RNA–Protein interactions for RNA: ENST00000471303.6

PAX6-215, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,423 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-215ENST00000471303 KRTAP10-5P60370 271 aa4.67□□□□□ -1.66
PAX6-215ENST00000471303 MT1XP80297 61 aa4.67□□□□□ -1.66
PAX6-215ENST00000471303 LCE3AQ5TA76 89 aa4.66□□□□□ -1.66
PAX6-215ENST00000471303 USH2AO75445 5202 aa4.64□□□□□ -1.67
PAX6-215ENST00000471303 KRTAP9-2Q9BYQ4 174 aa4.54□□□□□ -1.68
PAX6-215ENST00000471303 KMT2DO14686 5537 aa4.5□□□□□ -1.69
PAX6-215ENST00000471303 KRTAP8-1Q8IUC2 63 aa4.47□□□□□ -1.69
PAX6-215ENST00000471303 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.46□□□□□ -1.69
PAX6-215ENST00000471303 KRTAP4-8Q9BYQ9 185 aa4.43□□□□□ -1.7
PAX6-215ENST00000471303 KRTAP12-3P60328 96 aa4.41□□□□□ -1.7
PAX6-215ENST00000471303 KRTAP4-8A0A0G2JLE6 195 aa4.36□□□□□ -1.71
PAX6-215ENST00000471303 FSIP2Q5CZC0 6907 aa4.35□□□□□ -1.71
PAX6-215ENST00000471303 KRTAP19-5Q3LI72 72 aa4.32□□□□□ -1.72
PAX6-215ENST00000471303 LCE3BQ5TA77 95 aa4.32□□□□□ -1.72
PAX6-215ENST00000471303 CRCT1Q9UGL9 99 aa4.27□□□□□ -1.73
PAX6-215ENST00000471303 SSPOA2VEC9 5147 aa4.27□□□□□ -1.73
PAX6-215ENST00000471303 KRTAP2-3P0C7H8 128 aa4.19□□□□□ -1.74
PAX6-215ENST00000471303 KRTAP2-4Q9BYR9 128 aa4.19□□□□□ -1.74
PAX6-215ENST00000471303 KRTAP2-1Q9BYU5 128 aa4.19□□□□□ -1.74
PAX6-215ENST00000471303 KRTAP19-7Q3SYF9 63 aa4.16□□□□□ -1.74
PAX6-215ENST00000471303 KRTAP4-7Q9BYR0 210 aa4.12□□□□□ -1.75
PAX6-215ENST00000471303 KRTAP19-6Q3LI70 58 aa4.1□□□□□ -1.75
PAX6-215ENST00000471303 KRTAP9-6A8MVA2 160 aa4.05□□□□□ -1.76
PAX6-215ENST00000471303 MT1EP04732 61 aa4.04□□□□□ -1.76
PAX6-215ENST00000471303 FCGBPQ9Y6R7 5405 aaPredicted RBP4.03□□□□□ -1.76
PAX6-215ENST00000471303 MT1LQ93083 61 aa4.01□□□□□ -1.77
PAX6-215ENST00000471303 MUC12Q9UKN1 5478 aa3.99□□□□□ -1.77
PAX6-215ENST00000471303 KRTAP4-3Q9BYR4 195 aa3.91□□□□□ -1.78
PAX6-215ENST00000471303 MACF1Q9UPN3 7388 aaKnown RBP3.87□□□□□ -1.79
PAX6-215ENST00000471303 PRM1P04553 51 aa3.85□□□□□ -1.79
PAX6-215ENST00000471303 DSTQ03001 7570 aaKnown RBP3.83□□□□□ -1.8
PAX6-215ENST00000471303 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
PAX6-215ENST00000471303 KRTAP4-9Q9BYQ8 210 aa3.8□□□□□ -1.8
PAX6-215ENST00000471303 MT1GP13640 62 aa3.79□□□□□ -1.8
PAX6-215ENST00000471303 KRTAP19-3Q7Z4W3 81 aa3.79□□□□□ -1.8
PAX6-215ENST00000471303 MT1MQ8N339 61 aa3.79□□□□□ -1.8
PAX6-215ENST00000471303 SYNE2Q8WXH0 6885 aaKnown RBP3.78□□□□□ -1.8
PAX6-215ENST00000471303 SPRR2FQ96RM1 72 aa3.78□□□□□ -1.8
PAX6-215ENST00000471303 KRTAP4-2Q9BYR5 136 aa3.78□□□□□ -1.81
PAX6-215ENST00000471303 KRTAP5-3Q6L8H2 238 aa3.72□□□□□ -1.81
PAX6-215ENST00000471303 MDN1Q9NU22 5596 aa3.69□□□□□ -1.82
PAX6-215ENST00000471303 NEBP20929 6669 aa3.57□□□□□ -1.84
PAX6-215ENST00000471303 LCE1CQ5T751 118 aa3.55□□□□□ -1.84
PAX6-215ENST00000471303 LCE1BQ5T7P3 118 aa3.55□□□□□ -1.84
PAX6-215ENST00000471303 KRTAP5-9P26371 169 aa3.51□□□□□ -1.85
PAX6-215ENST00000471303 SPRR2EP22531 72 aa3.48□□□□□ -1.85
PAX6-215ENST00000471303 SPRR2BP35325 72 aa3.48□□□□□ -1.85
PAX6-215ENST00000471303 SPRR2AP35326 72 aa3.48□□□□□ -1.85
PAX6-215ENST00000471303 SYNE1Q8NF91 8797 aaKnown RBP3.47□□□□□ -1.85
PAX6-215ENST00000471303 KRTAP20-1Q3LI63 56 aa3.46□□□□□ -1.85
PAX6-215ENST00000471303 KRTAP5-5Q701N2 237 aaPredicted RBP3.44□□□□□ -1.86
PAX6-215ENST00000471303 KRTAP6-1Q3LI64 71 aa3.44□□□□□ -1.86
PAX6-215ENST00000471303 MT1AP04731 61 aa3.34□□□□□ -1.87
PAX6-215ENST00000471303 SPRR2DP22532 72 aa3.32□□□□□ -1.88
PAX6-215ENST00000471303 MUC19Q7Z5P9 8384 aa3.29□□□□□ -1.88
PAX6-215ENST00000471303 OBSCNQ5VST9 7968 aa3.21□□□□□ -1.9
PAX6-215ENST00000471303 KRTAP6-2Q3LI66 62 aa3.11□□□□□ -1.91
PAX6-215ENST00000471303 GPR98Q8WXG9 6306 aa3.06□□□□□ -1.92
PAX6-215ENST00000471303 KRTAP5-4Q6L8H1 288 aa3□□□□□ -1.93
PAX6-215ENST00000471303 MT4P47944 62 aa2.98□□□□□ -1.93
PAX6-215ENST00000471303 HMCN1Q96RW7 5635 aa2.85□□□□□ -1.95
PAX6-215ENST00000471303 KRTAP20-2Q3LI61 65 aa2.85□□□□□ -1.95
PAX6-215ENST00000471303 KRTAP5-2Q701N4 177 aa2.77□□□□□ -1.97
PAX6-215ENST00000471303 KRTAP21-1Q3LI58 79 aa2.76□□□□□ -1.97
PAX6-215ENST00000471303 AHNAK2Q8IVF2 5795 aa2.74□□□□□ -1.97
PAX6-215ENST00000471303 KRTAP5-10Q6L8G5 202 aa2.73□□□□□ -1.97
PAX6-215ENST00000471303 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.72□□□□□ -1.97
PAX6-215ENST00000471303 KRTAP5-11Q6L8G4 156 aa2.71□□□□□ -1.98
PAX6-215ENST00000471303 KRTAP5-7Q6L8G8 165 aa2.66□□□□□ -1.98
PAX6-215ENST00000471303 MUC5ACP98088 5654 aa2.58□□□□□ -2
PAX6-215ENST00000471303 KRTAP5-1Q6L8H4 278 aa2.51□□□□□ -2.01
PAX6-215ENST00000471303 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
PAX6-215ENST00000471303 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
PAX6-215ENST00000471303 KRTAP5-8O75690 187 aa2.35□□□□□ -2.03
PAX6-215ENST00000471303 KRTAP21-2Q3LI59 83 aa2.21□□□□□ -2.06
PAX6-215ENST00000471303 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
PAX6-215ENST00000471303 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
PAX6-215ENST00000471303 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 86 ms