RNA–Protein interactions for RNA: ENST00000469147.5

TRAPPC12-215, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 1,002 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-215ENST00000469147 KRTAP9-4Q9BYQ2 154 aa3.92□□□□□ -1.78
TRAPPC12-215ENST00000469147 KRTAP12-1P59990 96 aa3.9□□□□□ -1.79
TRAPPC12-215ENST00000469147 KRTAP25-1Q3LHN0 102 aa3.9□□□□□ -1.79
TRAPPC12-215ENST00000469147 SPINT4Q6UDR6 99 aa3.9□□□□□ -1.79
TRAPPC12-215ENST00000469147 KRTAP8-1Q8IUC2 63 aa3.9□□□□□ -1.79
TRAPPC12-215ENST00000469147 KRTAP19-4Q3LI73 84 aa3.88□□□□□ -1.79
TRAPPC12-215ENST00000469147 KRTAP4-8A0A0G2JLE6 195 aa3.86□□□□□ -1.79
TRAPPC12-215ENST00000469147 NDUFAF8A1L188 74 aa3.85□□□□□ -1.79
TRAPPC12-215ENST00000469147 KRTAP2-2Q9BYT5 123 aa3.85□□□□□ -1.79
TRAPPC12-215ENST00000469147 KRTAP2-1Q9BYU5 128 aa3.85□□□□□ -1.79
TRAPPC12-215ENST00000469147 KRTAP10-12P60413 245 aa3.84□□□□□ -1.79
TRAPPC12-215ENST00000469147 KRTAP10-7P60409 375 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC12-215ENST00000469147 SPRR2DP22532 72 aa3.82□□□□□ -1.8
TRAPPC12-215ENST00000469147 LCE1AQ5T7P2 110 aa3.77□□□□□ -1.81
TRAPPC12-215ENST00000469147 LCE4AQ5TA78 99 aa3.77□□□□□ -1.81
TRAPPC12-215ENST00000469147 LCE1DQ5T752 114 aa3.72□□□□□ -1.81
TRAPPC12-215ENST00000469147 C10orf95Q9H7T3 257 aa3.7□□□□□ -1.82
TRAPPC12-215ENST00000469147 TNP1P09430 55 aa3.69□□□□□ -1.82
TRAPPC12-215ENST00000469147 KRTAP15-1Q3LI76 137 aa3.69□□□□□ -1.82
TRAPPC12-215ENST00000469147 KRTAP4-7Q9BYR0 210 aa3.66□□□□□ -1.82
TRAPPC12-215ENST00000469147 KRTAP4-9Q9BYQ8 210 aa3.6□□□□□ -1.83
TRAPPC12-215ENST00000469147 KRTAP19-7Q3SYF9 63 aa3.59□□□□□ -1.83
TRAPPC12-215ENST00000469147 GPR98Q8WXG9 6306 aa3.57□□□□□ -1.84
TRAPPC12-215ENST00000469147 MT1EP04732 61 aa3.56□□□□□ -1.84
TRAPPC12-215ENST00000469147 LCE3AQ5TA76 89 aa3.56□□□□□ -1.84
TRAPPC12-215ENST00000469147 KRTAP19-5Q3LI72 72 aa3.54□□□□□ -1.84
TRAPPC12-215ENST00000469147 KRTAP4-2Q9BYR5 136 aa3.52□□□□□ -1.85
TRAPPC12-215ENST00000469147 LCE5AQ5TCM9 118 aa3.5□□□□□ -1.85
TRAPPC12-215ENST00000469147 KRTAP19-3Q7Z4W3 81 aa3.5□□□□□ -1.85
TRAPPC12-215ENST00000469147 KRTAP4-11Q9BYQ6 195 aa3.5□□□□□ -1.85
TRAPPC12-215ENST00000469147 DSTQ03001 7570 aaKnown RBP3.49□□□□□ -1.85
TRAPPC12-215ENST00000469147 MT1GP13640 62 aa3.45□□□□□ -1.86
TRAPPC12-215ENST00000469147 KRTAP12-3P60328 96 aa3.45□□□□□ -1.86
TRAPPC12-215ENST00000469147 PP632Q6XCG6 107 aa3.44□□□□□ -1.86
TRAPPC12-215ENST00000469147 MT1LQ93083 61 aa3.43□□□□□ -1.86
TRAPPC12-215ENST00000469147 INE1O15225 51 aa3.39□□□□□ -1.87
TRAPPC12-215ENST00000469147 MT4P47944 62 aa3.37□□□□□ -1.87
TRAPPC12-215ENST00000469147 MT1MQ8N339 61 aa3.37□□□□□ -1.87
TRAPPC12-215ENST00000469147 KRTAP4-3Q9BYR4 195 aa3.37□□□□□ -1.87
TRAPPC12-215ENST00000469147 HMCN1Q96RW7 5635 aa3.26□□□□□ -1.89
TRAPPC12-215ENST00000469147 AHNAK2Q8IVF2 5795 aa3.2□□□□□ -1.9
TRAPPC12-215ENST00000469147 LCE3CQ5T5A8 94 aa3.19□□□□□ -1.9
TRAPPC12-215ENST00000469147 KRTAP5-4Q6L8H1 288 aa3.17□□□□□ -1.9
TRAPPC12-215ENST00000469147 KRTAP5-10Q6L8G5 202 aa3.14□□□□□ -1.91
TRAPPC12-215ENST00000469147 SPRR5A0A1B0GTR4 108 aa3.11□□□□□ -1.91
TRAPPC12-215ENST00000469147 KRTAP5-3Q6L8H2 238 aa3.08□□□□□ -1.92
TRAPPC12-215ENST00000469147 KRTAP5-5Q701N2 237 aaPredicted RBP3.08□□□□□ -1.92
TRAPPC12-215ENST00000469147 KRTAP12-4P60329 112 aa3.07□□□□□ -1.92
TRAPPC12-215ENST00000469147 KRTAP5-7Q6L8G8 165 aa3.07□□□□□ -1.92
TRAPPC12-215ENST00000469147 KRTAP20-2Q3LI61 65 aa3.02□□□□□ -1.93
TRAPPC12-215ENST00000469147 MT3P25713 68 aa3□□□□□ -1.93
TRAPPC12-215ENST00000469147 KRTAP9-6A8MVA2 160 aa2.98□□□□□ -1.93
TRAPPC12-215ENST00000469147 SYNE1Q8NF91 8797 aaKnown RBP2.98□□□□□ -1.93
TRAPPC12-215ENST00000469147 MT1AP04731 61 aa2.94□□□□□ -1.94
TRAPPC12-215ENST00000469147 KRTAP6-1Q3LI64 71 aa2.88□□□□□ -1.95
TRAPPC12-215ENST00000469147 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
TRAPPC12-215ENST00000469147 AHNAKQ09666 5890 aaKnown RBP2.77□□□□□ -1.97
TRAPPC12-215ENST00000469147 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
TRAPPC12-215ENST00000469147 KRTAP6-2Q3LI66 62 aa2.71□□□□□ -1.98
TRAPPC12-215ENST00000469147 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
TRAPPC12-215ENST00000469147 MUC5BQ9HC84 5762 aaPredicted RBP2.69□□□□□ -1.98
TRAPPC12-215ENST00000469147 MUC5ACP98088 5654 aa2.68□□□□□ -1.98
TRAPPC12-215ENST00000469147 OBSCNQ5VST9 7968 aa2.63□□□□□ -1.99
TRAPPC12-215ENST00000469147 KRTAP5-1Q6L8H4 278 aa2.52□□□□□ -2.01
TRAPPC12-215ENST00000469147 LCE1EQ5T753 118 aa2.44□□□□□ -2.02
TRAPPC12-215ENST00000469147 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
TRAPPC12-215ENST00000469147 LCE3DQ9BYE3 92 aa2.35□□□□□ -2.03
TRAPPC12-215ENST00000469147 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
TRAPPC12-215ENST00000469147 LCE3EQ5T5B0 92 aa2.32□□□□□ -2.04
TRAPPC12-215ENST00000469147 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.31□□□□□ -2.04
TRAPPC12-215ENST00000469147 LCE1CQ5T751 118 aa2.25□□□□□ -2.05
TRAPPC12-215ENST00000469147 KRTAP4-4Q9BYR3 166 aa1.94□□□□□ -2.1
TRAPPC12-215ENST00000469147 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
TRAPPC12-215ENST00000469147 KRTAP21-2Q3LI59 83 aa1.9□□□□□ -2.11
TRAPPC12-215ENST00000469147 PRM1P04553 51 aa1.89□□□□□ -2.11
TRAPPC12-215ENST00000469147 MUC19Q7Z5P9 8384 aa1.63□□□□□ -2.15
TRAPPC12-215ENST00000469147 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
TRAPPC12-215ENST00000469147 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 115.6 ms