RNA–Protein interactions for RNA: ENST00000471599.5

KPNA6-204, Transcript of karyopherin subunit alpha 6, humanhuman

TSL 2

Gene KPNA6, Length 3,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA6-204ENST00000471599 MACF1Q9UPN3 7388 aaKnown RBP2.89□□□□□ -1.95
KPNA6-204ENST00000471599 DSTQ03001 7570 aaKnown RBP2.88□□□□□ -1.95
KPNA6-204ENST00000471599 KRTAP10-5P60370 271 aa2.88□□□□□ -1.95
KPNA6-204ENST00000471599 FCGBPQ9Y6R7 5405 aaPredicted RBP2.88□□□□□ -1.95
KPNA6-204ENST00000471599 KRTAP20-1Q3LI63 56 aa2.87□□□□□ -1.95
KPNA6-204ENST00000471599 SYNE1Q8NF91 8797 aaKnown RBP2.86□□□□□ -1.95
KPNA6-204ENST00000471599 KRTAP4-8A0A0G2JLE6 195 aa2.85□□□□□ -1.95
KPNA6-204ENST00000471599 KRTAP4-8Q9BYQ9 185 aa2.85□□□□□ -1.95
KPNA6-204ENST00000471599 KRTAP2-2Q9BYT5 123 aa2.84□□□□□ -1.95
KPNA6-204ENST00000471599 SPRR2EP22531 72 aa2.8□□□□□ -1.96
KPNA6-204ENST00000471599 SPRR2BP35325 72 aa2.8□□□□□ -1.96
KPNA6-204ENST00000471599 SPRR2AP35326 72 aa2.8□□□□□ -1.96
KPNA6-204ENST00000471599 KRTAP10-7P60409 375 aaPredicted RBP2.8□□□□□ -1.96
KPNA6-204ENST00000471599 MT1XP80297 61 aa2.78□□□□□ -1.96
KPNA6-204ENST00000471599 KRTAP19-6Q3LI70 58 aa2.78□□□□□ -1.96
KPNA6-204ENST00000471599 KRTAP2-3P0C7H8 128 aa2.77□□□□□ -1.97
KPNA6-204ENST00000471599 LCE3CQ5T5A8 94 aa2.77□□□□□ -1.97
KPNA6-204ENST00000471599 KRTAP2-4Q9BYR9 128 aa2.77□□□□□ -1.97
KPNA6-204ENST00000471599 KRTAP2-1Q9BYU5 128 aa2.77□□□□□ -1.97
KPNA6-204ENST00000471599 KRTAP6-3Q3LI67 103 aa2.76□□□□□ -1.97
KPNA6-204ENST00000471599 MUC12Q9UKN1 5478 aa2.74□□□□□ -1.97
KPNA6-204ENST00000471599 LCE1DQ5T752 114 aa2.73□□□□□ -1.97
KPNA6-204ENST00000471599 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
KPNA6-204ENST00000471599 LCE1FQ5T754 118 aa2.71□□□□□ -1.98
KPNA6-204ENST00000471599 GPR98Q8WXG9 6306 aa2.7□□□□□ -1.98
KPNA6-204ENST00000471599 SPRR2DP22532 72 aa2.68□□□□□ -1.98
KPNA6-204ENST00000471599 KRTAP19-5Q3LI72 72 aa2.68□□□□□ -1.98
KPNA6-204ENST00000471599 KRTAP9-6A8MVA2 160 aa2.67□□□□□ -1.98
KPNA6-204ENST00000471599 PRM1P04553 51 aa2.65□□□□□ -1.98
KPNA6-204ENST00000471599 LCE4AQ5TA78 99 aa2.65□□□□□ -1.99
KPNA6-204ENST00000471599 NEBP20929 6669 aa2.65□□□□□ -1.99
KPNA6-204ENST00000471599 MDN1Q9NU22 5596 aa2.63□□□□□ -1.99
KPNA6-204ENST00000471599 LCE5AQ5TCM9 118 aa2.6□□□□□ -1.99
KPNA6-204ENST00000471599 KRTAP4-7Q9BYR0 210 aa2.59□□□□□ -1.99
KPNA6-204ENST00000471599 KRTAP9-9Q9BYP9 154 aa2.58□□□□□ -2
KPNA6-204ENST00000471599 KRTAP9-4Q9BYQ2 154 aa2.58□□□□□ -2
KPNA6-204ENST00000471599 KRTAP4-12Q9BQ66 201 aa2.57□□□□□ -2
KPNA6-204ENST00000471599 LCE3EQ5T5B0 92 aa2.56□□□□□ -2
KPNA6-204ENST00000471599 KRTAP19-7Q3SYF9 63 aa2.54□□□□□ -2
KPNA6-204ENST00000471599 KRTAP4-3Q9BYR4 195 aa2.49□□□□□ -2.01
KPNA6-204ENST00000471599 MT4P47944 62 aa2.49□□□□□ -2.01
KPNA6-204ENST00000471599 MT1EP04732 61 aa2.49□□□□□ -2.01
KPNA6-204ENST00000471599 LCE3DQ9BYE3 92 aa2.48□□□□□ -2.01
KPNA6-204ENST00000471599 KRTAP19-3Q7Z4W3 81 aa2.48□□□□□ -2.01
KPNA6-204ENST00000471599 MT1GP13640 62 aa2.47□□□□□ -2.01
KPNA6-204ENST00000471599 KRTAP4-9Q9BYQ8 210 aa2.46□□□□□ -2.02
KPNA6-204ENST00000471599 MT1LQ93083 61 aa2.4□□□□□ -2.02
KPNA6-204ENST00000471599 MT1MQ8N339 61 aa2.38□□□□□ -2.03
KPNA6-204ENST00000471599 KRTAP4-11Q9BYQ6 195 aa2.38□□□□□ -2.03
KPNA6-204ENST00000471599 KRTAP5-9P26371 169 aa2.35□□□□□ -2.03
KPNA6-204ENST00000471599 KRTAP5-5Q701N2 237 aaPredicted RBP2.31□□□□□ -2.04
KPNA6-204ENST00000471599 MT1AP04731 61 aa2.31□□□□□ -2.04
KPNA6-204ENST00000471599 MT3P25713 68 aa2.28□□□□□ -2.04
KPNA6-204ENST00000471599 KRTAP4-2Q9BYR5 136 aa2.26□□□□□ -2.05
KPNA6-204ENST00000471599 KRTAP6-2Q3LI66 62 aa2.25□□□□□ -2.05
KPNA6-204ENST00000471599 KRTAP6-1Q3LI64 71 aa2.09□□□□□ -2.08
KPNA6-204ENST00000471599 KRTAP5-3Q6L8H2 238 aa2.07□□□□□ -2.08
KPNA6-204ENST00000471599 HMCN1Q96RW7 5635 aa2.07□□□□□ -2.08
KPNA6-204ENST00000471599 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
KPNA6-204ENST00000471599 LCE1BQ5T7P3 118 aa2.01□□□□□ -2.09
KPNA6-204ENST00000471599 AHNAK2Q8IVF2 5795 aa2.01□□□□□ -2.09
KPNA6-204ENST00000471599 AHNAKQ09666 5890 aaKnown RBP2□□□□□ -2.09
KPNA6-204ENST00000471599 KRTAP20-2Q3LI61 65 aa1.98□□□□□ -2.09
KPNA6-204ENST00000471599 KRTAP5-10Q6L8G5 202 aa1.96□□□□□ -2.1
KPNA6-204ENST00000471599 KRTAP5-4Q6L8H1 288 aa1.95□□□□□ -2.1
KPNA6-204ENST00000471599 MUC5ACP98088 5654 aa1.93□□□□□ -2.1
KPNA6-204ENST00000471599 MUC5BQ9HC84 5762 aaPredicted RBP1.92□□□□□ -2.1
KPNA6-204ENST00000471599 KRTAP5-2Q701N4 177 aa1.91□□□□□ -2.1
KPNA6-204ENST00000471599 LCE1CQ5T751 118 aa1.9□□□□□ -2.11
KPNA6-204ENST00000471599 KRTAP5-1Q6L8H4 278 aa1.82□□□□□ -2.12
KPNA6-204ENST00000471599 KRTAP5-8O75690 187 aa1.72□□□□□ -2.13
KPNA6-204ENST00000471599 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.69□□□□□ -2.14
KPNA6-204ENST00000471599 KRTAP4-4Q9BYR3 166 aa1.55□□□□□ -2.16
KPNA6-204ENST00000471599 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
KPNA6-204ENST00000471599 KRTAP5-11Q6L8G4 156 aa1.49□□□□□ -2.17
KPNA6-204ENST00000471599 KRTAP21-2Q3LI59 83 aa1.47□□□□□ -2.17
KPNA6-204ENST00000471599 PHGR1C9JFL3 82 aa1.4□□□□□ -2.18
KPNA6-204ENST00000471599 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms