RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 MACF1Q9UPN3 7388 aaKnown RBP7.61□□□□□ -1.19
PDLIM2-216ENST00000464275 KRTAP4-7Q9BYR0 210 aa7.49□□□□□ -1.21
PDLIM2-216ENST00000464275 SYNE2Q8WXH0 6885 aaKnown RBP7.46□□□□□ -1.22
PDLIM2-216ENST00000464275 KRTAP19-3Q7Z4W3 81 aa7.4□□□□□ -1.22
PDLIM2-216ENST00000464275 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.4□□□□□ -1.23
PDLIM2-216ENST00000464275 KRTAP9-6A8MVA2 160 aa7.37□□□□□ -1.23
PDLIM2-216ENST00000464275 MT1GP13640 62 aa7.37□□□□□ -1.23
PDLIM2-216ENST00000464275 SPRR2FQ96RM1 72 aa7.37□□□□□ -1.23
PDLIM2-216ENST00000464275 MT1MQ8N339 61 aa7.31□□□□□ -1.24
PDLIM2-216ENST00000464275 MUC12Q9UKN1 5478 aa7.25□□□□□ -1.25
PDLIM2-216ENST00000464275 KRTAP2-3P0C7H8 128 aa7.22□□□□□ -1.25
PDLIM2-216ENST00000464275 LCE5AQ5TCM9 118 aa7.22□□□□□ -1.25
PDLIM2-216ENST00000464275 KRTAP2-4Q9BYR9 128 aa7.22□□□□□ -1.25
PDLIM2-216ENST00000464275 KRTAP2-1Q9BYU5 128 aa7.22□□□□□ -1.25
PDLIM2-216ENST00000464275 KRTAP4-3Q9BYR4 195 aa7.19□□□□□ -1.26
PDLIM2-216ENST00000464275 KRTAP5-9P26371 169 aa7.17□□□□□ -1.26
PDLIM2-216ENST00000464275 KRTAP9-7A8MTY7 169 aa7.09□□□□□ -1.27
PDLIM2-216ENST00000464275 KRTAP6-3Q3LI67 103 aa7.08□□□□□ -1.28
PDLIM2-216ENST00000464275 MDN1Q9NU22 5596 aa7.06□□□□□ -1.28
PDLIM2-216ENST00000464275 LOC100996750A0A140TA64 210 aa7.02□□□□□ -1.29
PDLIM2-216ENST00000464275 LCE1AQ5T7P2 110 aa7□□□□□ -1.29
PDLIM2-216ENST00000464275 SPRR2EP22531 72 aa6.91□□□□□ -1.3
PDLIM2-216ENST00000464275 SPRR2BP35325 72 aa6.91□□□□□ -1.3
PDLIM2-216ENST00000464275 SPRR2AP35326 72 aa6.91□□□□□ -1.3
PDLIM2-216ENST00000464275 NEBP20929 6669 aa6.71□□□□□ -1.34
PDLIM2-216ENST00000464275 DSTQ03001 7570 aaKnown RBP6.68□□□□□ -1.34
PDLIM2-216ENST00000464275 SPRR2DP22532 72 aa6.65□□□□□ -1.34
PDLIM2-216ENST00000464275 KRTAP5-5Q701N2 237 aaPredicted RBP6.54□□□□□ -1.36
PDLIM2-216ENST00000464275 MT1AP04731 61 aa6.52□□□□□ -1.37
PDLIM2-216ENST00000464275 KRTAP6-1Q3LI64 71 aa6.47□□□□□ -1.37
PDLIM2-216ENST00000464275 LCE3BQ5TA77 95 aa6.37□□□□□ -1.39
PDLIM2-216ENST00000464275 KRTAP12-4P60329 112 aa6.28□□□□□ -1.4
PDLIM2-216ENST00000464275 KRTAP20-1Q3LI63 56 aa6.27□□□□□ -1.41
PDLIM2-216ENST00000464275 KRTAP9-4Q9BYQ2 154 aa6.17□□□□□ -1.42
PDLIM2-216ENST00000464275 SYNE1Q8NF91 8797 aaKnown RBP6.14□□□□□ -1.43
PDLIM2-216ENST00000464275 KRTAP2-2Q9BYT5 123 aa6.12□□□□□ -1.43
PDLIM2-216ENST00000464275 KRTAP5-4Q6L8H1 288 aa6.08□□□□□ -1.44
PDLIM2-216ENST00000464275 KRTAP4-9Q9BYQ8 210 aa6.06□□□□□ -1.44
PDLIM2-216ENST00000464275 LCE3DQ9BYE3 92 aa5.97□□□□□ -1.45
PDLIM2-216ENST00000464275 LCE3EQ5T5B0 92 aa5.91□□□□□ -1.46
PDLIM2-216ENST00000464275 LCE4AQ5TA78 99 aa5.9□□□□□ -1.46
PDLIM2-216ENST00000464275 KRTAP6-2Q3LI66 62 aa5.89□□□□□ -1.47
PDLIM2-216ENST00000464275 MT3P25713 68 aa5.89□□□□□ -1.47
PDLIM2-216ENST00000464275 MT4P47944 62 aa5.8□□□□□ -1.48
PDLIM2-216ENST00000464275 KRTAP4-6Q9BYQ5 205 aa5.76□□□□□ -1.49
PDLIM2-216ENST00000464275 LCE1DQ5T752 114 aa5.7□□□□□ -1.5
PDLIM2-216ENST00000464275 HMCN1Q96RW7 5635 aa5.68□□□□□ -1.5
PDLIM2-216ENST00000464275 KRTAP20-2Q3LI61 65 aa5.67□□□□□ -1.5
PDLIM2-216ENST00000464275 KRTAP5-2Q701N4 177 aa5.58□□□□□ -1.52
PDLIM2-216ENST00000464275 PRM1P04553 51 aa5.52□□□□□ -1.53
PDLIM2-216ENST00000464275 KRTAP5-3Q6L8H2 238 aa5.45□□□□□ -1.54
PDLIM2-216ENST00000464275 OBSCNQ5VST9 7968 aa5.31□□□□□ -1.56
PDLIM2-216ENST00000464275 AHNAK2Q8IVF2 5795 aa5.1□□□□□ -1.59
PDLIM2-216ENST00000464275 LCE1EQ5T753 118 aa5.02□□□□□ -1.61
PDLIM2-216ENST00000464275 KRTAP5-10Q6L8G5 202 aa4.85□□□□□ -1.63
PDLIM2-216ENST00000464275 KRTAP4-11Q9BYQ6 195 aa4.85□□□□□ -1.63
PDLIM2-216ENST00000464275 GPR98Q8WXG9 6306 aa4.81□□□□□ -1.64
PDLIM2-216ENST00000464275 KRTAP5-1Q6L8H4 278 aa4.76□□□□□ -1.65
PDLIM2-216ENST00000464275 MUC5ACP98088 5654 aa4.74□□□□□ -1.65
PDLIM2-216ENST00000464275 LCE1BQ5T7P3 118 aa4.74□□□□□ -1.65
PDLIM2-216ENST00000464275 LCE1CQ5T751 118 aa4.69□□□□□ -1.66
PDLIM2-216ENST00000464275 KRTAP4-2Q9BYR5 136 aa4.67□□□□□ -1.66
PDLIM2-216ENST00000464275 KRTAP5-8O75690 187 aa4.66□□□□□ -1.66
PDLIM2-216ENST00000464275 KRTAP5-7Q6L8G8 165 aa4.56□□□□□ -1.68
PDLIM2-216ENST00000464275 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.42□□□□□ -1.7
PDLIM2-216ENST00000464275 KRTAP9-9Q9BYP9 154 aa4.28□□□□□ -1.72
PDLIM2-216ENST00000464275 KRTAP21-2Q3LI59 83 aa4.22□□□□□ -1.73
PDLIM2-216ENST00000464275 MUC5BQ9HC84 5762 aaPredicted RBP4.17□□□□□ -1.74
PDLIM2-216ENST00000464275 KRTAP5-11Q6L8G4 156 aa4.1□□□□□ -1.75
PDLIM2-216ENST00000464275 AHNAKQ09666 5890 aaKnown RBP3.92□□□□□ -1.78
PDLIM2-216ENST00000464275 KRTAP4-12Q9BQ66 201 aa3.81□□□□□ -1.8
PDLIM2-216ENST00000464275 KRTAP4-4Q9BYR3 166 aa3.74□□□□□ -1.81
PDLIM2-216ENST00000464275 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
PDLIM2-216ENST00000464275 KRTAP21-1Q3LI58 79 aa3.55□□□□□ -1.84
PDLIM2-216ENST00000464275 PHGR1C9JFL3 82 aa3.51□□□□□ -1.85
PDLIM2-216ENST00000464275 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
PDLIM2-216ENST00000464275 MUC16Q8WXI7 14507 aa2.35□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 9 ms