RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 COX6B2Q6YFQ2 88 aa1.28□□□□□ -2.2
PRPF3-204ENST00000470824 MRPL34Q9BQ48 92 aaKnown RBP1.28□□□□□ -2.2
PRPF3-204ENST00000470824 FSIP2Q5CZC0 6907 aa1.27□□□□□ -2.21
PRPF3-204ENST00000470824 H0YAA0 97 aa1.25□□□□□ -2.21
PRPF3-204ENST00000470824 CLPSL2Q6UWE3 100 aa1.25□□□□□ -2.21
PRPF3-204ENST00000470824 CRCT1Q9UGL9 99 aa1.25□□□□□ -2.21
PRPF3-204ENST00000470824 RPL37P61927 97 aaKnown RBP1.24□□□□□ -2.21
PRPF3-204ENST00000470824 MMP24-AS1A0A0U1RRL7 71 aa1.23□□□□□ -2.21
PRPF3-204ENST00000470824 H1FX-AS1Q4G0G2 97 aa1.23□□□□□ -2.21
PRPF3-204ENST00000470824 SPINK6Q6UWN8 80 aa1.22□□□□□ -2.21
PRPF3-204ENST00000470824 A0A096LNI7 61 aa1.21□□□□□ -2.22
PRPF3-204ENST00000470824 DEFB105AQ8NG35 78 aa1.21□□□□□ -2.22
PRPF3-204ENST00000470824 C10orf95Q9H7T3 257 aa1.21□□□□□ -2.22
PRPF3-204ENST00000470824 KRTAP4-1Q9BYQ7 146 aa1.2□□□□□ -2.22
PRPF3-204ENST00000470824 FLGP20930 4061 aaPredicted RBP1.19□□□□□ -2.22
PRPF3-204ENST00000470824 PRLHP81277 87 aa1.18□□□□□ -2.22
PRPF3-204ENST00000470824 MACF1Q9UPN3 7388 aaKnown RBP1.16□□□□□ -2.22
PRPF3-204ENST00000470824 SSPOA2VEC9 5147 aa1.15□□□□□ -2.23
PRPF3-204ENST00000470824 USH2AO75445 5202 aa1.15□□□□□ -2.23
PRPF3-204ENST00000470824 SPINK1P00995 79 aa1.14□□□□□ -2.23
PRPF3-204ENST00000470824 MT1HP80294 61 aa1.14□□□□□ -2.23
PRPF3-204ENST00000470824 SYNE2Q8WXH0 6885 aaKnown RBP1.13□□□□□ -2.23
PRPF3-204ENST00000470824 M0R2T5 61 aa1.13□□□□□ -2.23
PRPF3-204ENST00000470824 SPRR1AP35321 89 aa1.13□□□□□ -2.23
PRPF3-204ENST00000470824 S4R3F8 94 aa1.12□□□□□ -2.23
PRPF3-204ENST00000470824 SPRR1BP22528 89 aa1.11□□□□□ -2.23
PRPF3-204ENST00000470824 KRTAP19-2Q3LHN2 52 aa1.11□□□□□ -2.23
PRPF3-204ENST00000470824 FCGBPQ9Y6R7 5405 aaPredicted RBP1.1□□□□□ -2.23
PRPF3-204ENST00000470824 A0A0D9SG42 100 aa1.09□□□□□ -2.23
PRPF3-204ENST00000470824 MUC12Q9UKN1 5478 aa1.09□□□□□ -2.24
PRPF3-204ENST00000470824 C9orf92A6NGG3 77 aa1.08□□□□□ -2.24
PRPF3-204ENST00000470824 GPR98Q8WXG9 6306 aa1.07□□□□□ -2.24
PRPF3-204ENST00000470824 NEBP20929 6669 aa1.07□□□□□ -2.24
PRPF3-204ENST00000470824 RPS29P62273 56 aaKnown RBP1.05□□□□□ -2.24
PRPF3-204ENST00000470824 KRTAP20-1Q3LI63 56 aa1.04□□□□□ -2.24
PRPF3-204ENST00000470824 MT2AP02795 61 aa1.03□□□□□ -2.24
PRPF3-204ENST00000470824 MT1FP04733 61 aa1.03□□□□□ -2.24
PRPF3-204ENST00000470824 M0QZ58 72 aa1.02□□□□□ -2.25
PRPF3-204ENST00000470824 KMT2DO14686 5537 aa1.01□□□□□ -2.25
PRPF3-204ENST00000470824 KRTAP19-6Q3LI70 58 aa1.01□□□□□ -2.25
PRPF3-204ENST00000470824 MDN1Q9NU22 5596 aa1□□□□□ -2.25
PRPF3-204ENST00000470824 KRTAP2-3P0C7H8 128 aa0.94□□□□□ -2.26
PRPF3-204ENST00000470824 KRTAP2-4Q9BYR9 128 aa0.94□□□□□ -2.26
PRPF3-204ENST00000470824 SPRR2EP22531 72 aa0.93□□□□□ -2.26
PRPF3-204ENST00000470824 SPRR2BP35325 72 aa0.93□□□□□ -2.26
PRPF3-204ENST00000470824 SPRR2AP35326 72 aa0.93□□□□□ -2.26
PRPF3-204ENST00000470824 TNP1P09430 55 aa0.92□□□□□ -2.26
PRPF3-204ENST00000470824 SPRR2FQ96RM1 72 aa0.92□□□□□ -2.26
PRPF3-204ENST00000470824 KRTAP2-1Q9BYU5 128 aa0.92□□□□□ -2.26
PRPF3-204ENST00000470824 AHNAK2Q8IVF2 5795 aa0.92□□□□□ -2.26
PRPF3-204ENST00000470824 MT1BP07438 61 aa0.91□□□□□ -2.26
PRPF3-204ENST00000470824 DSTQ03001 7570 aaKnown RBP0.91□□□□□ -2.26
PRPF3-204ENST00000470824 SPRR2DP22532 72 aa0.9□□□□□ -2.27
PRPF3-204ENST00000470824 KRTAP19-8Q3LI54 63 aa0.87□□□□□ -2.27
PRPF3-204ENST00000470824 KRTAP8-1Q8IUC2 63 aa0.87□□□□□ -2.27
PRPF3-204ENST00000470824 SPRR2GQ9BYE4 73 aa0.85□□□□□ -2.27
PRPF3-204ENST00000470824 AHNAKQ09666 5890 aaKnown RBP0.85□□□□□ -2.27
PRPF3-204ENST00000470824 MT1XP80297 61 aa0.82□□□□□ -2.28
PRPF3-204ENST00000470824 MT4P47944 62 aa0.81□□□□□ -2.28
PRPF3-204ENST00000470824 KRTAP5-10Q6L8G5 202 aa0.8□□□□□ -2.28
PRPF3-204ENST00000470824 MUC5BQ9HC84 5762 aaPredicted RBP0.8□□□□□ -2.28
PRPF3-204ENST00000470824 KRTAP19-3Q7Z4W3 81 aa0.76□□□□□ -2.29
PRPF3-204ENST00000470824 MUC5ACP98088 5654 aa0.75□□□□□ -2.29
PRPF3-204ENST00000470824 SYNE1Q8NF91 8797 aaKnown RBP0.74□□□□□ -2.29
PRPF3-204ENST00000470824 MT1EP04732 61 aa0.74□□□□□ -2.29
PRPF3-204ENST00000470824 KRTAP19-7Q3SYF9 63 aa0.73□□□□□ -2.29
PRPF3-204ENST00000470824 PRM1P04553 51 aa0.71□□□□□ -2.3
PRPF3-204ENST00000470824 KRTAP20-2Q3LI61 65 aa0.71□□□□□ -2.3
PRPF3-204ENST00000470824 MT1MQ8N339 61 aa0.71□□□□□ -2.3
PRPF3-204ENST00000470824 MT1GP13640 62 aa0.7□□□□□ -2.3
PRPF3-204ENST00000470824 KRTAP19-5Q3LI72 72 aa0.69□□□□□ -2.3
PRPF3-204ENST00000470824 MT1LQ93083 61 aa0.68□□□□□ -2.3
PRPF3-204ENST00000470824 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
PRPF3-204ENST00000470824 MT1AP04731 61 aa0.62□□□□□ -2.31
PRPF3-204ENST00000470824 KRTAP6-1Q3LI64 71 aa0.59□□□□□ -2.31
PRPF3-204ENST00000470824 KRTAP6-2Q3LI66 62 aa0.58□□□□□ -2.32
PRPF3-204ENST00000470824 KRTAP21-1Q3LI58 79 aa0.54□□□□□ -2.32
PRPF3-204ENST00000470824 PHGR1C9JFL3 82 aa0.51□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 162 ms