aa4.74□□□□□ -1.65
VARS2-206ENST00000473916 KRTAP5-2Q701N4 177 aa4.68□□□□□ -1.66
VARS2-206ENST00000473916 LCE3EQ5T5B0 92 aa4.67□□□□□ -1.66
VARS2-206ENST00000473916 KRTAP5-3Q6L8H2 238 aa4.63□□□□□ -1.67
VARS2-206ENST00000473916 PRM1P04553 51 aa4.22□□□□□ -1.73
VARS2-206ENST00000473916 AHNAK2Q8IVF2 5795 aa4.17□□□□□ -1.74
VARS2-206ENST00000473916 KRTAP4-11Q9BYQ6 195 aa4.13□□□□□ -1.75
VARS2-206ENST00000473916 LCE1EQ5T753 118 aa4.11□□□□□ -1.75
VARS2-206ENST00000473916 KRTAP5-1Q6L8H4 278 aa4.05□□□□□ -1.76
VARS2-206ENST00000473916 MUC5ACP98088 5654 aa4.05□□□□□ -1.76
VARS2-206ENST00000473916 LCE1BQ5T7P3 118 aa4.02□□□□□ -1.77
VARS2-206ENST00000473916 KRTAP5-8O75690 187 aa3.98□□□□□ -1.77
VARS2-206ENST00000473916 KRTAP5-10Q6L8G5 202 aa3.95□□□□□ -1.78
VARS2-206ENST00000473916 KRTAP4-2Q9BYR5 136 aa3.94□□□□□ -1.78
VARS2-206ENST00000473916 LCE1CQ5T751 118 aa3.87□□□□□ -1.79
VARS2-206ENST00000473916 KRTAP5-7Q6L8G8 165 aa3.81□□□□□ -1.8
VARS2-206ENST00000473916 GPR98Q8WXG9 6306 aa3.71□□□□□ -1.82
VARS2-206ENST00000473916 KRTAP4-12Q9BQ66 201 aa3.63□□□□□ -1.83
VARS2-206ENST00000473916 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.62□□□□□ -1.83
VARS2-206ENST00000473916 KRTAP21-2Q3LI59 83 aa3.53□□□□□ -1.84
VARS2-206ENST00000473916 MUC5BQ9HC84 5762 aaPredicted RBP3.52□□□□□ -1.85
VARS2-206ENST00000473916 KRTAP9-9Q9BYP9 154 aa3.49□□□□□ -1.85
VARS2-206ENST00000473916 KRTAP5-11Q6L8G4 156 aa3.4□□□□□ -1.87
VARS2-206ENST00000473916 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
VARS2-206ENST00000473916 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
VARS2-206ENST00000473916 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
VARS2-206ENST00000473916 PHGR1C9JFL3 82 aa2.95□□□□□ -1.94
VARS2-206ENST00000473916 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
VARS2-206ENST00000473916 KRTAP21-1Q3LI58 79 aa2.59□□□□□ -1.99
VARS2-206ENST00000473916 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 63.5 ms