RNA–Protein interactions for RNA: ENST00000464025.5

LMO2-204, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,550 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-204ENST00000464025 LCE3CQ5T5A8 94 aa6.33□□□□□ -1.4
LMO2-204ENST00000464025 A0A0A0MQY5 61 aa6.31□□□□□ -1.4
LMO2-204ENST00000464025 KMT2DO14686 5537 aa6.3□□□□□ -1.4
LMO2-204ENST00000464025 LCE1DQ5T752 114 aa6.3□□□□□ -1.4
LMO2-204ENST00000464025 MT1EP04732 61 aa6.23□□□□□ -1.41
LMO2-204ENST00000464025 MT1LQ93083 61 aa6.16□□□□□ -1.42
LMO2-204ENST00000464025 KRTAP4-9Q9BYQ8 210 aa6.14□□□□□ -1.43
LMO2-204ENST00000464025 KRTAP4-2Q9BYR5 136 aa6.1□□□□□ -1.43
LMO2-204ENST00000464025 KRTAP9-6A8MVA2 160 aa6.01□□□□□ -1.45
LMO2-204ENST00000464025 FCGBPQ9Y6R7 5405 aaPredicted RBP5.99□□□□□ -1.45
LMO2-204ENST00000464025 FSIP2Q5CZC0 6907 aa5.96□□□□□ -1.46
LMO2-204ENST00000464025 MT1GP13640 62 aa5.89□□□□□ -1.47
LMO2-204ENST00000464025 KRTAP19-3Q7Z4W3 81 aa5.89□□□□□ -1.47
LMO2-204ENST00000464025 KRTAP4-11Q9BYQ6 195 aa5.84□□□□□ -1.47
LMO2-204ENST00000464025 MT1MQ8N339 61 aa5.82□□□□□ -1.48
LMO2-204ENST00000464025 INE1O15225 51 aa5.8□□□□□ -1.48
LMO2-204ENST00000464025 KRTAP2-3P0C7H8 128 aa5.79□□□□□ -1.48
LMO2-204ENST00000464025 KRTAP2-4Q9BYR9 128 aa5.79□□□□□ -1.48
LMO2-204ENST00000464025 KRTAP2-1Q9BYU5 128 aa5.79□□□□□ -1.48
LMO2-204ENST00000464025 KRTAP5-3Q6L8H2 238 aa5.77□□□□□ -1.49
LMO2-204ENST00000464025 LCE5AQ5TCM9 118 aa5.75□□□□□ -1.49
LMO2-204ENST00000464025 SPRR2FQ96RM1 72 aa5.74□□□□□ -1.49
LMO2-204ENST00000464025 KRTAP4-3Q9BYR4 195 aa5.7□□□□□ -1.5
LMO2-204ENST00000464025 CRCT1Q9UGL9 99 aa5.68□□□□□ -1.5
LMO2-204ENST00000464025 MUC12Q9UKN1 5478 aa5.67□□□□□ -1.5
LMO2-204ENST00000464025 MACF1Q9UPN3 7388 aaKnown RBP5.66□□□□□ -1.5
LMO2-204ENST00000464025 KRTAP5-9P26371 169 aa5.62□□□□□ -1.51
LMO2-204ENST00000464025 LCE4AQ5TA78 99 aa5.56□□□□□ -1.52
LMO2-204ENST00000464025 LCE1AQ5T7P2 110 aa5.48□□□□□ -1.53
LMO2-204ENST00000464025 SYNE2Q8WXH0 6885 aaKnown RBP5.39□□□□□ -1.55
LMO2-204ENST00000464025 KRTAP9-7A8MTY7 169 aa5.38□□□□□ -1.55
LMO2-204ENST00000464025 SPRR2EP22531 72 aa5.33□□□□□ -1.56
LMO2-204ENST00000464025 SPRR2BP35325 72 aa5.33□□□□□ -1.56
LMO2-204ENST00000464025 SPRR2AP35326 72 aa5.33□□□□□ -1.56
LMO2-204ENST00000464025 KRTAP6-3Q3LI67 103 aa5.3□□□□□ -1.56
LMO2-204ENST00000464025 DSTQ03001 7570 aaKnown RBP5.26□□□□□ -1.57
LMO2-204ENST00000464025 MDN1Q9NU22 5596 aa5.24□□□□□ -1.57
LMO2-204ENST00000464025 MT1AP04731 61 aa5.24□□□□□ -1.57
LMO2-204ENST00000464025 KRTAP5-5Q701N2 237 aaPredicted RBP5.24□□□□□ -1.57
LMO2-204ENST00000464025 KRTAP6-1Q3LI64 71 aa5.16□□□□□ -1.58
LMO2-204ENST00000464025 SPRR2DP22532 72 aa5.13□□□□□ -1.59
LMO2-204ENST00000464025 SYNE1Q8NF91 8797 aaKnown RBP4.95□□□□□ -1.62
LMO2-204ENST00000464025 KRTAP12-4P60329 112 aa4.95□□□□□ -1.62
LMO2-204ENST00000464025 NEBP20929 6669 aa4.85□□□□□ -1.63
LMO2-204ENST00000464025 KRTAP5-4Q6L8H1 288 aa4.81□□□□□ -1.64
LMO2-204ENST00000464025 LCE3DQ9BYE3 92 aa4.81□□□□□ -1.64
LMO2-204ENST00000464025 LCE3EQ5T5B0 92 aa4.74□□□□□ -1.65
LMO2-204ENST00000464025 MT3P25713 68 aa4.72□□□□□ -1.65
LMO2-204ENST00000464025 KRTAP6-2Q3LI66 62 aa4.67□□□□□ -1.66
LMO2-204ENST00000464025 KRTAP2-2Q9BYT5 123 aa4.47□□□□□ -1.69
LMO2-204ENST00000464025 KRTAP5-2Q701N4 177 aa4.44□□□□□ -1.7
LMO2-204ENST00000464025 KRTAP20-2Q3LI61 65 aa4.44□□□□□ -1.7
LMO2-204ENST00000464025 MT4P47944 62 aa4.42□□□□□ -1.7
LMO2-204ENST00000464025 KRTAP20-1Q3LI63 56 aa4.35□□□□□ -1.71
LMO2-204ENST00000464025 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
LMO2-204ENST00000464025 PRM1P04553 51 aa4.31□□□□□ -1.72
LMO2-204ENST00000464025 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.21□□□□□ -1.74
LMO2-204ENST00000464025 HMCN1Q96RW7 5635 aa4.2□□□□□ -1.74
LMO2-204ENST00000464025 LCE1EQ5T753 118 aa4.03□□□□□ -1.76
LMO2-204ENST00000464025 KRTAP5-11Q6L8G4 156 aa3.88□□□□□ -1.79
LMO2-204ENST00000464025 KRTAP5-10Q6L8G5 202 aa3.8□□□□□ -1.8
LMO2-204ENST00000464025 MUC5ACP98088 5654 aa3.79□□□□□ -1.8
LMO2-204ENST00000464025 LCE1CQ5T751 118 aa3.76□□□□□ -1.81
LMO2-204ENST00000464025 LCE1BQ5T7P3 118 aa3.76□□□□□ -1.81
LMO2-204ENST00000464025 KRTAP5-1Q6L8H4 278 aa3.76□□□□□ -1.81
LMO2-204ENST00000464025 KRTAP5-7Q6L8G8 165 aa3.63□□□□□ -1.83
LMO2-204ENST00000464025 KRTAP5-8O75690 187 aa3.62□□□□□ -1.83
LMO2-204ENST00000464025 AHNAK2Q8IVF2 5795 aa3.57□□□□□ -1.84
LMO2-204ENST00000464025 KRTAP4-4Q9BYR3 166 aa3.47□□□□□ -1.85
LMO2-204ENST00000464025 KRTAP21-2Q3LI59 83 aa3.41□□□□□ -1.86
LMO2-204ENST00000464025 GPR98Q8WXG9 6306 aa3□□□□□ -1.93
LMO2-204ENST00000464025 MUC5BQ9HC84 5762 aaPredicted RBP3□□□□□ -1.93
LMO2-204ENST00000464025 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
LMO2-204ENST00000464025 PHGR1C9JFL3 82 aa2.8□□□□□ -1.96
LMO2-204ENST00000464025 KRTAP21-1Q3LI58 79 aa2.76□□□□□ -1.97
LMO2-204ENST00000464025 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
LMO2-204ENST00000464025 AHNAKQ09666 5890 aaKnown RBP2.49□□□□□ -2.01
LMO2-204ENST00000464025 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 133.1 ms