RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 MT1EP04732 61 aa7.63□□□□□ -1.19
PPP1R3F-203ENST00000466508 SPRR2FQ96RM1 72 aa7.54□□□□□ -1.2
PPP1R3F-203ENST00000466508 MDN1Q9NU22 5596 aa7.52□□□□□ -1.21
PPP1R3F-203ENST00000466508 MT1LQ93083 61 aa7.5□□□□□ -1.21
PPP1R3F-203ENST00000466508 LCE3CQ5T5A8 94 aa7.49□□□□□ -1.21
PPP1R3F-203ENST00000466508 LUZP6Q538Z0 58 aa7.48□□□□□ -1.21
PPP1R3F-203ENST00000466508 KRTAP19-4Q3LI73 84 aa7.45□□□□□ -1.22
PPP1R3F-203ENST00000466508 NDUFAF8A1L188 74 aa7.43□□□□□ -1.22
PPP1R3F-203ENST00000466508 SPRR2EP22531 72 aa7.38□□□□□ -1.23
PPP1R3F-203ENST00000466508 SPRR2BP35325 72 aa7.38□□□□□ -1.23
PPP1R3F-203ENST00000466508 SPRR2AP35326 72 aa7.38□□□□□ -1.23
PPP1R3F-203ENST00000466508 KRTAP20-1Q3LI63 56 aa7.36□□□□□ -1.23
PPP1R3F-203ENST00000466508 KRTAP19-3Q7Z4W3 81 aa7.3□□□□□ -1.24
PPP1R3F-203ENST00000466508 LCE1AQ5T7P2 110 aa7.3□□□□□ -1.24
PPP1R3F-203ENST00000466508 KRTAP4-7Q9BYR0 210 aa7.29□□□□□ -1.24
PPP1R3F-203ENST00000466508 MT1GP13640 62 aa7.24□□□□□ -1.25
PPP1R3F-203ENST00000466508 KRTAP2-3P0C7H8 128 aa7.22□□□□□ -1.25
PPP1R3F-203ENST00000466508 KRTAP2-4Q9BYR9 128 aa7.22□□□□□ -1.25
PPP1R3F-203ENST00000466508 MT1MQ8N339 61 aa7.17□□□□□ -1.26
PPP1R3F-203ENST00000466508 LCE5AQ5TCM9 118 aa7.17□□□□□ -1.26
PPP1R3F-203ENST00000466508 SPRR2DP22532 72 aa7.15□□□□□ -1.27
PPP1R3F-203ENST00000466508 KRTAP9-6A8MVA2 160 aa7.11□□□□□ -1.27
PPP1R3F-203ENST00000466508 A0A0A0MQY5 61 aa7.1□□□□□ -1.27
PPP1R3F-203ENST00000466508 KRTAP4-3Q9BYR4 195 aa7.05□□□□□ -1.28
PPP1R3F-203ENST00000466508 KRTAP2-2Q9BYT5 123 aa7□□□□□ -1.29
PPP1R3F-203ENST00000466508 KRTAP2-1Q9BYU5 128 aa7□□□□□ -1.29
PPP1R3F-203ENST00000466508 LCE3BQ5TA77 95 aa6.94□□□□□ -1.3
PPP1R3F-203ENST00000466508 DSTQ03001 7570 aaKnown RBP6.85□□□□□ -1.31
PPP1R3F-203ENST00000466508 LOC100996750A0A140TA64 210 aa6.85□□□□□ -1.31
PPP1R3F-203ENST00000466508 KRTAP5-5Q701N2 237 aaPredicted RBP6.46□□□□□ -1.38
PPP1R3F-203ENST00000466508 KRTAP4-9Q9BYQ8 210 aa6.41□□□□□ -1.38
PPP1R3F-203ENST00000466508 MT1AP04731 61 aa6.36□□□□□ -1.39
PPP1R3F-203ENST00000466508 LCE4AQ5TA78 99 aa6.32□□□□□ -1.4
PPP1R3F-203ENST00000466508 KRTAP6-1Q3LI64 71 aa6.32□□□□□ -1.4
PPP1R3F-203ENST00000466508 LCE1DQ5T752 114 aa6.28□□□□□ -1.4
PPP1R3F-203ENST00000466508 INE1O15225 51 aa6.26□□□□□ -1.41
PPP1R3F-203ENST00000466508 MT4P47944 62 aa6.24□□□□□ -1.41
PPP1R3F-203ENST00000466508 KRTAP5-4Q6L8H1 288 aa6.22□□□□□ -1.41
PPP1R3F-203ENST00000466508 HMCN1Q96RW7 5635 aa6.17□□□□□ -1.42
PPP1R3F-203ENST00000466508 SYNE1Q8NF91 8797 aaKnown RBP6.15□□□□□ -1.43
PPP1R3F-203ENST00000466508 KRTAP4-6Q9BYQ5 205 aa6.07□□□□□ -1.44
PPP1R3F-203ENST00000466508 GPR98Q8WXG9 6306 aa6.05□□□□□ -1.44
PPP1R3F-203ENST00000466508 KRTAP9-4Q9BYQ2 154 aa6.02□□□□□ -1.44
PPP1R3F-203ENST00000466508 KRTAP12-4P60329 112 aa5.95□□□□□ -1.46
PPP1R3F-203ENST00000466508 KRTAP20-2Q3LI61 65 aa5.86□□□□□ -1.47
PPP1R3F-203ENST00000466508 AHNAK2Q8IVF2 5795 aa5.85□□□□□ -1.47
PPP1R3F-203ENST00000466508 KRTAP6-2Q3LI66 62 aa5.79□□□□□ -1.48
PPP1R3F-203ENST00000466508 MT3P25713 68 aa5.75□□□□□ -1.49
PPP1R3F-203ENST00000466508 KRTAP5-10Q6L8G5 202 aa5.74□□□□□ -1.49
PPP1R3F-203ENST00000466508 KRTAP5-3Q6L8H2 238 aa5.67□□□□□ -1.5
PPP1R3F-203ENST00000466508 LCE3DQ9BYE3 92 aa5.65□□□□□ -1.5
PPP1R3F-203ENST00000466508 KRTAP5-2Q701N4 177 aa5.56□□□□□ -1.52
PPP1R3F-203ENST00000466508 LCE3EQ5T5B0 92 aa5.51□□□□□ -1.53
PPP1R3F-203ENST00000466508 KRTAP5-7Q6L8G8 165 aa5.49□□□□□ -1.53
PPP1R3F-203ENST00000466508 OBSCNQ5VST9 7968 aa5.37□□□□□ -1.55
PPP1R3F-203ENST00000466508 KRTAP4-11Q9BYQ6 195 aa5.32□□□□□ -1.56
PPP1R3F-203ENST00000466508 KRTAP5-8O75690 187 aa5.13□□□□□ -1.59
PPP1R3F-203ENST00000466508 LCE1EQ5T753 118 aa4.96□□□□□ -1.61
PPP1R3F-203ENST00000466508 PRM1P04553 51 aa4.88□□□□□ -1.63
PPP1R3F-203ENST00000466508 KRTAP5-1Q6L8H4 278 aa4.88□□□□□ -1.63
PPP1R3F-203ENST00000466508 KRTAP9-9Q9BYP9 154 aa4.86□□□□□ -1.63
PPP1R3F-203ENST00000466508 MUC5BQ9HC84 5762 aaPredicted RBP4.82□□□□□ -1.64
PPP1R3F-203ENST00000466508 MUC5ACP98088 5654 aa4.77□□□□□ -1.65
PPP1R3F-203ENST00000466508 AHNAKQ09666 5890 aaKnown RBP4.75□□□□□ -1.65
PPP1R3F-203ENST00000466508 LCE1BQ5T7P3 118 aa4.66□□□□□ -1.66
PPP1R3F-203ENST00000466508 LCE1CQ5T751 118 aa4.64□□□□□ -1.67
PPP1R3F-203ENST00000466508 KRTAP4-2Q9BYR5 136 aa4.64□□□□□ -1.67
PPP1R3F-203ENST00000466508 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.35□□□□□ -1.71
PPP1R3F-203ENST00000466508 KRTAP21-2Q3LI59 83 aa4.14□□□□□ -1.75
PPP1R3F-203ENST00000466508 KRTAP5-11Q6L8G4 156 aa4.08□□□□□ -1.76
PPP1R3F-203ENST00000466508 KRTAP4-12Q9BQ66 201 aa3.99□□□□□ -1.77
PPP1R3F-203ENST00000466508 LCE1FQ5T754 118 aa3.83□□□□□ -1.8
PPP1R3F-203ENST00000466508 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
PPP1R3F-203ENST00000466508 PHGR1C9JFL3 82 aa3.5□□□□□ -1.85
PPP1R3F-203ENST00000466508 MUC19Q7Z5P9 8384 aa3.2□□□□□ -1.9
PPP1R3F-203ENST00000466508 KRTAP21-1Q3LI58 79 aa3□□□□□ -1.93
PPP1R3F-203ENST00000466508 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 180.8 ms