RNA–Protein interactions for RNA: ENST00000472677.1

TRABD-206, Transcript of TraB domain containing, humanhuman

TSL 1 (best)

Gene TRABD, Length 1,661 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD-206ENST00000472677 KRTAP19-5Q3LI72 72 aa7.95□□□□□ -1.14
TRABD-206ENST00000472677 PP632Q6XCG6 107 aa7.94□□□□□ -1.14
TRABD-206ENST00000472677 LCE1AQ5T7P2 110 aa7.89□□□□□ -1.15
TRABD-206ENST00000472677 MT1EP04732 61 aa7.88□□□□□ -1.15
TRABD-206ENST00000472677 KRTAP12-3P60328 96 aa7.76□□□□□ -1.17
TRABD-206ENST00000472677 KRTAP19-3Q7Z4W3 81 aa7.7□□□□□ -1.18
TRABD-206ENST00000472677 SPRR2DP22532 72 aa7.67□□□□□ -1.18
TRABD-206ENST00000472677 LCE5AQ5TCM9 118 aa7.63□□□□□ -1.19
TRABD-206ENST00000472677 MT1LQ93083 61 aa7.63□□□□□ -1.19
TRABD-206ENST00000472677 MT1GP13640 62 aa7.59□□□□□ -1.19
TRABD-206ENST00000472677 KRTAP20-1Q3LI63 56 aa7.54□□□□□ -1.2
TRABD-206ENST00000472677 KRTAP15-1Q3LI76 137 aa7.52□□□□□ -1.21
TRABD-206ENST00000472677 KRTAP2-3P0C7H8 128 aa7.5□□□□□ -1.21
TRABD-206ENST00000472677 KRTAP2-4Q9BYR9 128 aa7.5□□□□□ -1.21
TRABD-206ENST00000472677 MT1MQ8N339 61 aa7.46□□□□□ -1.22
TRABD-206ENST00000472677 LCE3BQ5TA77 95 aa7.41□□□□□ -1.22
TRABD-206ENST00000472677 DSTQ03001 7570 aaKnown RBP7.37□□□□□ -1.23
TRABD-206ENST00000472677 KRTAP4-7Q9BYR0 210 aa7.32□□□□□ -1.24
TRABD-206ENST00000472677 KRTAP19-4Q3LI73 84 aa7.31□□□□□ -1.24
TRABD-206ENST00000472677 KRTAP2-2Q9BYT5 123 aa7.3□□□□□ -1.24
TRABD-206ENST00000472677 KRTAP2-1Q9BYU5 128 aa7.3□□□□□ -1.24
TRABD-206ENST00000472677 KRTAP4-3Q9BYR4 195 aa7.29□□□□□ -1.24
TRABD-206ENST00000472677 LCE3CQ5T5A8 94 aa7.22□□□□□ -1.25
TRABD-206ENST00000472677 LOC100996750A0A140TA64 210 aa6.9□□□□□ -1.3
TRABD-206ENST00000472677 SPRR5A0A1B0GTR4 108 aa6.9□□□□□ -1.3
TRABD-206ENST00000472677 KRTAP9-6A8MVA2 160 aa6.81□□□□□ -1.32
TRABD-206ENST00000472677 LCE4AQ5TA78 99 aa6.78□□□□□ -1.32
TRABD-206ENST00000472677 KRTAP5-5Q701N2 237 aaPredicted RBP6.76□□□□□ -1.33
TRABD-206ENST00000472677 KRTAP4-9Q9BYQ8 210 aa6.76□□□□□ -1.33
TRABD-206ENST00000472677 KRTAP5-4Q6L8H1 288 aa6.74□□□□□ -1.33
TRABD-206ENST00000472677 MT4P47944 62 aa6.68□□□□□ -1.34
TRABD-206ENST00000472677 LCE1DQ5T752 114 aa6.65□□□□□ -1.35
TRABD-206ENST00000472677 LUZP6Q538Z0 58 aa6.58□□□□□ -1.36
TRABD-206ENST00000472677 KRTAP4-6Q9BYQ5 205 aa6.53□□□□□ -1.36
TRABD-206ENST00000472677 HMCN1Q96RW7 5635 aa6.5□□□□□ -1.37
TRABD-206ENST00000472677 KRTAP12-4P60329 112 aa6.5□□□□□ -1.37
TRABD-206ENST00000472677 MT1AP04731 61 aa6.49□□□□□ -1.37
TRABD-206ENST00000472677 SYNE1Q8NF91 8797 aaKnown RBP6.45□□□□□ -1.38
TRABD-206ENST00000472677 KRTAP6-1Q3LI64 71 aa6.43□□□□□ -1.38
TRABD-206ENST00000472677 KRTAP20-2Q3LI61 65 aa6.35□□□□□ -1.39
TRABD-206ENST00000472677 KRTAP9-4Q9BYQ2 154 aa6.23□□□□□ -1.41
TRABD-206ENST00000472677 NDUFAF8A1L188 74 aa6.22□□□□□ -1.41
TRABD-206ENST00000472677 KRTAP5-3Q6L8H2 238 aa6.13□□□□□ -1.43
TRABD-206ENST00000472677 KRTAP6-2Q3LI66 62 aa6.05□□□□□ -1.44
TRABD-206ENST00000472677 AHNAK2Q8IVF2 5795 aa6.01□□□□□ -1.45
TRABD-206ENST00000472677 KRTAP5-2Q701N4 177 aa6□□□□□ -1.45
TRABD-206ENST00000472677 GPR98Q8WXG9 6306 aa5.98□□□□□ -1.45
TRABD-206ENST00000472677 MT3P25713 68 aa5.94□□□□□ -1.46
TRABD-206ENST00000472677 KRTAP5-10Q6L8G5 202 aa5.85□□□□□ -1.47
TRABD-206ENST00000472677 H3BS24 57 aa5.7□□□□□ -1.5
TRABD-206ENST00000472677 OBSCNQ5VST9 7968 aa5.69□□□□□ -1.5
TRABD-206ENST00000472677 KRTAP4-11Q9BYQ6 195 aa5.67□□□□□ -1.5
TRABD-206ENST00000472677 KRTAP5-7Q6L8G8 165 aa5.53□□□□□ -1.52
TRABD-206ENST00000472677 KRTAP5-8O75690 187 aa5.45□□□□□ -1.54
TRABD-206ENST00000472677 LCE3DQ9BYE3 92 aa5.38□□□□□ -1.55
TRABD-206ENST00000472677 A0A0A0MQY5 61 aa5.37□□□□□ -1.55
TRABD-206ENST00000472677 KRTAP5-1Q6L8H4 278 aa5.29□□□□□ -1.56
TRABD-206ENST00000472677 LCE1EQ5T753 118 aa5.28□□□□□ -1.56
TRABD-206ENST00000472677 LCE3EQ5T5B0 92 aa5.2□□□□□ -1.58
TRABD-206ENST00000472677 MUC5ACP98088 5654 aa5.1□□□□□ -1.59
TRABD-206ENST00000472677 INE1O15225 51 aa5.09□□□□□ -1.59
TRABD-206ENST00000472677 KRTAP9-9Q9BYP9 154 aa5.09□□□□□ -1.59
TRABD-206ENST00000472677 LCE1BQ5T7P3 118 aa4.99□□□□□ -1.61
TRABD-206ENST00000472677 KRTAP4-2Q9BYR5 136 aa4.92□□□□□ -1.62
TRABD-206ENST00000472677 LCE1CQ5T751 118 aa4.91□□□□□ -1.62
TRABD-206ENST00000472677 MUC5BQ9HC84 5762 aaPredicted RBP4.87□□□□□ -1.63
TRABD-206ENST00000472677 AHNAKQ09666 5890 aaKnown RBP4.76□□□□□ -1.65
TRABD-206ENST00000472677 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.51□□□□□ -1.69
TRABD-206ENST00000472677 PRM1P04553 51 aa4.41□□□□□ -1.7
TRABD-206ENST00000472677 KRTAP5-11Q6L8G4 156 aa4.38□□□□□ -1.71
TRABD-206ENST00000472677 KRTAP4-12Q9BQ66 201 aa4.31□□□□□ -1.72
TRABD-206ENST00000472677 KRTAP21-2Q3LI59 83 aa4.22□□□□□ -1.73
TRABD-206ENST00000472677 LCE1FQ5T754 118 aa4.13□□□□□ -1.75
TRABD-206ENST00000472677 KRTAP4-4Q9BYR3 166 aa3.82□□□□□ -1.8
TRABD-206ENST00000472677 PHGR1C9JFL3 82 aa3.78□□□□□ -1.81
TRABD-206ENST00000472677 MUC19Q7Z5P9 8384 aa3.45□□□□□ -1.86
TRABD-206ENST00000472677 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
TRABD-206ENST00000472677 MUC16Q8WXI7 14507 aa2.38□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 7.9 ms