RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 KRTAP12-4P60329 112 aa2.37□□□□□ -2.03
GAPVD1-215ENST00000470056 FSIP2Q5CZC0 6907 aa2.36□□□□□ -2.03
GAPVD1-215ENST00000470056 FCGBPQ9Y6R7 5405 aaPredicted RBP2.35□□□□□ -2.03
GAPVD1-215ENST00000470056 SPRR2EP22531 72 aa2.34□□□□□ -2.03
GAPVD1-215ENST00000470056 SPRR2BP35325 72 aa2.34□□□□□ -2.03
GAPVD1-215ENST00000470056 SPRR2AP35326 72 aa2.34□□□□□ -2.03
GAPVD1-215ENST00000470056 MT1MQ8N339 61 aa2.32□□□□□ -2.04
GAPVD1-215ENST00000470056 LCE3EQ5T5B0 92 aa2.29□□□□□ -2.04
GAPVD1-215ENST00000470056 SPRR2DP22532 72 aa2.28□□□□□ -2.04
GAPVD1-215ENST00000470056 KRTAP4-7Q9BYR0 210 aa2.28□□□□□ -2.04
GAPVD1-215ENST00000470056 KMT2DO14686 5537 aa2.28□□□□□ -2.04
GAPVD1-215ENST00000470056 LCE3DQ9BYE3 92 aa2.27□□□□□ -2.05
GAPVD1-215ENST00000470056 LCE5AQ5TCM9 118 aa2.26□□□□□ -2.05
GAPVD1-215ENST00000470056 KRTAP5-9P26371 169 aa2.24□□□□□ -2.05
GAPVD1-215ENST00000470056 KRTAP9-6A8MVA2 160 aa2.23□□□□□ -2.05
GAPVD1-215ENST00000470056 LCE1AQ5T7P2 110 aa2.22□□□□□ -2.05
GAPVD1-215ENST00000470056 KRTAP2-3P0C7H8 128 aa2.21□□□□□ -2.06
GAPVD1-215ENST00000470056 KRTAP2-4Q9BYR9 128 aa2.21□□□□□ -2.06
GAPVD1-215ENST00000470056 KRTAP2-1Q9BYU5 128 aa2.21□□□□□ -2.06
GAPVD1-215ENST00000470056 KRTAP6-3Q3LI67 103 aa2.21□□□□□ -2.06
GAPVD1-215ENST00000470056 MACF1Q9UPN3 7388 aaKnown RBP2.2□□□□□ -2.06
GAPVD1-215ENST00000470056 KRTAP9-6A0A140TA67 174 aa2.2□□□□□ -2.06
GAPVD1-215ENST00000470056 LCE3BQ5TA77 95 aa2.19□□□□□ -2.06
GAPVD1-215ENST00000470056 KRTAP4-3Q9BYR4 195 aa2.18□□□□□ -2.06
GAPVD1-215ENST00000470056 SYNE2Q8WXH0 6885 aaKnown RBP2.17□□□□□ -2.06
GAPVD1-215ENST00000470056 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.15□□□□□ -2.06
GAPVD1-215ENST00000470056 LOC100996750A0A140TA64 210 aa2.14□□□□□ -2.07
GAPVD1-215ENST00000470056 MUC12Q9UKN1 5478 aa2.13□□□□□ -2.07
GAPVD1-215ENST00000470056 MT1AP04731 61 aa2.11□□□□□ -2.07
GAPVD1-215ENST00000470056 MDN1Q9NU22 5596 aa2.07□□□□□ -2.08
GAPVD1-215ENST00000470056 NEBP20929 6669 aa2.06□□□□□ -2.08
GAPVD1-215ENST00000470056 PRM1P04553 51 aa2.03□□□□□ -2.08
GAPVD1-215ENST00000470056 KRTAP9-7A8MTY7 169 aa2.03□□□□□ -2.09
GAPVD1-215ENST00000470056 MT4P47944 62 aa2.01□□□□□ -2.09
GAPVD1-215ENST00000470056 KRTAP6-1Q3LI64 71 aa2.01□□□□□ -2.09
GAPVD1-215ENST00000470056 KRTAP5-5Q701N2 237 aaPredicted RBP2□□□□□ -2.09
GAPVD1-215ENST00000470056 KRTAP9-4Q9BYQ2 154 aa1.97□□□□□ -2.09
GAPVD1-215ENST00000470056 KRTAP20-1Q3LI63 56 aa1.96□□□□□ -2.1
GAPVD1-215ENST00000470056 LCE1BQ5T7P3 118 aa1.94□□□□□ -2.1
GAPVD1-215ENST00000470056 SYNE1Q8NF91 8797 aaKnown RBP1.94□□□□□ -2.1
GAPVD1-215ENST00000470056 DSTQ03001 7570 aaKnown RBP1.94□□□□□ -2.1
GAPVD1-215ENST00000470056 LCE4AQ5TA78 99 aa1.94□□□□□ -2.1
GAPVD1-215ENST00000470056 LCE1DQ5T752 114 aa1.9□□□□□ -2.11
GAPVD1-215ENST00000470056 KRTAP2-2Q9BYT5 123 aa1.89□□□□□ -2.11
GAPVD1-215ENST00000470056 KRTAP5-4Q6L8H1 288 aa1.88□□□□□ -2.11
GAPVD1-215ENST00000470056 KRTAP6-2Q3LI66 62 aa1.86□□□□□ -2.11
GAPVD1-215ENST00000470056 KRTAP4-9Q9BYQ8 210 aa1.85□□□□□ -2.11
GAPVD1-215ENST00000470056 LCE1CQ5T751 118 aa1.83□□□□□ -2.12
GAPVD1-215ENST00000470056 LCE1EQ5T753 118 aa1.83□□□□□ -2.12
GAPVD1-215ENST00000470056 LCE1FQ5T754 118 aa1.83□□□□□ -2.12
GAPVD1-215ENST00000470056 KRTAP20-2Q3LI61 65 aa1.78□□□□□ -2.12
GAPVD1-215ENST00000470056 KRTAP4-6Q9BYQ5 205 aa1.75□□□□□ -2.13
GAPVD1-215ENST00000470056 KRTAP5-2Q701N4 177 aa1.71□□□□□ -2.14
GAPVD1-215ENST00000470056 HMCN1Q96RW7 5635 aa1.7□□□□□ -2.14
GAPVD1-215ENST00000470056 OBSCNQ5VST9 7968 aa1.67□□□□□ -2.14
GAPVD1-215ENST00000470056 KRTAP5-3Q6L8H2 238 aa1.66□□□□□ -2.14
GAPVD1-215ENST00000470056 KRTAP9-9Q9BYP9 154 aa1.66□□□□□ -2.14
GAPVD1-215ENST00000470056 GPR98Q8WXG9 6306 aa1.64□□□□□ -2.15
GAPVD1-215ENST00000470056 KRTAP4-11Q9BYQ6 195 aa1.53□□□□□ -2.16
GAPVD1-215ENST00000470056 AHNAK2Q8IVF2 5795 aa1.52□□□□□ -2.17
GAPVD1-215ENST00000470056 MUC5ACP98088 5654 aa1.48□□□□□ -2.17
GAPVD1-215ENST00000470056 KRTAP5-10Q6L8G5 202 aa1.46□□□□□ -2.18
GAPVD1-215ENST00000470056 KRTAP5-8O75690 187 aa1.45□□□□□ -2.18
GAPVD1-215ENST00000470056 KRTAP5-1Q6L8H4 278 aa1.44□□□□□ -2.18
GAPVD1-215ENST00000470056 KRTAP4-2Q9BYR5 136 aa1.43□□□□□ -2.18
GAPVD1-215ENST00000470056 KRTAP5-7Q6L8G8 165 aa1.41□□□□□ -2.18
GAPVD1-215ENST00000470056 AHNAKQ09666 5890 aaKnown RBP1.4□□□□□ -2.18
GAPVD1-215ENST00000470056 MUC19Q7Z5P9 8384 aa1.39□□□□□ -2.19
GAPVD1-215ENST00000470056 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.39□□□□□ -2.19
GAPVD1-215ENST00000470056 MUC5BQ9HC84 5762 aaPredicted RBP1.32□□□□□ -2.2
GAPVD1-215ENST00000470056 KRTAP5-11Q6L8G4 156 aa1.31□□□□□ -2.2
GAPVD1-215ENST00000470056 KRTAP21-2Q3LI59 83 aa1.29□□□□□ -2.2
GAPVD1-215ENST00000470056 KRTAP4-12Q9BQ66 201 aa1.28□□□□□ -2.2
GAPVD1-215ENST00000470056 KRTAP4-4Q9BYR3 166 aa1.23□□□□□ -2.21
GAPVD1-215ENST00000470056 PHGR1C9JFL3 82 aa1.13□□□□□ -2.23
GAPVD1-215ENST00000470056 KRTAP21-1Q3LI58 79 aa1.03□□□□□ -2.24
GAPVD1-215ENST00000470056 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 83.8 ms