RNA–Protein interactions for RNA: ENST00000470180.2

C1orf43-207, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 5

Gene C1orf43, Length 1,861 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-207ENST00000470180 SPRR2FQ96RM1 72 aa5.89□□□□□ -1.47
C1orf43-207ENST00000470180 MUC12Q9UKN1 5478 aa5.88□□□□□ -1.47
C1orf43-207ENST00000470180 SYNE2Q8WXH0 6885 aaKnown RBP5.88□□□□□ -1.47
C1orf43-207ENST00000470180 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.85□□□□□ -1.47
C1orf43-207ENST00000470180 KRTAP19-3Q7Z4W3 81 aa5.84□□□□□ -1.47
C1orf43-207ENST00000470180 MT1GP13640 62 aa5.79□□□□□ -1.48
C1orf43-207ENST00000470180 KRTAP5-9P26371 169 aa5.79□□□□□ -1.48
C1orf43-207ENST00000470180 KRTAP9-6A8MVA2 160 aa5.77□□□□□ -1.49
C1orf43-207ENST00000470180 MT1MQ8N339 61 aa5.76□□□□□ -1.49
C1orf43-207ENST00000470180 LCE5AQ5TCM9 118 aa5.75□□□□□ -1.49
C1orf43-207ENST00000470180 KRTAP4-3Q9BYR4 195 aa5.71□□□□□ -1.5
C1orf43-207ENST00000470180 LOC100996750A0A140TA64 210 aa5.69□□□□□ -1.5
C1orf43-207ENST00000470180 KRTAP4-6Q9BYQ5 205 aa5.69□□□□□ -1.5
C1orf43-207ENST00000470180 LCE1AQ5T7P2 110 aa5.64□□□□□ -1.51
C1orf43-207ENST00000470180 KRTAP9-7A8MTY7 169 aa5.62□□□□□ -1.51
C1orf43-207ENST00000470180 KRTAP6-3Q3LI67 103 aa5.6□□□□□ -1.51
C1orf43-207ENST00000470180 MDN1Q9NU22 5596 aa5.56□□□□□ -1.52
C1orf43-207ENST00000470180 SPRR2EP22531 72 aa5.54□□□□□ -1.52
C1orf43-207ENST00000470180 SPRR2BP35325 72 aa5.54□□□□□ -1.52
C1orf43-207ENST00000470180 SPRR2AP35326 72 aa5.54□□□□□ -1.52
C1orf43-207ENST00000470180 H3BS24 57 aa5.44□□□□□ -1.54
C1orf43-207ENST00000470180 DSTQ03001 7570 aaKnown RBP5.36□□□□□ -1.55
C1orf43-207ENST00000470180 KRTAP2-3P0C7H8 128 aa5.34□□□□□ -1.55
C1orf43-207ENST00000470180 KRTAP2-4Q9BYR9 128 aa5.34□□□□□ -1.55
C1orf43-207ENST00000470180 KRTAP2-1Q9BYU5 128 aa5.34□□□□□ -1.55
C1orf43-207ENST00000470180 SPRR2DP22532 72 aa5.33□□□□□ -1.56
C1orf43-207ENST00000470180 NEBP20929 6669 aa5.27□□□□□ -1.57
C1orf43-207ENST00000470180 A0A0A0MQY5 61 aa5.2□□□□□ -1.58
C1orf43-207ENST00000470180 KRTAP5-5Q701N2 237 aaPredicted RBP5.19□□□□□ -1.58
C1orf43-207ENST00000470180 LCE3BQ5TA77 95 aa5.11□□□□□ -1.59
C1orf43-207ENST00000470180 KRTAP6-1Q3LI64 71 aa5.1□□□□□ -1.59
C1orf43-207ENST00000470180 MT1AP04731 61 aa5.09□□□□□ -1.59
C1orf43-207ENST00000470180 KRTAP4-12Q9BQ66 201 aa4.97□□□□□ -1.61
C1orf43-207ENST00000470180 KRTAP20-1Q3LI63 56 aa4.94□□□□□ -1.62
C1orf43-207ENST00000470180 KRTAP5-4Q6L8H1 288 aa4.88□□□□□ -1.63
C1orf43-207ENST00000470180 KRTAP9-9Q9BYP9 154 aa4.88□□□□□ -1.63
C1orf43-207ENST00000470180 KRTAP9-4Q9BYQ2 154 aa4.88□□□□□ -1.63
C1orf43-207ENST00000470180 INE1O15225 51 aa4.88□□□□□ -1.63
C1orf43-207ENST00000470180 SYNE1Q8NF91 8797 aaKnown RBP4.84□□□□□ -1.64
C1orf43-207ENST00000470180 KRTAP2-2Q9BYT5 123 aa4.81□□□□□ -1.64
C1orf43-207ENST00000470180 KRTAP4-9Q9BYQ8 210 aa4.76□□□□□ -1.65
C1orf43-207ENST00000470180 KRTAP12-4P60329 112 aa4.73□□□□□ -1.65
C1orf43-207ENST00000470180 LCE4AQ5TA78 99 aa4.71□□□□□ -1.66
C1orf43-207ENST00000470180 KRTAP6-2Q3LI66 62 aa4.66□□□□□ -1.66
C1orf43-207ENST00000470180 MT4P47944 62 aa4.65□□□□□ -1.66
C1orf43-207ENST00000470180 LCE1DQ5T752 114 aa4.64□□□□□ -1.67
C1orf43-207ENST00000470180 MT3P25713 68 aa4.6□□□□□ -1.67
C1orf43-207ENST00000470180 KRTAP20-2Q3LI61 65 aa4.56□□□□□ -1.68
C1orf43-207ENST00000470180 LCE3DQ9BYE3 92 aa4.53□□□□□ -1.68
C1orf43-207ENST00000470180 HMCN1Q96RW7 5635 aa4.48□□□□□ -1.69
C1orf43-207ENST00000470180 KRTAP5-2Q701N4 177 aa4.45□□□□□ -1.7
C1orf43-207ENST00000470180 KRTAP4-2Q9BYR5 136 aa4.44□□□□□ -1.7
C1orf43-207ENST00000470180 LCE3EQ5T5B0 92 aa4.41□□□□□ -1.7
C1orf43-207ENST00000470180 KRTAP5-3Q6L8H2 238 aa4.4□□□□□ -1.71
C1orf43-207ENST00000470180 KRTAP4-11Q9BYQ6 195 aa4.35□□□□□ -1.71
C1orf43-207ENST00000470180 OBSCNQ5VST9 7968 aa4.19□□□□□ -1.74
C1orf43-207ENST00000470180 AHNAK2Q8IVF2 5795 aa3.97□□□□□ -1.77
C1orf43-207ENST00000470180 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
C1orf43-207ENST00000470180 PRM1P04553 51 aa3.93□□□□□ -1.78
C1orf43-207ENST00000470180 KRTAP5-10Q6L8G5 202 aa3.86□□□□□ -1.79
C1orf43-207ENST00000470180 KRTAP5-1Q6L8H4 278 aa3.84□□□□□ -1.79
C1orf43-207ENST00000470180 KRTAP5-8O75690 187 aa3.78□□□□□ -1.8
C1orf43-207ENST00000470180 LCE1BQ5T7P3 118 aa3.75□□□□□ -1.81
C1orf43-207ENST00000470180 GPR98Q8WXG9 6306 aa3.74□□□□□ -1.81
C1orf43-207ENST00000470180 MUC5ACP98088 5654 aa3.74□□□□□ -1.81
C1orf43-207ENST00000470180 LCE1CQ5T751 118 aa3.71□□□□□ -1.82
C1orf43-207ENST00000470180 KRTAP5-7Q6L8G8 165 aa3.67□□□□□ -1.82
C1orf43-207ENST00000470180 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.48□□□□□ -1.85
C1orf43-207ENST00000470180 KRTAP21-2Q3LI59 83 aa3.34□□□□□ -1.87
C1orf43-207ENST00000470180 KRTAP5-11Q6L8G4 156 aa3.24□□□□□ -1.89
C1orf43-207ENST00000470180 MUC5BQ9HC84 5762 aaPredicted RBP3.24□□□□□ -1.89
C1orf43-207ENST00000470180 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
C1orf43-207ENST00000470180 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
C1orf43-207ENST00000470180 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
C1orf43-207ENST00000470180 PHGR1C9JFL3 82 aa2.79□□□□□ -1.96
C1orf43-207ENST00000470180 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
C1orf43-207ENST00000470180 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
C1orf43-207ENST00000470180 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 13.5 ms