RNA–Protein interactions for RNA: ENST00000470944.1

SOD1-203, Transcript of superoxide dismutase 1, humanhuman

TSL 2

Gene SOD1, Length 1,746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-203ENST00000470944 SPRR2EP22531 72 aa10.5□□□□□ -0.73
SOD1-203ENST00000470944 SPRR2BP35325 72 aa10.5□□□□□ -0.73
SOD1-203ENST00000470944 SPRR2AP35326 72 aa10.5□□□□□ -0.73
SOD1-203ENST00000470944 NEBP20929 6669 aa10.49□□□□□ -0.73
SOD1-203ENST00000470944 PP632Q6XCG6 107 aa10.49□□□□□ -0.73
SOD1-203ENST00000470944 KRTAP19-3Q7Z4W3 81 aa10.33□□□□□ -0.76
SOD1-203ENST00000470944 MT1LQ93083 61 aa10.32□□□□□ -0.76
SOD1-203ENST00000470944 LCE5AQ5TCM9 118 aa10.25□□□□□ -0.77
SOD1-203ENST00000470944 MT1GP13640 62 aa10.16□□□□□ -0.78
SOD1-203ENST00000470944 SPRR2DP22532 72 aa10.13□□□□□ -0.79
SOD1-203ENST00000470944 KRTAP15-1Q3LI76 137 aa10.13□□□□□ -0.79
SOD1-203ENST00000470944 MT1MQ8N339 61 aa10.05□□□□□ -0.8
SOD1-203ENST00000470944 KRTAP4-7Q9BYR0 210 aa9.97□□□□□ -0.81
SOD1-203ENST00000470944 KRTAP4-3Q9BYR4 195 aa9.88□□□□□ -0.83
SOD1-203ENST00000470944 KRTAP20-1Q3LI63 56 aa9.82□□□□□ -0.84
SOD1-203ENST00000470944 KRTAP19-4Q3LI73 84 aa9.82□□□□□ -0.84
SOD1-203ENST00000470944 DSTQ03001 7570 aaKnown RBP9.81□□□□□ -0.84
SOD1-203ENST00000470944 KRTAP2-3P0C7H8 128 aa9.8□□□□□ -0.84
SOD1-203ENST00000470944 KRTAP2-4Q9BYR9 128 aa9.8□□□□□ -0.84
SOD1-203ENST00000470944 LCE3CQ5T5A8 94 aa9.79□□□□□ -0.84
SOD1-203ENST00000470944 LCE3BQ5TA77 95 aa9.79□□□□□ -0.84
SOD1-203ENST00000470944 KRTAP2-2Q9BYT5 123 aa9.56□□□□□ -0.88
SOD1-203ENST00000470944 KRTAP2-1Q9BYU5 128 aa9.56□□□□□ -0.88
SOD1-203ENST00000470944 LOC100996750A0A140TA64 210 aa9.39□□□□□ -0.91
SOD1-203ENST00000470944 SPRR5A0A1B0GTR4 108 aa9.34□□□□□ -0.91
SOD1-203ENST00000470944 KRTAP9-6A8MVA2 160 aa9.31□□□□□ -0.92
SOD1-203ENST00000470944 NDUFAF8A1L188 74 aa9.3□□□□□ -0.92
SOD1-203ENST00000470944 LUZP6Q538Z0 58 aa9.19□□□□□ -0.94
SOD1-203ENST00000470944 KRTAP5-5Q701N2 237 aaPredicted RBP9.15□□□□□ -0.94
SOD1-203ENST00000470944 KRTAP5-4Q6L8H1 288 aa9.02□□□□□ -0.96
SOD1-203ENST00000470944 LCE4AQ5TA78 99 aa8.96□□□□□ -0.98
SOD1-203ENST00000470944 H3BS24 57 aa8.94□□□□□ -0.98
SOD1-203ENST00000470944 KRTAP4-9Q9BYQ8 210 aa8.94□□□□□ -0.98
SOD1-203ENST00000470944 MT4P47944 62 aa8.84□□□□□ -0.99
SOD1-203ENST00000470944 LCE1DQ5T752 114 aa8.8□□□□□ -1
SOD1-203ENST00000470944 MT1AP04731 61 aa8.76□□□□□ -1.01
SOD1-203ENST00000470944 KRTAP4-6Q9BYQ5 205 aa8.72□□□□□ -1.01
SOD1-203ENST00000470944 KRTAP6-1Q3LI64 71 aa8.71□□□□□ -1.01
SOD1-203ENST00000470944 HMCN1Q96RW7 5635 aa8.7□□□□□ -1.02
SOD1-203ENST00000470944 SYNE1Q8NF91 8797 aaKnown RBP8.66□□□□□ -1.02
SOD1-203ENST00000470944 KRTAP12-4P60329 112 aa8.6□□□□□ -1.03
SOD1-203ENST00000470944 KRTAP20-2Q3LI61 65 aa8.47□□□□□ -1.05
SOD1-203ENST00000470944 KRTAP9-4Q9BYQ2 154 aa8.38□□□□□ -1.07
SOD1-203ENST00000470944 A0A0A0MQY5 61 aa8.32□□□□□ -1.08
SOD1-203ENST00000470944 KRTAP5-3Q6L8H2 238 aa8.2□□□□□ -1.1
SOD1-203ENST00000470944 KRTAP6-2Q3LI66 62 aa8.15□□□□□ -1.11
SOD1-203ENST00000470944 KRTAP5-2Q701N4 177 aa8.08□□□□□ -1.12
SOD1-203ENST00000470944 AHNAK2Q8IVF2 5795 aa7.98□□□□□ -1.13
SOD1-203ENST00000470944 MT3P25713 68 aa7.95□□□□□ -1.14
SOD1-203ENST00000470944 INE1O15225 51 aa7.75□□□□□ -1.17
SOD1-203ENST00000470944 GPR98Q8WXG9 6306 aa7.73□□□□□ -1.17
SOD1-203ENST00000470944 KRTAP5-10Q6L8G5 202 aa7.68□□□□□ -1.18
SOD1-203ENST00000470944 OBSCNQ5VST9 7968 aa7.54□□□□□ -1.2
SOD1-203ENST00000470944 KRTAP4-11Q9BYQ6 195 aa7.5□□□□□ -1.21
SOD1-203ENST00000470944 KRTAP5-8O75690 187 aa7.24□□□□□ -1.25
SOD1-203ENST00000470944 LCE3DQ9BYE3 92 aa7.24□□□□□ -1.25
SOD1-203ENST00000470944 KRTAP5-7Q6L8G8 165 aa7.21□□□□□ -1.26
SOD1-203ENST00000470944 KRTAP5-1Q6L8H4 278 aa7.1□□□□□ -1.27
SOD1-203ENST00000470944 LCE1EQ5T753 118 aa7.06□□□□□ -1.28
SOD1-203ENST00000470944 LCE3EQ5T5B0 92 aa6.95□□□□□ -1.3
SOD1-203ENST00000470944 MUC5ACP98088 5654 aa6.89□□□□□ -1.31
SOD1-203ENST00000470944 KRTAP4-2Q9BYR5 136 aa6.66□□□□□ -1.34
SOD1-203ENST00000470944 LCE1BQ5T7P3 118 aa6.65□□□□□ -1.34
SOD1-203ENST00000470944 KRTAP9-9Q9BYP9 154 aa6.64□□□□□ -1.35
SOD1-203ENST00000470944 LCE1CQ5T751 118 aa6.58□□□□□ -1.36
SOD1-203ENST00000470944 MUC5BQ9HC84 5762 aaPredicted RBP6.47□□□□□ -1.37
SOD1-203ENST00000470944 AHNAKQ09666 5890 aaKnown RBP6.26□□□□□ -1.41
SOD1-203ENST00000470944 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.09□□□□□ -1.43
SOD1-203ENST00000470944 PRM1P04553 51 aa5.88□□□□□ -1.47
SOD1-203ENST00000470944 KRTAP5-11Q6L8G4 156 aa5.87□□□□□ -1.47
SOD1-203ENST00000470944 KRTAP4-12Q9BQ66 201 aa5.74□□□□□ -1.49
SOD1-203ENST00000470944 KRTAP21-2Q3LI59 83 aa5.73□□□□□ -1.49
SOD1-203ENST00000470944 LCE1FQ5T754 118 aa5.43□□□□□ -1.54
SOD1-203ENST00000470944 KRTAP4-4Q9BYR3 166 aa5.16□□□□□ -1.58
SOD1-203ENST00000470944 PHGR1C9JFL3 82 aa5.06□□□□□ -1.6
SOD1-203ENST00000470944 MUC19Q7Z5P9 8384 aa4.55□□□□□ -1.68
SOD1-203ENST00000470944 KRTAP21-1Q3LI58 79 aa3.73□□□□□ -1.81
SOD1-203ENST00000470944 MUC16Q8WXI7 14507 aa3.12□□□□□ -1.91
Retrieved 78 of 20,778 RNA–protein pairs in 7.6 ms