RNA–Protein interactions for RNA: ENST00000465887.2

POLR1D-204, Transcript of RNA polymerase I and III subunit D, humanhuman

TSL 2

Gene POLR1D, Length 2,118 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1D-204ENST00000465887 LCE3AQ5TA76 89 aa6.08□□□□□ -1.44
POLR1D-204ENST00000465887 KRTAP8-1Q8IUC2 63 aa5.99□□□□□ -1.45
POLR1D-204ENST00000465887 KRTAP4-7Q9BYR0 210 aa5.96□□□□□ -1.45
POLR1D-204ENST00000465887 SYNE2Q8WXH0 6885 aaKnown RBP5.95□□□□□ -1.46
POLR1D-204ENST00000465887 KRTAP19-4Q3LI73 84 aa5.95□□□□□ -1.46
POLR1D-204ENST00000465887 KRTAP19-5Q3LI72 72 aa5.9□□□□□ -1.46
POLR1D-204ENST00000465887 KRTAP19-7Q3SYF9 63 aa5.9□□□□□ -1.47
POLR1D-204ENST00000465887 LCE1DQ5T752 114 aa5.85□□□□□ -1.47
POLR1D-204ENST00000465887 KRTAP5-9P26371 169 aa5.83□□□□□ -1.48
POLR1D-204ENST00000465887 SPRR2FQ96RM1 72 aa5.83□□□□□ -1.48
POLR1D-204ENST00000465887 KRTAP12-3P60328 96 aa5.82□□□□□ -1.48
POLR1D-204ENST00000465887 KRTAP6-3Q3LI67 103 aa5.81□□□□□ -1.48
POLR1D-204ENST00000465887 MT1EP04732 61 aa5.8□□□□□ -1.48
POLR1D-204ENST00000465887 KRTAP9-7A8MTY7 169 aa5.77□□□□□ -1.49
POLR1D-204ENST00000465887 LCE4AQ5TA78 99 aa5.77□□□□□ -1.49
POLR1D-204ENST00000465887 MUC12Q9UKN1 5478 aa5.74□□□□□ -1.49
POLR1D-204ENST00000465887 KRTAP4-9Q9BYQ8 210 aa5.73□□□□□ -1.49
POLR1D-204ENST00000465887 KRTAP4-2Q9BYR5 136 aa5.68□□□□□ -1.5
POLR1D-204ENST00000465887 MT1LQ93083 61 aa5.64□□□□□ -1.51
POLR1D-204ENST00000465887 LCE1AQ5T7P2 110 aa5.62□□□□□ -1.51
POLR1D-204ENST00000465887 KRTAP19-3Q7Z4W3 81 aa5.6□□□□□ -1.51
POLR1D-204ENST00000465887 SPRR2EP22531 72 aa5.59□□□□□ -1.52
POLR1D-204ENST00000465887 SPRR2BP35325 72 aa5.59□□□□□ -1.52
POLR1D-204ENST00000465887 SPRR2AP35326 72 aa5.59□□□□□ -1.52
POLR1D-204ENST00000465887 MDN1Q9NU22 5596 aa5.56□□□□□ -1.52
POLR1D-204ENST00000465887 LCE5AQ5TCM9 118 aa5.54□□□□□ -1.52
POLR1D-204ENST00000465887 MT1GP13640 62 aa5.51□□□□□ -1.53
POLR1D-204ENST00000465887 MT1MQ8N339 61 aa5.47□□□□□ -1.53
POLR1D-204ENST00000465887 NEBP20929 6669 aa5.45□□□□□ -1.54
POLR1D-204ENST00000465887 KRTAP4-11Q9BYQ6 195 aa5.44□□□□□ -1.54
POLR1D-204ENST00000465887 LCE3CQ5T5A8 94 aa5.42□□□□□ -1.54
POLR1D-204ENST00000465887 KRTAP5-3Q6L8H2 238 aa5.39□□□□□ -1.55
POLR1D-204ENST00000465887 KRTAP4-3Q9BYR4 195 aa5.39□□□□□ -1.55
POLR1D-204ENST00000465887 SPRR2DP22532 72 aa5.38□□□□□ -1.55
POLR1D-204ENST00000465887 DSTQ03001 7570 aaKnown RBP5.24□□□□□ -1.57
POLR1D-204ENST00000465887 KRTAP2-3P0C7H8 128 aa5.18□□□□□ -1.58
POLR1D-204ENST00000465887 KRTAP2-4Q9BYR9 128 aa5.18□□□□□ -1.58
POLR1D-204ENST00000465887 KRTAP2-1Q9BYU5 128 aa5.18□□□□□ -1.58
POLR1D-204ENST00000465887 KRTAP9-6A8MVA2 160 aa5.18□□□□□ -1.58
POLR1D-204ENST00000465887 KRTAP20-1Q3LI63 56 aa5.1□□□□□ -1.59
POLR1D-204ENST00000465887 KRTAP2-2Q9BYT5 123 aa4.99□□□□□ -1.61
POLR1D-204ENST00000465887 KRTAP5-5Q701N2 237 aaPredicted RBP4.97□□□□□ -1.61
POLR1D-204ENST00000465887 KRTAP5-4Q6L8H1 288 aa4.83□□□□□ -1.64
POLR1D-204ENST00000465887 MT1AP04731 61 aa4.79□□□□□ -1.64
POLR1D-204ENST00000465887 KRTAP6-1Q3LI64 71 aa4.77□□□□□ -1.65
POLR1D-204ENST00000465887 MT4P47944 62 aa4.7□□□□□ -1.66
POLR1D-204ENST00000465887 SYNE1Q8NF91 8797 aaKnown RBP4.69□□□□□ -1.66
POLR1D-204ENST00000465887 KRTAP12-4P60329 112 aa4.67□□□□□ -1.66
POLR1D-204ENST00000465887 KRTAP20-2Q3LI61 65 aa4.53□□□□□ -1.68
POLR1D-204ENST00000465887 HMCN1Q96RW7 5635 aa4.52□□□□□ -1.69
POLR1D-204ENST00000465887 KRTAP6-2Q3LI66 62 aa4.42□□□□□ -1.7
POLR1D-204ENST00000465887 KRTAP5-2Q701N4 177 aa4.36□□□□□ -1.71
POLR1D-204ENST00000465887 MT3P25713 68 aa4.32□□□□□ -1.72
POLR1D-204ENST00000465887 PRM1P04553 51 aa4.2□□□□□ -1.74
POLR1D-204ENST00000465887 LCE3EQ5T5B0 92 aa4.17□□□□□ -1.74
POLR1D-204ENST00000465887 LCE3DQ9BYE3 92 aa4.15□□□□□ -1.75
POLR1D-204ENST00000465887 AHNAK2Q8IVF2 5795 aa4.11□□□□□ -1.75
POLR1D-204ENST00000465887 OBSCNQ5VST9 7968 aa4.04□□□□□ -1.76
POLR1D-204ENST00000465887 KRTAP5-10Q6L8G5 202 aa3.98□□□□□ -1.77
POLR1D-204ENST00000465887 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.97□□□□□ -1.77
POLR1D-204ENST00000465887 GPR98Q8WXG9 6306 aa3.85□□□□□ -1.79
POLR1D-204ENST00000465887 KRTAP5-8O75690 187 aa3.84□□□□□ -1.79
POLR1D-204ENST00000465887 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
POLR1D-204ENST00000465887 KRTAP5-1Q6L8H4 278 aa3.8□□□□□ -1.8
POLR1D-204ENST00000465887 KRTAP5-7Q6L8G8 165 aa3.71□□□□□ -1.81
POLR1D-204ENST00000465887 KRTAP5-11Q6L8G4 156 aa3.62□□□□□ -1.83
POLR1D-204ENST00000465887 LCE1BQ5T7P3 118 aa3.59□□□□□ -1.83
POLR1D-204ENST00000465887 MUC5ACP98088 5654 aa3.59□□□□□ -1.84
POLR1D-204ENST00000465887 LCE1CQ5T751 118 aa3.55□□□□□ -1.84
POLR1D-204ENST00000465887 LCE1FQ5T754 118 aa3.5□□□□□ -1.85
POLR1D-204ENST00000465887 MUC5BQ9HC84 5762 aaPredicted RBP3.26□□□□□ -1.89
POLR1D-204ENST00000465887 KRTAP4-4Q9BYR3 166 aa3.25□□□□□ -1.89
POLR1D-204ENST00000465887 KRTAP21-2Q3LI59 83 aa3.13□□□□□ -1.91
POLR1D-204ENST00000465887 AHNAKQ09666 5890 aaKnown RBP3.1□□□□□ -1.91
POLR1D-204ENST00000465887 KRTAP21-1Q3LI58 79 aa2.75□□□□□ -1.97
POLR1D-204ENST00000465887 PHGR1C9JFL3 82 aa2.72□□□□□ -1.97
POLR1D-204ENST00000465887 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
POLR1D-204ENST00000465887 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 89.8 ms