RNA–Protein interactions for RNA: ENST00000470470.1

CHD6-206, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 5

Gene CHD6, Length 1,349 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-206ENST00000470470 FLGP20930 4061 aaPredicted RBP2.84□□□□□ -1.95
CHD6-206ENST00000470470 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
CHD6-206ENST00000470470 KRTAP5-5Q701N2 237 aaPredicted RBP2.83□□□□□ -1.96
CHD6-206ENST00000470470 RNF213Q63HN8 5207 aa2.82□□□□□ -1.96
CHD6-206ENST00000470470 C10orf95Q9H7T3 257 aa2.82□□□□□ -1.96
CHD6-206ENST00000470470 SPRR2GQ9BYE4 73 aa2.77□□□□□ -1.97
CHD6-206ENST00000470470 PP632Q6XCG6 107 aa2.76□□□□□ -1.97
CHD6-206ENST00000470470 MT1HP80294 61 aa2.74□□□□□ -1.97
CHD6-206ENST00000470470 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
CHD6-206ENST00000470470 LCE1BQ5T7P3 118 aa2.73□□□□□ -1.97
CHD6-206ENST00000470470 MT2AP02795 61 aa2.69□□□□□ -1.98
CHD6-206ENST00000470470 TNP1P09430 55 aa2.69□□□□□ -1.98
CHD6-206ENST00000470470 PLAC4Q8WY50 150 aa2.69□□□□□ -1.98
CHD6-206ENST00000470470 M0R2T5 61 aa2.68□□□□□ -1.98
CHD6-206ENST00000470470 KRTAP19-8Q3LI54 63 aa2.68□□□□□ -1.98
CHD6-206ENST00000470470 PRO2289Q9P1D8 64 aa2.68□□□□□ -1.98
CHD6-206ENST00000470470 MT1FP04733 61 aa2.67□□□□□ -1.98
CHD6-206ENST00000470470 MUC2Q02817 5179 aa2.66□□□□□ -1.98
CHD6-206ENST00000470470 KRTAP10-10P60014 251 aa2.66□□□□□ -1.98
CHD6-206ENST00000470470 FAT4Q6V0I7 4981 aa2.65□□□□□ -1.98
CHD6-206ENST00000470470 MT1BP07438 61 aa2.6□□□□□ -1.99
CHD6-206ENST00000470470 SPRR5A0A1B0GTR4 108 aa2.55□□□□□ -2
CHD6-206ENST00000470470 MT1XP80297 61 aa2.55□□□□□ -2
CHD6-206ENST00000470470 KRTAP8-1Q8IUC2 63 aa2.54□□□□□ -2
CHD6-206ENST00000470470 INE1O15225 51 aa2.53□□□□□ -2
CHD6-206ENST00000470470 KRTAP12-3P60328 96 aa2.43□□□□□ -2.02
CHD6-206ENST00000470470 FSIP2Q5CZC0 6907 aa2.42□□□□□ -2.02
CHD6-206ENST00000470470 CRCT1Q9UGL9 99 aa2.34□□□□□ -2.04
CHD6-206ENST00000470470 KRTAP19-5Q3LI72 72 aa2.33□□□□□ -2.04
CHD6-206ENST00000470470 USH2AO75445 5202 aa2.31□□□□□ -2.04
CHD6-206ENST00000470470 SSPOA2VEC9 5147 aa2.31□□□□□ -2.04
CHD6-206ENST00000470470 KRTAP19-6Q3LI70 58 aa2.3□□□□□ -2.04
CHD6-206ENST00000470470 KRTAP19-7Q3SYF9 63 aa2.28□□□□□ -2.04
CHD6-206ENST00000470470 LCE3DQ9BYE3 92 aa2.28□□□□□ -2.04
CHD6-206ENST00000470470 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
CHD6-206ENST00000470470 FCGBPQ9Y6R7 5405 aaPredicted RBP2.25□□□□□ -2.05
CHD6-206ENST00000470470 HMCN1Q96RW7 5635 aa2.22□□□□□ -2.05
CHD6-206ENST00000470470 MT1EP04732 61 aa2.22□□□□□ -2.05
CHD6-206ENST00000470470 KRTAP5-7Q6L8G8 165 aa2.21□□□□□ -2.06
CHD6-206ENST00000470470 MT1LQ93083 61 aa2.2□□□□□ -2.06
CHD6-206ENST00000470470 SYNE2Q8WXH0 6885 aaKnown RBP2.16□□□□□ -2.06
CHD6-206ENST00000470470 MACF1Q9UPN3 7388 aaKnown RBP2.14□□□□□ -2.07
CHD6-206ENST00000470470 KRTAP2-3P0C7H8 128 aa2.14□□□□□ -2.07
CHD6-206ENST00000470470 KRTAP2-4Q9BYR9 128 aa2.14□□□□□ -2.07
CHD6-206ENST00000470470 KRTAP2-1Q9BYU5 128 aa2.14□□□□□ -2.07
CHD6-206ENST00000470470 MT1GP13640 62 aa2.12□□□□□ -2.07
CHD6-206ENST00000470470 KRTAP19-3Q7Z4W3 81 aa2.1□□□□□ -2.07
CHD6-206ENST00000470470 MUC12Q9UKN1 5478 aa2.09□□□□□ -2.08
CHD6-206ENST00000470470 NEBP20929 6669 aa2.09□□□□□ -2.08
CHD6-206ENST00000470470 MT1MQ8N339 61 aa2.08□□□□□ -2.08
CHD6-206ENST00000470470 KMT2DO14686 5537 aa2.06□□□□□ -2.08
CHD6-206ENST00000470470 MDN1Q9NU22 5596 aa2.06□□□□□ -2.08
CHD6-206ENST00000470470 KRTAP6-3Q3LI67 103 aa2.01□□□□□ -2.09
CHD6-206ENST00000470470 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
CHD6-206ENST00000470470 SPRR2FQ96RM1 72 aa1.99□□□□□ -2.09
CHD6-206ENST00000470470 KRTAP20-1Q3LI63 56 aa1.91□□□□□ -2.1
CHD6-206ENST00000470470 MT1AP04731 61 aa1.9□□□□□ -2.11
CHD6-206ENST00000470470 SPRR2EP22531 72 aa1.85□□□□□ -2.11
CHD6-206ENST00000470470 SPRR2BP35325 72 aa1.85□□□□□ -2.11
CHD6-206ENST00000470470 SPRR2AP35326 72 aa1.85□□□□□ -2.11
CHD6-206ENST00000470470 KRTAP6-1Q3LI64 71 aa1.85□□□□□ -2.11
CHD6-206ENST00000470470 KRTAP12-4P60329 112 aa1.81□□□□□ -2.12
CHD6-206ENST00000470470 GPR98Q8WXG9 6306 aa1.8□□□□□ -2.12
CHD6-206ENST00000470470 SPRR2DP22532 72 aa1.78□□□□□ -2.12
CHD6-206ENST00000470470 DSTQ03001 7570 aaKnown RBP1.75□□□□□ -2.13
CHD6-206ENST00000470470 SYNE1Q8NF91 8797 aaKnown RBP1.74□□□□□ -2.13
CHD6-206ENST00000470470 AHNAK2Q8IVF2 5795 aa1.68□□□□□ -2.14
CHD6-206ENST00000470470 KRTAP6-2Q3LI66 62 aa1.66□□□□□ -2.14
CHD6-206ENST00000470470 PRM1P04553 51 aa1.57□□□□□ -2.16
CHD6-206ENST00000470470 KRTAP20-2Q3LI61 65 aa1.57□□□□□ -2.16
CHD6-206ENST00000470470 MT4P47944 62 aa1.52□□□□□ -2.17
CHD6-206ENST00000470470 KRTAP5-10Q6L8G5 202 aa1.52□□□□□ -2.17
CHD6-206ENST00000470470 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
CHD6-206ENST00000470470 MUC5BQ9HC84 5762 aaPredicted RBP1.43□□□□□ -2.18
CHD6-206ENST00000470470 MUC5ACP98088 5654 aa1.37□□□□□ -2.19
CHD6-206ENST00000470470 KRTAP21-1Q3LI58 79 aa1.04□□□□□ -2.24
CHD6-206ENST00000470470 PHGR1C9JFL3 82 aa1□□□□□ -2.25
CHD6-206ENST00000470470 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 235.2 ms