RNA–Protein interactions for RNA: ENST00000473230.1

RCL1-209, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 3

Gene RCL1, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-209ENST00000473230 KRTAP12-1P59990 96 aa3.3□□□□□ -1.88
RCL1-209ENST00000473230 KRTAP12-2P59991 146 aa3.3□□□□□ -1.88
RCL1-209ENST00000473230 R4GN34 69 aa3.28□□□□□ -1.88
RCL1-209ENST00000473230 KRTAP5-2Q701N4 177 aa3.27□□□□□ -1.89
RCL1-209ENST00000473230 CRIPTQ9P021 101 aa3.27□□□□□ -1.89
RCL1-209ENST00000473230 MT1FP04733 61 aa3.26□□□□□ -1.89
RCL1-209ENST00000473230 USH2AO75445 5202 aa3.22□□□□□ -1.89
RCL1-209ENST00000473230 SSPOA2VEC9 5147 aa3.18□□□□□ -1.9
RCL1-209ENST00000473230 C10orf95Q9H7T3 257 aa3.18□□□□□ -1.9
RCL1-209ENST00000473230 LCE3CQ5T5A8 94 aa3.15□□□□□ -1.91
RCL1-209ENST00000473230 KRTAP19-6Q3LI70 58 aa3.14□□□□□ -1.91
RCL1-209ENST00000473230 CAMK2N1Q7Z7J9 78 aa3.13□□□□□ -1.91
RCL1-209ENST00000473230 LCE3AQ5TA76 89 aa3.11□□□□□ -1.91
RCL1-209ENST00000473230 FCGBPQ9Y6R7 5405 aaPredicted RBP3.1□□□□□ -1.91
RCL1-209ENST00000473230 MACF1Q9UPN3 7388 aaKnown RBP3.08□□□□□ -1.92
RCL1-209ENST00000473230 SPRR2GQ9BYE4 73 aa3.04□□□□□ -1.92
RCL1-209ENST00000473230 SYNE2Q8WXH0 6885 aaKnown RBP3.03□□□□□ -1.92
RCL1-209ENST00000473230 PLAC4Q8WY50 150 aa3.02□□□□□ -1.93
RCL1-209ENST00000473230 PP632Q6XCG6 107 aa3.01□□□□□ -1.93
RCL1-209ENST00000473230 KRTAP19-8Q3LI54 63 aa3□□□□□ -1.93
RCL1-209ENST00000473230 KRTAP6-3Q3LI67 103 aa3□□□□□ -1.93
RCL1-209ENST00000473230 TNP1P09430 55 aa2.99□□□□□ -1.93
RCL1-209ENST00000473230 MT1BP07438 61 aa2.98□□□□□ -1.93
RCL1-209ENST00000473230 PRO2289Q9P1D8 64 aa2.93□□□□□ -1.94
RCL1-209ENST00000473230 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
RCL1-209ENST00000473230 NEBP20929 6669 aa2.85□□□□□ -1.95
RCL1-209ENST00000473230 MUC12Q9UKN1 5478 aa2.84□□□□□ -1.96
RCL1-209ENST00000473230 MT1XP80297 61 aa2.81□□□□□ -1.96
RCL1-209ENST00000473230 KRTAP5-5Q701N2 237 aaPredicted RBP2.8□□□□□ -1.96
RCL1-209ENST00000473230 KRTAP20-1Q3LI63 56 aa2.79□□□□□ -1.96
RCL1-209ENST00000473230 LUZP6Q538Z0 58 aa2.79□□□□□ -1.96
RCL1-209ENST00000473230 KRTAP8-1Q8IUC2 63 aa2.78□□□□□ -1.96
RCL1-209ENST00000473230 SPRR2FQ96RM1 72 aa2.78□□□□□ -1.96
RCL1-209ENST00000473230 KMT2DO14686 5537 aa2.77□□□□□ -1.97
RCL1-209ENST00000473230 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
RCL1-209ENST00000473230 SPRR2EP22531 72 aa2.74□□□□□ -1.97
RCL1-209ENST00000473230 SPRR2BP35325 72 aa2.74□□□□□ -1.97
RCL1-209ENST00000473230 SPRR2AP35326 72 aa2.74□□□□□ -1.97
RCL1-209ENST00000473230 SPRR5A0A1B0GTR4 108 aa2.73□□□□□ -1.97
RCL1-209ENST00000473230 MDN1Q9NU22 5596 aa2.72□□□□□ -1.97
RCL1-209ENST00000473230 KRTAP2-3P0C7H8 128 aa2.72□□□□□ -1.97
RCL1-209ENST00000473230 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
RCL1-209ENST00000473230 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
RCL1-209ENST00000473230 KRTAP2-4Q9BYR9 128 aa2.72□□□□□ -1.97
RCL1-209ENST00000473230 KRTAP12-3P60328 96 aa2.7□□□□□ -1.98
RCL1-209ENST00000473230 SPRR2DP22532 72 aa2.66□□□□□ -1.98
RCL1-209ENST00000473230 KRTAP2-1Q9BYU5 128 aa2.63□□□□□ -1.99
RCL1-209ENST00000473230 KRTAP19-5Q3LI72 72 aa2.61□□□□□ -1.99
RCL1-209ENST00000473230 MT1EP04732 61 aa2.5□□□□□ -2.01
RCL1-209ENST00000473230 KRTAP19-7Q3SYF9 63 aa2.5□□□□□ -2.01
RCL1-209ENST00000473230 KRTAP19-3Q7Z4W3 81 aa2.5□□□□□ -2.01
RCL1-209ENST00000473230 MT1GP13640 62 aa2.46□□□□□ -2.02
RCL1-209ENST00000473230 MT1LQ93083 61 aa2.44□□□□□ -2.02
RCL1-209ENST00000473230 DSTQ03001 7570 aaKnown RBP2.42□□□□□ -2.02
RCL1-209ENST00000473230 MT1MQ8N339 61 aa2.37□□□□□ -2.03
RCL1-209ENST00000473230 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
RCL1-209ENST00000473230 INE1O15225 51 aa2.36□□□□□ -2.03
RCL1-209ENST00000473230 LCE3DQ9BYE3 92 aa2.34□□□□□ -2.03
RCL1-209ENST00000473230 GPR98Q8WXG9 6306 aa2.33□□□□□ -2.04
RCL1-209ENST00000473230 MT4P47944 62 aa2.3□□□□□ -2.04
RCL1-209ENST00000473230 HMCN1Q96RW7 5635 aa2.25□□□□□ -2.05
RCL1-209ENST00000473230 KRTAP12-4P60329 112 aa2.19□□□□□ -2.06
RCL1-209ENST00000473230 KRTAP5-7Q6L8G8 165 aa2.19□□□□□ -2.06
RCL1-209ENST00000473230 KRTAP20-2Q3LI61 65 aa2.15□□□□□ -2.07
RCL1-209ENST00000473230 KRTAP5-10Q6L8G5 202 aa2.15□□□□□ -2.07
RCL1-209ENST00000473230 AHNAK2Q8IVF2 5795 aa2.14□□□□□ -2.07
RCL1-209ENST00000473230 SYNE1Q8NF91 8797 aaKnown RBP2.1□□□□□ -2.07
RCL1-209ENST00000473230 MT1AP04731 61 aa2.08□□□□□ -2.08
RCL1-209ENST00000473230 KRTAP6-1Q3LI64 71 aa2.06□□□□□ -2.08
RCL1-209ENST00000473230 KRTAP21-2Q3LI59 83 aa1.97□□□□□ -2.09
RCL1-209ENST00000473230 KRTAP6-2Q3LI66 62 aa1.93□□□□□ -2.1
RCL1-209ENST00000473230 MUC5ACP98088 5654 aa1.8□□□□□ -2.12
RCL1-209ENST00000473230 AHNAKQ09666 5890 aaKnown RBP1.78□□□□□ -2.12
RCL1-209ENST00000473230 PRM1P04553 51 aa1.76□□□□□ -2.13
RCL1-209ENST00000473230 MUC5BQ9HC84 5762 aaPredicted RBP1.76□□□□□ -2.13
RCL1-209ENST00000473230 PHGR1C9JFL3 82 aa1.28□□□□□ -2.2
RCL1-209ENST00000473230 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
RCL1-209ENST00000473230 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 163.5 ms