RNA–Protein interactions for RNA: ENST00000470305.1

SECISBP2-205, Transcript of SECIS binding protein 2, humanhuman

TSL 1 (best)

Gene SECISBP2, Length 5,405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SECISBP2-205ENST00000470305 UBR4Q5T4S7 5183 aa2.88□□□□□ -1.95
SECISBP2-205ENST00000470305 PRM1P04553 51 aa2.88□□□□□ -1.95
SECISBP2-205ENST00000470305 KRTAP9-7A8MTY7 169 aa2.86□□□□□ -1.95
SECISBP2-205ENST00000470305 KRTAP6-3Q3LI67 103 aa2.85□□□□□ -1.95
SECISBP2-205ENST00000470305 SYNE1Q8NF91 8797 aaKnown RBP2.85□□□□□ -1.95
SECISBP2-205ENST00000470305 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.82□□□□□ -1.96
SECISBP2-205ENST00000470305 KRTAP20-1Q3LI63 56 aa2.73□□□□□ -1.97
SECISBP2-205ENST00000470305 KRTAP19-3Q7Z4W3 81 aa2.71□□□□□ -1.98
SECISBP2-205ENST00000470305 KRTAP4-8A0A0G2JLE6 195 aa2.71□□□□□ -1.98
SECISBP2-205ENST00000470305 KRTAP4-8Q9BYQ9 185 aa2.71□□□□□ -1.98
SECISBP2-205ENST00000470305 LCE1AQ5T7P2 110 aa2.69□□□□□ -1.98
SECISBP2-205ENST00000470305 KRTAP2-3P0C7H8 128 aa2.67□□□□□ -1.98
SECISBP2-205ENST00000470305 KRTAP2-4Q9BYR9 128 aa2.67□□□□□ -1.98
SECISBP2-205ENST00000470305 MT1EP04732 61 aa2.66□□□□□ -1.98
SECISBP2-205ENST00000470305 MT1LQ93083 61 aa2.66□□□□□ -1.98
SECISBP2-205ENST00000470305 KRTAP4-7Q9BYR0 210 aa2.62□□□□□ -1.99
SECISBP2-205ENST00000470305 LOC100996750A0A140TA64 210 aa2.62□□□□□ -1.99
SECISBP2-205ENST00000470305 KRTAP4-6Q9BYQ5 205 aa2.62□□□□□ -1.99
SECISBP2-205ENST00000470305 FSIP2Q5CZC0 6907 aa2.62□□□□□ -1.99
SECISBP2-205ENST00000470305 OBSCNQ5VST9 7968 aa2.6□□□□□ -1.99
SECISBP2-205ENST00000470305 KRTAP2-2Q9BYT5 123 aa2.57□□□□□ -2
SECISBP2-205ENST00000470305 KRTAP2-1Q9BYU5 128 aa2.57□□□□□ -2
SECISBP2-205ENST00000470305 MT1MQ8N339 61 aa2.56□□□□□ -2
SECISBP2-205ENST00000470305 MUC2Q02817 5179 aa2.55□□□□□ -2
SECISBP2-205ENST00000470305 KRTAP5-9P26371 169 aa2.54□□□□□ -2
SECISBP2-205ENST00000470305 USH2AO75445 5202 aa2.52□□□□□ -2.01
SECISBP2-205ENST00000470305 KRTAP19-7Q3SYF9 63 aa2.51□□□□□ -2.01
SECISBP2-205ENST00000470305 SSPOA2VEC9 5147 aa2.5□□□□□ -2.01
SECISBP2-205ENST00000470305 LCE4AQ5TA78 99 aa2.49□□□□□ -2.01
SECISBP2-205ENST00000470305 SYNE2Q8WXH0 6885 aaKnown RBP2.48□□□□□ -2.01
SECISBP2-205ENST00000470305 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
SECISBP2-205ENST00000470305 LCE5AQ5TCM9 118 aa2.45□□□□□ -2.02
SECISBP2-205ENST00000470305 NEBP20929 6669 aa2.43□□□□□ -2.02
SECISBP2-205ENST00000470305 LCE1DQ5T752 114 aa2.43□□□□□ -2.02
SECISBP2-205ENST00000470305 MT4P47944 62 aa2.43□□□□□ -2.02
SECISBP2-205ENST00000470305 KRTAP4-9Q9BYQ8 210 aa2.43□□□□□ -2.02
SECISBP2-205ENST00000470305 KRTAP6-2Q3LI66 62 aa2.41□□□□□ -2.02
SECISBP2-205ENST00000470305 FCGBPQ9Y6R7 5405 aaPredicted RBP2.39□□□□□ -2.03
SECISBP2-205ENST00000470305 MT1AP04731 61 aa2.38□□□□□ -2.03
SECISBP2-205ENST00000470305 KRTAP4-3Q9BYR4 195 aa2.35□□□□□ -2.03
SECISBP2-205ENST00000470305 MACF1Q9UPN3 7388 aaKnown RBP2.34□□□□□ -2.04
SECISBP2-205ENST00000470305 DSTQ03001 7570 aaKnown RBP2.32□□□□□ -2.04
SECISBP2-205ENST00000470305 KRTAP9-6A8MVA2 160 aa2.22□□□□□ -2.05
SECISBP2-205ENST00000470305 KRTAP4-12Q9BQ66 201 aa2.21□□□□□ -2.06
SECISBP2-205ENST00000470305 KRTAP9-4Q9BYQ2 154 aa2.2□□□□□ -2.06
SECISBP2-205ENST00000470305 KMT2DO14686 5537 aa2.19□□□□□ -2.06
SECISBP2-205ENST00000470305 KRTAP6-1Q3LI64 71 aa2.16□□□□□ -2.06
SECISBP2-205ENST00000470305 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
SECISBP2-205ENST00000470305 KRTAP9-9Q9BYP9 154 aa2.12□□□□□ -2.07
SECISBP2-205ENST00000470305 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
SECISBP2-205ENST00000470305 LCE1EQ5T753 118 aa2.11□□□□□ -2.07
SECISBP2-205ENST00000470305 LCE1FQ5T754 118 aa2.11□□□□□ -2.07
SECISBP2-205ENST00000470305 KRTAP5-4Q6L8H1 288 aa2.1□□□□□ -2.07
SECISBP2-205ENST00000470305 MDN1Q9NU22 5596 aa2.08□□□□□ -2.08
SECISBP2-205ENST00000470305 KRTAP20-2Q3LI61 65 aa2.08□□□□□ -2.08
SECISBP2-205ENST00000470305 KRTAP4-11Q9BYQ6 195 aa2.07□□□□□ -2.08
SECISBP2-205ENST00000470305 KRTAP4-2Q9BYR5 136 aa2.05□□□□□ -2.08
SECISBP2-205ENST00000470305 GPR98Q8WXG9 6306 aa1.99□□□□□ -2.09
SECISBP2-205ENST00000470305 KRTAP5-5Q701N2 237 aaPredicted RBP1.96□□□□□ -2.09
SECISBP2-205ENST00000470305 MUC12Q9UKN1 5478 aa1.96□□□□□ -2.1
SECISBP2-205ENST00000470305 KRTAP5-3Q6L8H2 238 aa1.88□□□□□ -2.11
SECISBP2-205ENST00000470305 KRTAP5-2Q701N4 177 aa1.76□□□□□ -2.13
SECISBP2-205ENST00000470305 HMCN1Q96RW7 5635 aa1.73□□□□□ -2.13
SECISBP2-205ENST00000470305 AHNAK2Q8IVF2 5795 aa1.72□□□□□ -2.13
SECISBP2-205ENST00000470305 KRTAP4-4Q9BYR3 166 aa1.69□□□□□ -2.14
SECISBP2-205ENST00000470305 KRTAP5-7Q6L8G8 165 aa1.69□□□□□ -2.14
SECISBP2-205ENST00000470305 KRTAP5-10Q6L8G5 202 aa1.68□□□□□ -2.14
SECISBP2-205ENST00000470305 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.67□□□□□ -2.14
SECISBP2-205ENST00000470305 KRTAP5-8O75690 187 aa1.66□□□□□ -2.14
SECISBP2-205ENST00000470305 MUC5ACP98088 5654 aa1.62□□□□□ -2.15
SECISBP2-205ENST00000470305 AHNAKQ09666 5890 aaKnown RBP1.58□□□□□ -2.16
SECISBP2-205ENST00000470305 KRTAP5-1Q6L8H4 278 aa1.52□□□□□ -2.17
SECISBP2-205ENST00000470305 MUC5BQ9HC84 5762 aaPredicted RBP1.46□□□□□ -2.18
SECISBP2-205ENST00000470305 KRTAP5-11Q6L8G4 156 aa1.43□□□□□ -2.18
SECISBP2-205ENST00000470305 PHGR1C9JFL3 82 aa1.31□□□□□ -2.2
SECISBP2-205ENST00000470305 KRTAP21-2Q3LI59 83 aa1.25□□□□□ -2.21
SECISBP2-205ENST00000470305 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
SECISBP2-205ENST00000470305 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms