RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 SPRR2EP22531 72 aa6.25□□□□□ -1.41
PTPRU-206ENST00000465525 SPRR2BP35325 72 aa6.25□□□□□ -1.41
PTPRU-206ENST00000465525 SPRR2AP35326 72 aa6.25□□□□□ -1.41
PTPRU-206ENST00000465525 KRTAP15-1Q3LI76 137 aa6.25□□□□□ -1.41
PTPRU-206ENST00000465525 LCE1AQ5T7P2 110 aa6.24□□□□□ -1.41
PTPRU-206ENST00000465525 NEBP20929 6669 aa6.21□□□□□ -1.42
PTPRU-206ENST00000465525 MT1LQ93083 61 aa6.15□□□□□ -1.42
PTPRU-206ENST00000465525 KRTAP19-3Q7Z4W3 81 aa6.13□□□□□ -1.43
PTPRU-206ENST00000465525 LCE5AQ5TCM9 118 aa6.07□□□□□ -1.44
PTPRU-206ENST00000465525 MT1GP13640 62 aa6.06□□□□□ -1.44
PTPRU-206ENST00000465525 SPRR2DP22532 72 aa6.04□□□□□ -1.44
PTPRU-206ENST00000465525 MT1MQ8N339 61 aa5.98□□□□□ -1.45
PTPRU-206ENST00000465525 KRTAP4-7Q9BYR0 210 aa5.98□□□□□ -1.45
PTPRU-206ENST00000465525 KRTAP19-4Q3LI73 84 aa5.93□□□□□ -1.46
PTPRU-206ENST00000465525 KRTAP2-3P0C7H8 128 aa5.91□□□□□ -1.46
PTPRU-206ENST00000465525 KRTAP4-3Q9BYR4 195 aa5.91□□□□□ -1.46
PTPRU-206ENST00000465525 KRTAP2-4Q9BYR9 128 aa5.91□□□□□ -1.46
PTPRU-206ENST00000465525 KRTAP20-1Q3LI63 56 aa5.9□□□□□ -1.47
PTPRU-206ENST00000465525 LUZP6Q538Z0 58 aa5.9□□□□□ -1.47
PTPRU-206ENST00000465525 SPRR5A0A1B0GTR4 108 aa5.89□□□□□ -1.47
PTPRU-206ENST00000465525 LCE3CQ5T5A8 94 aa5.89□□□□□ -1.47
PTPRU-206ENST00000465525 NDUFAF8A1L188 74 aa5.88□□□□□ -1.47
PTPRU-206ENST00000465525 LCE3BQ5TA77 95 aa5.84□□□□□ -1.47
PTPRU-206ENST00000465525 DSTQ03001 7570 aaKnown RBP5.77□□□□□ -1.49
PTPRU-206ENST00000465525 KRTAP2-2Q9BYT5 123 aa5.75□□□□□ -1.49
PTPRU-206ENST00000465525 KRTAP2-1Q9BYU5 128 aa5.75□□□□□ -1.49
PTPRU-206ENST00000465525 LOC100996750A0A140TA64 210 aa5.63□□□□□ -1.51
PTPRU-206ENST00000465525 H3BS24 57 aa5.62□□□□□ -1.51
PTPRU-206ENST00000465525 KRTAP9-6A8MVA2 160 aa5.6□□□□□ -1.51
PTPRU-206ENST00000465525 KRTAP5-5Q701N2 237 aaPredicted RBP5.4□□□□□ -1.55
PTPRU-206ENST00000465525 LCE4AQ5TA78 99 aa5.38□□□□□ -1.55
PTPRU-206ENST00000465525 KRTAP5-4Q6L8H1 288 aa5.37□□□□□ -1.55
PTPRU-206ENST00000465525 A0A0A0MQY5 61 aa5.31□□□□□ -1.56
PTPRU-206ENST00000465525 KRTAP4-9Q9BYQ8 210 aa5.29□□□□□ -1.56
PTPRU-206ENST00000465525 MT4P47944 62 aa5.24□□□□□ -1.57
PTPRU-206ENST00000465525 LCE1DQ5T752 114 aa5.23□□□□□ -1.57
PTPRU-206ENST00000465525 MT1AP04731 61 aa5.21□□□□□ -1.57
PTPRU-206ENST00000465525 KRTAP6-1Q3LI64 71 aa5.2□□□□□ -1.58
PTPRU-206ENST00000465525 KRTAP12-4P60329 112 aa5.15□□□□□ -1.58
PTPRU-206ENST00000465525 KRTAP4-6Q9BYQ5 205 aa5.15□□□□□ -1.58
PTPRU-206ENST00000465525 HMCN1Q96RW7 5635 aa5.15□□□□□ -1.59
PTPRU-206ENST00000465525 SYNE1Q8NF91 8797 aaKnown RBP5.12□□□□□ -1.59
PTPRU-206ENST00000465525 KRTAP20-2Q3LI61 65 aa5.03□□□□□ -1.6
PTPRU-206ENST00000465525 KRTAP9-4Q9BYQ2 154 aa4.98□□□□□ -1.61
PTPRU-206ENST00000465525 INE1O15225 51 aa4.92□□□□□ -1.62
PTPRU-206ENST00000465525 KRTAP5-3Q6L8H2 238 aa4.86□□□□□ -1.63
PTPRU-206ENST00000465525 KRTAP6-2Q3LI66 62 aa4.85□□□□□ -1.63
PTPRU-206ENST00000465525 KRTAP5-2Q701N4 177 aa4.79□□□□□ -1.64
PTPRU-206ENST00000465525 MT3P25713 68 aa4.74□□□□□ -1.65
PTPRU-206ENST00000465525 AHNAK2Q8IVF2 5795 aa4.73□□□□□ -1.65
PTPRU-206ENST00000465525 GPR98Q8WXG9 6306 aa4.61□□□□□ -1.67
PTPRU-206ENST00000465525 KRTAP5-10Q6L8G5 202 aa4.59□□□□□ -1.67
PTPRU-206ENST00000465525 KRTAP4-11Q9BYQ6 195 aa4.48□□□□□ -1.69
PTPRU-206ENST00000465525 OBSCNQ5VST9 7968 aa4.41□□□□□ -1.7
PTPRU-206ENST00000465525 LCE3DQ9BYE3 92 aa4.36□□□□□ -1.71
PTPRU-206ENST00000465525 KRTAP5-7Q6L8G8 165 aa4.35□□□□□ -1.71
PTPRU-206ENST00000465525 KRTAP5-8O75690 187 aa4.31□□□□□ -1.72
PTPRU-206ENST00000465525 LCE1EQ5T753 118 aa4.23□□□□□ -1.73
PTPRU-206ENST00000465525 LCE3EQ5T5B0 92 aa4.21□□□□□ -1.74
PTPRU-206ENST00000465525 KRTAP5-1Q6L8H4 278 aa4.2□□□□□ -1.74
PTPRU-206ENST00000465525 MUC5ACP98088 5654 aa4.06□□□□□ -1.76
PTPRU-206ENST00000465525 KRTAP9-9Q9BYP9 154 aa4□□□□□ -1.77
PTPRU-206ENST00000465525 LCE1BQ5T7P3 118 aa3.97□□□□□ -1.77
PTPRU-206ENST00000465525 LCE1CQ5T751 118 aa3.93□□□□□ -1.78
PTPRU-206ENST00000465525 KRTAP4-2Q9BYR5 136 aa3.93□□□□□ -1.78
PTPRU-206ENST00000465525 MUC5BQ9HC84 5762 aaPredicted RBP3.85□□□□□ -1.79
PTPRU-206ENST00000465525 AHNAKQ09666 5890 aaKnown RBP3.74□□□□□ -1.81
PTPRU-206ENST00000465525 PRM1P04553 51 aa3.74□□□□□ -1.81
PTPRU-206ENST00000465525 KRTAP4-12Q9BQ66 201 aa3.72□□□□□ -1.81
PTPRU-206ENST00000465525 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
PTPRU-206ENST00000465525 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
PTPRU-206ENST00000465525 KRTAP21-2Q3LI59 83 aa3.39□□□□□ -1.87
PTPRU-206ENST00000465525 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
PTPRU-206ENST00000465525 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
PTPRU-206ENST00000465525 PHGR1C9JFL3 82 aa3.01□□□□□ -1.93
PTPRU-206ENST00000465525 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
PTPRU-206ENST00000465525 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
PTPRU-206ENST00000465525 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 96.6 ms