RNA–Protein interactions for RNA: ENST00000468892.5

ABCF3-207, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 1,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-207ENST00000468892 MDN1Q9NU22 5596 aa6.76□□□□□ -1.33
ABCF3-207ENST00000468892 KMT2DO14686 5537 aa6.74□□□□□ -1.33
ABCF3-207ENST00000468892 SPRR2FQ96RM1 72 aa6.67□□□□□ -1.34
ABCF3-207ENST00000468892 MT1LQ93083 61 aa6.66□□□□□ -1.34
ABCF3-207ENST00000468892 KRTAP2-3P0C7H8 128 aa6.62□□□□□ -1.35
ABCF3-207ENST00000468892 LCE3CQ5T5A8 94 aa6.62□□□□□ -1.35
ABCF3-207ENST00000468892 KRTAP2-4Q9BYR9 128 aa6.62□□□□□ -1.35
ABCF3-207ENST00000468892 SPRR5A0A1B0GTR4 108 aa6.61□□□□□ -1.35
ABCF3-207ENST00000468892 KRTAP5-9P26371 169 aa6.59□□□□□ -1.35
ABCF3-207ENST00000468892 LUZP6Q538Z0 58 aa6.56□□□□□ -1.36
ABCF3-207ENST00000468892 KRTAP19-3Q7Z4W3 81 aa6.55□□□□□ -1.36
ABCF3-207ENST00000468892 MT1GP13640 62 aa6.53□□□□□ -1.36
ABCF3-207ENST00000468892 LCE5AQ5TCM9 118 aa6.41□□□□□ -1.38
ABCF3-207ENST00000468892 MT1MQ8N339 61 aa6.39□□□□□ -1.39
ABCF3-207ENST00000468892 KRTAP2-2Q9BYT5 123 aa6.37□□□□□ -1.39
ABCF3-207ENST00000468892 KRTAP2-1Q9BYU5 128 aa6.37□□□□□ -1.39
ABCF3-207ENST00000468892 LCE1AQ5T7P2 110 aa6.35□□□□□ -1.39
ABCF3-207ENST00000468892 SPRR2EP22531 72 aa6.34□□□□□ -1.39
ABCF3-207ENST00000468892 SPRR2BP35325 72 aa6.34□□□□□ -1.39
ABCF3-207ENST00000468892 SPRR2AP35326 72 aa6.34□□□□□ -1.39
ABCF3-207ENST00000468892 KRTAP4-7Q9BYR0 210 aa6.34□□□□□ -1.39
ABCF3-207ENST00000468892 GPR98Q8WXG9 6306 aa6.28□□□□□ -1.4
ABCF3-207ENST00000468892 NDUFAF8A1L188 74 aa6.26□□□□□ -1.41
ABCF3-207ENST00000468892 KRTAP4-3Q9BYR4 195 aa6.17□□□□□ -1.42
ABCF3-207ENST00000468892 KRTAP9-6A8MVA2 160 aa6.13□□□□□ -1.43
ABCF3-207ENST00000468892 SPRR2DP22532 72 aa6.13□□□□□ -1.43
ABCF3-207ENST00000468892 LOC100996750A0A140TA64 210 aa5.96□□□□□ -1.45
ABCF3-207ENST00000468892 LCE3BQ5TA77 95 aa5.94□□□□□ -1.46
ABCF3-207ENST00000468892 DSTQ03001 7570 aaKnown RBP5.85□□□□□ -1.47
ABCF3-207ENST00000468892 KRTAP5-5Q701N2 237 aaPredicted RBP5.74□□□□□ -1.49
ABCF3-207ENST00000468892 KRTAP4-9Q9BYQ8 210 aa5.72□□□□□ -1.49
ABCF3-207ENST00000468892 MT1AP04731 61 aa5.68□□□□□ -1.5
ABCF3-207ENST00000468892 HMCN1Q96RW7 5635 aa5.64□□□□□ -1.51
ABCF3-207ENST00000468892 A0A0A0MQY5 61 aa5.64□□□□□ -1.51
ABCF3-207ENST00000468892 AHNAK2Q8IVF2 5795 aa5.62□□□□□ -1.51
ABCF3-207ENST00000468892 KRTAP6-1Q3LI64 71 aa5.57□□□□□ -1.52
ABCF3-207ENST00000468892 LCE1DQ5T752 114 aa5.51□□□□□ -1.53
ABCF3-207ENST00000468892 KRTAP5-4Q6L8H1 288 aa5.5□□□□□ -1.53
ABCF3-207ENST00000468892 LCE4AQ5TA78 99 aa5.48□□□□□ -1.53
ABCF3-207ENST00000468892 H3BS24 57 aa5.47□□□□□ -1.53
ABCF3-207ENST00000468892 KRTAP5-10Q6L8G5 202 aa5.47□□□□□ -1.53
ABCF3-207ENST00000468892 KRTAP12-4P60329 112 aa5.45□□□□□ -1.54
ABCF3-207ENST00000468892 KRTAP9-4Q9BYQ2 154 aa5.41□□□□□ -1.54
ABCF3-207ENST00000468892 KRTAP5-7Q6L8G8 165 aa5.35□□□□□ -1.55
ABCF3-207ENST00000468892 MT4P47944 62 aa5.33□□□□□ -1.56
ABCF3-207ENST00000468892 KRTAP4-6Q9BYQ5 205 aa5.29□□□□□ -1.56
ABCF3-207ENST00000468892 INE1O15225 51 aa5.28□□□□□ -1.56
ABCF3-207ENST00000468892 SYNE1Q8NF91 8797 aaKnown RBP5.23□□□□□ -1.57
ABCF3-207ENST00000468892 MT3P25713 68 aa5.19□□□□□ -1.58
ABCF3-207ENST00000468892 KRTAP5-3Q6L8H2 238 aa5.18□□□□□ -1.58
ABCF3-207ENST00000468892 KRTAP6-2Q3LI66 62 aa5.16□□□□□ -1.58
ABCF3-207ENST00000468892 KRTAP20-2Q3LI61 65 aa5.14□□□□□ -1.59
ABCF3-207ENST00000468892 KRTAP5-2Q701N4 177 aa4.99□□□□□ -1.61
ABCF3-207ENST00000468892 LCE3DQ9BYE3 92 aa4.99□□□□□ -1.61
ABCF3-207ENST00000468892 LCE3EQ5T5B0 92 aa4.86□□□□□ -1.63
ABCF3-207ENST00000468892 AHNAKQ09666 5890 aaKnown RBP4.85□□□□□ -1.63
ABCF3-207ENST00000468892 MUC5BQ9HC84 5762 aaPredicted RBP4.72□□□□□ -1.65
ABCF3-207ENST00000468892 MUC5ACP98088 5654 aa4.72□□□□□ -1.65
ABCF3-207ENST00000468892 KRTAP4-11Q9BYQ6 195 aa4.63□□□□□ -1.67
ABCF3-207ENST00000468892 LCE1EQ5T753 118 aa4.52□□□□□ -1.69
ABCF3-207ENST00000468892 KRTAP5-8O75690 187 aa4.51□□□□□ -1.69
ABCF3-207ENST00000468892 OBSCNQ5VST9 7968 aa4.46□□□□□ -1.7
ABCF3-207ENST00000468892 KRTAP9-9Q9BYP9 154 aa4.36□□□□□ -1.71
ABCF3-207ENST00000468892 KRTAP4-12Q9BQ66 201 aa4.29□□□□□ -1.72
ABCF3-207ENST00000468892 KRTAP5-1Q6L8H4 278 aa4.28□□□□□ -1.72
ABCF3-207ENST00000468892 PRM1P04553 51 aa4.19□□□□□ -1.74
ABCF3-207ENST00000468892 LCE1BQ5T7P3 118 aa4.19□□□□□ -1.74
ABCF3-207ENST00000468892 LCE1CQ5T751 118 aa4.18□□□□□ -1.74
ABCF3-207ENST00000468892 KRTAP4-2Q9BYR5 136 aa4.12□□□□□ -1.75
ABCF3-207ENST00000468892 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.91□□□□□ -1.78
ABCF3-207ENST00000468892 KRTAP5-11Q6L8G4 156 aa3.69□□□□□ -1.82
ABCF3-207ENST00000468892 KRTAP21-2Q3LI59 83 aa3.64□□□□□ -1.83
ABCF3-207ENST00000468892 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
ABCF3-207ENST00000468892 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
ABCF3-207ENST00000468892 PHGR1C9JFL3 82 aa3.18□□□□□ -1.9
ABCF3-207ENST00000468892 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
ABCF3-207ENST00000468892 KRTAP21-1Q3LI58 79 aa2.57□□□□□ -2
ABCF3-207ENST00000468892 MUC16Q8WXI7 14507 aa2.03□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 67.9 ms