RNA–Protein interactions for RNA: ENST00000471117.5

FDPS-209, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-209ENST00000471117 MT1XP80297 61 aa3.43□□□□□ -1.86
FDPS-209ENST00000471117 DSTQ03001 7570 aaKnown RBP3.41□□□□□ -1.86
FDPS-209ENST00000471117 TNP1P09430 55 aa3.41□□□□□ -1.86
FDPS-209ENST00000471117 SPRR5A0A1B0GTR4 108 aa3.39□□□□□ -1.87
FDPS-209ENST00000471117 KRTAP5-10Q6L8G5 202 aa3.36□□□□□ -1.87
FDPS-209ENST00000471117 AHNAK2Q8IVF2 5795 aa3.31□□□□□ -1.88
FDPS-209ENST00000471117 KRTAP23-1A1A580 65 aa3.31□□□□□ -1.88
FDPS-209ENST00000471117 KRTAP5-7Q6L8G8 165 aa3.31□□□□□ -1.88
FDPS-209ENST00000471117 PP632Q6XCG6 107 aa3.31□□□□□ -1.88
FDPS-209ENST00000471117 HMCN1Q96RW7 5635 aa3.3□□□□□ -1.88
FDPS-209ENST00000471117 KRTAP10-7P60409 375 aaPredicted RBP3.3□□□□□ -1.88
FDPS-209ENST00000471117 LCE1DQ5T752 114 aa3.27□□□□□ -1.89
FDPS-209ENST00000471117 KRTAP8-1Q8IUC2 63 aa3.27□□□□□ -1.89
FDPS-209ENST00000471117 KRTAP10-12P60413 245 aa3.26□□□□□ -1.89
FDPS-209ENST00000471117 LCE3AQ5TA76 89 aa3.26□□□□□ -1.89
FDPS-209ENST00000471117 MT4P47944 62 aa3.18□□□□□ -1.9
FDPS-209ENST00000471117 KRTAP4-8A0A0G2JLE6 195 aa3.17□□□□□ -1.9
FDPS-209ENST00000471117 KRTAP4-8Q9BYQ9 185 aa3.17□□□□□ -1.9
FDPS-209ENST00000471117 KRTAP12-3P60328 96 aa3.14□□□□□ -1.91
FDPS-209ENST00000471117 KRTAP5-3Q6L8H2 238 aa3.13□□□□□ -1.91
FDPS-209ENST00000471117 KRTAP19-5Q3LI72 72 aa3.11□□□□□ -1.91
FDPS-209ENST00000471117 KRTAP15-1Q3LI76 137 aa3.08□□□□□ -1.92
FDPS-209ENST00000471117 KRTAP19-7Q3SYF9 63 aa3.06□□□□□ -1.92
FDPS-209ENST00000471117 MT1EP04732 61 aa3.02□□□□□ -1.93
FDPS-209ENST00000471117 LCE4AQ5TA78 99 aa3.01□□□□□ -1.93
FDPS-209ENST00000471117 KRTAP4-6Q9BYQ5 205 aa3□□□□□ -1.93
FDPS-209ENST00000471117 AHNAKQ09666 5890 aaKnown RBP2.98□□□□□ -1.93
FDPS-209ENST00000471117 MT1LQ93083 61 aa2.95□□□□□ -1.94
FDPS-209ENST00000471117 LCE3CQ5T5A8 94 aa2.93□□□□□ -1.94
FDPS-209ENST00000471117 KRTAP19-3Q7Z4W3 81 aa2.93□□□□□ -1.94
FDPS-209ENST00000471117 KRTAP19-4Q3LI73 84 aa2.91□□□□□ -1.94
FDPS-209ENST00000471117 MT1GP13640 62 aa2.9□□□□□ -1.95
FDPS-209ENST00000471117 MUC5ACP98088 5654 aa2.89□□□□□ -1.95
FDPS-209ENST00000471117 LCE5AQ5TCM9 118 aa2.88□□□□□ -1.95
FDPS-209ENST00000471117 LUZP6Q538Z0 58 aa2.87□□□□□ -1.95
FDPS-209ENST00000471117 KRTAP4-7Q9BYR0 210 aa2.87□□□□□ -1.95
FDPS-209ENST00000471117 MT1MQ8N339 61 aa2.86□□□□□ -1.95
FDPS-209ENST00000471117 MUC5BQ9HC84 5762 aaPredicted RBP2.85□□□□□ -1.95
FDPS-209ENST00000471117 NDUFAF8A1L188 74 aa2.83□□□□□ -1.96
FDPS-209ENST00000471117 KRTAP5-4Q6L8H1 288 aa2.83□□□□□ -1.96
FDPS-209ENST00000471117 KRTAP4-3Q9BYR4 195 aa2.79□□□□□ -1.96
FDPS-209ENST00000471117 KRTAP9-6A8MVA2 160 aa2.78□□□□□ -1.96
FDPS-209ENST00000471117 KRTAP20-2Q3LI61 65 aa2.75□□□□□ -1.97
FDPS-209ENST00000471117 LOC100996750A0A140TA64 210 aa2.69□□□□□ -1.98
FDPS-209ENST00000471117 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
FDPS-209ENST00000471117 KRTAP4-11Q9BYQ6 195 aa2.69□□□□□ -1.98
FDPS-209ENST00000471117 KRTAP9-9Q9BYP9 154 aa2.6□□□□□ -1.99
FDPS-209ENST00000471117 KRTAP5-5Q701N2 237 aaPredicted RBP2.57□□□□□ -2
FDPS-209ENST00000471117 KRTAP12-4P60329 112 aa2.53□□□□□ -2
FDPS-209ENST00000471117 SYNE1Q8NF91 8797 aaKnown RBP2.53□□□□□ -2
FDPS-209ENST00000471117 H3BS24 57 aa2.52□□□□□ -2.01
FDPS-209ENST00000471117 MT1AP04731 61 aa2.51□□□□□ -2.01
FDPS-209ENST00000471117 KRTAP5-2Q701N4 177 aa2.5□□□□□ -2.01
FDPS-209ENST00000471117 A0A0A0MQY5 61 aa2.49□□□□□ -2.01
FDPS-209ENST00000471117 KRTAP6-1Q3LI64 71 aa2.49□□□□□ -2.01
FDPS-209ENST00000471117 KRTAP9-4Q9BYQ2 154 aa2.4□□□□□ -2.03
FDPS-209ENST00000471117 OBSCNQ5VST9 7968 aa2.39□□□□□ -2.03
FDPS-209ENST00000471117 INE1O15225 51 aa2.32□□□□□ -2.04
FDPS-209ENST00000471117 KRTAP6-2Q3LI66 62 aa2.3□□□□□ -2.04
FDPS-209ENST00000471117 MT3P25713 68 aa2.29□□□□□ -2.04
FDPS-209ENST00000471117 KRTAP5-1Q6L8H4 278 aa2.26□□□□□ -2.05
FDPS-209ENST00000471117 LCE3DQ9BYE3 92 aa2.2□□□□□ -2.06
FDPS-209ENST00000471117 KRTAP4-2Q9BYR5 136 aa2.17□□□□□ -2.06
FDPS-209ENST00000471117 LCE3EQ5T5B0 92 aa2.15□□□□□ -2.07
FDPS-209ENST00000471117 KRTAP4-12Q9BQ66 201 aa2.04□□□□□ -2.08
FDPS-209ENST00000471117 PHGR1C9JFL3 82 aa2.02□□□□□ -2.09
FDPS-209ENST00000471117 LCE1EQ5T753 118 aa2.02□□□□□ -2.09
FDPS-209ENST00000471117 LCE1BQ5T7P3 118 aa1.92□□□□□ -2.1
FDPS-209ENST00000471117 PRM1P04553 51 aa1.89□□□□□ -2.11
FDPS-209ENST00000471117 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
FDPS-209ENST00000471117 KRTAP5-11Q6L8G4 156 aa1.84□□□□□ -2.11
FDPS-209ENST00000471117 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.74□□□□□ -2.13
FDPS-209ENST00000471117 LCE1FQ5T754 118 aa1.73□□□□□ -2.13
FDPS-209ENST00000471117 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
FDPS-209ENST00000471117 MUC19Q7Z5P9 8384 aa1.52□□□□□ -2.17
FDPS-209ENST00000471117 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
FDPS-209ENST00000471117 KRTAP4-4Q9BYR3 166 aa1.46□□□□□ -2.18
FDPS-209ENST00000471117 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 10.4 ms