RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 NEBP20929 6669 aa5.54□□□□□ -1.52
LMNA-213ENST00000473598 MDN1Q9NU22 5596 aa5.53□□□□□ -1.52
LMNA-213ENST00000473598 KRTAP12-3P60328 96 aa5.5□□□□□ -1.53
LMNA-213ENST00000473598 KRTAP19-5Q3LI72 72 aa5.49□□□□□ -1.53
LMNA-213ENST00000473598 SPRR2FQ96RM1 72 aa5.49□□□□□ -1.53
LMNA-213ENST00000473598 KRTAP19-7Q3SYF9 63 aa5.45□□□□□ -1.54
LMNA-213ENST00000473598 MT1EP04732 61 aa5.36□□□□□ -1.55
LMNA-213ENST00000473598 SPRR2EP22531 72 aa5.33□□□□□ -1.56
LMNA-213ENST00000473598 SPRR2BP35325 72 aa5.33□□□□□ -1.56
LMNA-213ENST00000473598 SPRR2AP35326 72 aa5.33□□□□□ -1.56
LMNA-213ENST00000473598 LCE1AQ5T7P2 110 aa5.3□□□□□ -1.56
LMNA-213ENST00000473598 MT1LQ93083 61 aa5.24□□□□□ -1.57
LMNA-213ENST00000473598 KRTAP20-1Q3LI63 56 aa5.23□□□□□ -1.57
LMNA-213ENST00000473598 KRTAP19-3Q7Z4W3 81 aa5.17□□□□□ -1.58
LMNA-213ENST00000473598 LCE3CQ5T5A8 94 aa5.16□□□□□ -1.58
LMNA-213ENST00000473598 KRTAP19-4Q3LI73 84 aa5.15□□□□□ -1.58
LMNA-213ENST00000473598 SPRR2DP22532 72 aa5.13□□□□□ -1.59
LMNA-213ENST00000473598 MT1GP13640 62 aa5.12□□□□□ -1.59
LMNA-213ENST00000473598 LCE5AQ5TCM9 118 aa5.1□□□□□ -1.59
LMNA-213ENST00000473598 KRTAP2-3P0C7H8 128 aa5.06□□□□□ -1.6
LMNA-213ENST00000473598 KRTAP2-4Q9BYR9 128 aa5.06□□□□□ -1.6
LMNA-213ENST00000473598 KRTAP2-1Q9BYU5 128 aa5.06□□□□□ -1.6
LMNA-213ENST00000473598 MT1MQ8N339 61 aa5.06□□□□□ -1.6
LMNA-213ENST00000473598 KRTAP4-7Q9BYR0 210 aa5.06□□□□□ -1.6
LMNA-213ENST00000473598 DSTQ03001 7570 aaKnown RBP5.01□□□□□ -1.61
LMNA-213ENST00000473598 LCE3BQ5TA77 95 aa4.97□□□□□ -1.61
LMNA-213ENST00000473598 KRTAP4-3Q9BYR4 195 aa4.95□□□□□ -1.62
LMNA-213ENST00000473598 KRTAP9-6A8MVA2 160 aa4.94□□□□□ -1.62
LMNA-213ENST00000473598 KRTAP2-2Q9BYT5 123 aa4.91□□□□□ -1.62
LMNA-213ENST00000473598 LOC100996750A0A140TA64 210 aa4.75□□□□□ -1.65
LMNA-213ENST00000473598 KRTAP4-9Q9BYQ8 210 aa4.6□□□□□ -1.67
LMNA-213ENST00000473598 GPR98Q8WXG9 6306 aa4.58□□□□□ -1.68
LMNA-213ENST00000473598 KRTAP5-5Q701N2 237 aaPredicted RBP4.57□□□□□ -1.68
LMNA-213ENST00000473598 KRTAP12-4P60329 112 aa4.56□□□□□ -1.68
LMNA-213ENST00000473598 KRTAP5-4Q6L8H1 288 aa4.52□□□□□ -1.69
LMNA-213ENST00000473598 MT4P47944 62 aa4.51□□□□□ -1.69
LMNA-213ENST00000473598 LCE4AQ5TA78 99 aa4.51□□□□□ -1.69
LMNA-213ENST00000473598 LCE1DQ5T752 114 aa4.5□□□□□ -1.69
LMNA-213ENST00000473598 HMCN1Q96RW7 5635 aa4.46□□□□□ -1.7
LMNA-213ENST00000473598 MT1AP04731 61 aa4.45□□□□□ -1.7
LMNA-213ENST00000473598 KRTAP4-6Q9BYQ5 205 aa4.43□□□□□ -1.7
LMNA-213ENST00000473598 KRTAP6-1Q3LI64 71 aa4.41□□□□□ -1.7
LMNA-213ENST00000473598 SYNE1Q8NF91 8797 aaKnown RBP4.37□□□□□ -1.71
LMNA-213ENST00000473598 KRTAP20-2Q3LI61 65 aa4.26□□□□□ -1.73
LMNA-213ENST00000473598 AHNAK2Q8IVF2 5795 aa4.24□□□□□ -1.73
LMNA-213ENST00000473598 KRTAP9-4Q9BYQ2 154 aa4.24□□□□□ -1.73
LMNA-213ENST00000473598 KRTAP5-10Q6L8G5 202 aa4.14□□□□□ -1.75
LMNA-213ENST00000473598 PRM1P04553 51 aa4.12□□□□□ -1.75
LMNA-213ENST00000473598 KRTAP5-3Q6L8H2 238 aa4.12□□□□□ -1.75
LMNA-213ENST00000473598 KRTAP6-2Q3LI66 62 aa4.08□□□□□ -1.76
LMNA-213ENST00000473598 MT3P25713 68 aa4.04□□□□□ -1.76
LMNA-213ENST00000473598 LCE3EQ5T5B0 92 aa4.02□□□□□ -1.77
LMNA-213ENST00000473598 KRTAP5-2Q701N4 177 aa4.01□□□□□ -1.77
LMNA-213ENST00000473598 LCE3DQ9BYE3 92 aa3.99□□□□□ -1.77
LMNA-213ENST00000473598 KRTAP5-7Q6L8G8 165 aa3.96□□□□□ -1.78
LMNA-213ENST00000473598 OBSCNQ5VST9 7968 aa3.91□□□□□ -1.78
LMNA-213ENST00000473598 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
LMNA-213ENST00000473598 LCE1EQ5T753 118 aa3.73□□□□□ -1.81
LMNA-213ENST00000473598 KRTAP5-8O75690 187 aa3.69□□□□□ -1.82
LMNA-213ENST00000473598 KRTAP5-1Q6L8H4 278 aa3.56□□□□□ -1.84
LMNA-213ENST00000473598 MUC5BQ9HC84 5762 aaPredicted RBP3.53□□□□□ -1.84
LMNA-213ENST00000473598 MUC5ACP98088 5654 aa3.5□□□□□ -1.85
LMNA-213ENST00000473598 AHNAKQ09666 5890 aaKnown RBP3.49□□□□□ -1.85
LMNA-213ENST00000473598 KRTAP9-9Q9BYP9 154 aa3.41□□□□□ -1.86
LMNA-213ENST00000473598 LCE1BQ5T7P3 118 aa3.31□□□□□ -1.88
LMNA-213ENST00000473598 KRTAP4-2Q9BYR5 136 aa3.31□□□□□ -1.88
LMNA-213ENST00000473598 LCE1CQ5T751 118 aa3.29□□□□□ -1.88
LMNA-213ENST00000473598 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
LMNA-213ENST00000473598 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.07□□□□□ -1.92
LMNA-213ENST00000473598 KRTAP4-12Q9BQ66 201 aa2.92□□□□□ -1.94
LMNA-213ENST00000473598 KRTAP5-11Q6L8G4 156 aa2.92□□□□□ -1.94
LMNA-213ENST00000473598 KRTAP21-2Q3LI59 83 aa2.9□□□□□ -1.95
LMNA-213ENST00000473598 KRTAP21-1Q3LI58 79 aa2.75□□□□□ -1.97
LMNA-213ENST00000473598 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
LMNA-213ENST00000473598 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
LMNA-213ENST00000473598 MUC19Q7Z5P9 8384 aa2.38□□□□□ -2.03
LMNA-213ENST00000473598 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 61.1 ms