RNA–Protein interactions for RNA: ENST00000463328.5

TRA2B-207, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-207ENST00000463328 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.32□□□□□ -2.04
TRA2B-207ENST00000463328 SPRR5A0A1B0GTR4 108 aa2.31□□□□□ -2.04
TRA2B-207ENST00000463328 FSIP2Q5CZC0 6907 aa2.31□□□□□ -2.04
TRA2B-207ENST00000463328 LCE3CQ5T5A8 94 aa2.3□□□□□ -2.04
TRA2B-207ENST00000463328 LCE1EQ5T753 118 aa2.29□□□□□ -2.04
TRA2B-207ENST00000463328 USH2AO75445 5202 aa2.24□□□□□ -2.05
TRA2B-207ENST00000463328 M0R2T5 61 aa2.23□□□□□ -2.05
TRA2B-207ENST00000463328 MT3P25713 68 aa2.21□□□□□ -2.06
TRA2B-207ENST00000463328 MT1HP80294 61 aa2.21□□□□□ -2.06
TRA2B-207ENST00000463328 AHNAK2Q8IVF2 5795 aa2.21□□□□□ -2.06
TRA2B-207ENST00000463328 KRTAP2-3P0C7H8 128 aa2.2□□□□□ -2.06
TRA2B-207ENST00000463328 KRTAP2-4Q9BYR9 128 aa2.2□□□□□ -2.06
TRA2B-207ENST00000463328 SYNE2Q8WXH0 6885 aaKnown RBP2.2□□□□□ -2.06
TRA2B-207ENST00000463328 KRTAP10-10P60014 251 aa2.2□□□□□ -2.06
TRA2B-207ENST00000463328 KRTAP6-3Q3LI67 103 aa2.2□□□□□ -2.06
TRA2B-207ENST00000463328 SPRR2GQ9BYE4 73 aa2.19□□□□□ -2.06
TRA2B-207ENST00000463328 MACF1Q9UPN3 7388 aaKnown RBP2.16□□□□□ -2.06
TRA2B-207ENST00000463328 MT2AP02795 61 aa2.14□□□□□ -2.07
TRA2B-207ENST00000463328 KRTAP10-7P60409 375 aaPredicted RBP2.13□□□□□ -2.07
TRA2B-207ENST00000463328 KRTAP10-12P60413 245 aa2.13□□□□□ -2.07
TRA2B-207ENST00000463328 LCE3EQ5T5B0 92 aa2.13□□□□□ -2.07
TRA2B-207ENST00000463328 KRTAP19-8Q3LI54 63 aa2.12□□□□□ -2.07
TRA2B-207ENST00000463328 MT1FP04733 61 aa2.11□□□□□ -2.07
TRA2B-207ENST00000463328 TNP1P09430 55 aa2.1□□□□□ -2.07
TRA2B-207ENST00000463328 KRTAP5-11Q6L8G4 156 aa2.1□□□□□ -2.07
TRA2B-207ENST00000463328 KRTAP5-10Q6L8G5 202 aa2.09□□□□□ -2.07
TRA2B-207ENST00000463328 KMT2DO14686 5537 aa2.05□□□□□ -2.08
TRA2B-207ENST00000463328 KRTAP12-4P60329 112 aa2.05□□□□□ -2.08
TRA2B-207ENST00000463328 MT1BP07438 61 aa2.04□□□□□ -2.08
TRA2B-207ENST00000463328 KRTAP2-1Q9BYU5 128 aa2.02□□□□□ -2.09
TRA2B-207ENST00000463328 KRTAP10-5P60370 271 aa2□□□□□ -2.09
TRA2B-207ENST00000463328 KRTAP5-9P26371 169 aa2□□□□□ -2.09
TRA2B-207ENST00000463328 MT1XP80297 61 aa2□□□□□ -2.09
TRA2B-207ENST00000463328 KRTAP8-1Q8IUC2 63 aa1.99□□□□□ -2.09
TRA2B-207ENST00000463328 LCE3DQ9BYE3 92 aa1.98□□□□□ -2.09
TRA2B-207ENST00000463328 MUC5ACP98088 5654 aa1.98□□□□□ -2.09
TRA2B-207ENST00000463328 LCE3AQ5TA76 89 aa1.95□□□□□ -2.1
TRA2B-207ENST00000463328 KRTAP5-4Q6L8H1 288 aa1.95□□□□□ -2.1
TRA2B-207ENST00000463328 KRTAP5-1Q6L8H4 278 aa1.93□□□□□ -2.1
TRA2B-207ENST00000463328 MDN1Q9NU22 5596 aa1.91□□□□□ -2.1
TRA2B-207ENST00000463328 FCGBPQ9Y6R7 5405 aaPredicted RBP1.9□□□□□ -2.11
TRA2B-207ENST00000463328 KRTAP12-3P60328 96 aa1.9□□□□□ -2.11
TRA2B-207ENST00000463328 KRTAP19-6Q3LI70 58 aa1.89□□□□□ -2.11
TRA2B-207ENST00000463328 MUC12Q9UKN1 5478 aa1.88□□□□□ -2.11
TRA2B-207ENST00000463328 KRTAP4-4Q9BYR3 166 aa1.87□□□□□ -2.11
TRA2B-207ENST00000463328 DSTQ03001 7570 aaKnown RBP1.82□□□□□ -2.12
TRA2B-207ENST00000463328 OBSCNQ5VST9 7968 aa1.82□□□□□ -2.12
TRA2B-207ENST00000463328 KRTAP19-5Q3LI72 72 aa1.82□□□□□ -2.12
TRA2B-207ENST00000463328 KRTAP19-7Q3SYF9 63 aa1.79□□□□□ -2.12
TRA2B-207ENST00000463328 MT1EP04732 61 aa1.75□□□□□ -2.13
TRA2B-207ENST00000463328 MT1LQ93083 61 aa1.73□□□□□ -2.13
TRA2B-207ENST00000463328 MT1GP13640 62 aa1.7□□□□□ -2.14
TRA2B-207ENST00000463328 SYNE1Q8NF91 8797 aaKnown RBP1.69□□□□□ -2.14
TRA2B-207ENST00000463328 KRTAP9-6A8MVA2 160 aa1.68□□□□□ -2.14
TRA2B-207ENST00000463328 KRTAP19-3Q7Z4W3 81 aa1.68□□□□□ -2.14
TRA2B-207ENST00000463328 SPRR2FQ96RM1 72 aa1.65□□□□□ -2.15
TRA2B-207ENST00000463328 KRTAP4-3Q9BYR4 195 aa1.65□□□□□ -2.15
TRA2B-207ENST00000463328 KRTAP5-2Q701N4 177 aa1.64□□□□□ -2.15
TRA2B-207ENST00000463328 MT1MQ8N339 61 aa1.64□□□□□ -2.15
TRA2B-207ENST00000463328 KRTAP5-8O75690 187 aa1.56□□□□□ -2.16
TRA2B-207ENST00000463328 SPRR2EP22531 72 aa1.56□□□□□ -2.16
TRA2B-207ENST00000463328 SPRR2BP35325 72 aa1.56□□□□□ -2.16
TRA2B-207ENST00000463328 SPRR2AP35326 72 aa1.56□□□□□ -2.16
TRA2B-207ENST00000463328 SPRR2DP22532 72 aa1.51□□□□□ -2.17
TRA2B-207ENST00000463328 KRTAP5-5Q701N2 237 aaPredicted RBP1.49□□□□□ -2.17
TRA2B-207ENST00000463328 MT1AP04731 61 aa1.49□□□□□ -2.17
TRA2B-207ENST00000463328 PRM1P04553 51 aa1.48□□□□□ -2.17
TRA2B-207ENST00000463328 MUC19Q7Z5P9 8384 aa1.48□□□□□ -2.17
TRA2B-207ENST00000463328 LCE1CQ5T751 118 aa1.47□□□□□ -2.17
TRA2B-207ENST00000463328 LCE1BQ5T7P3 118 aa1.47□□□□□ -2.17
TRA2B-207ENST00000463328 KRTAP6-1Q3LI64 71 aa1.44□□□□□ -2.18
TRA2B-207ENST00000463328 MT4P47944 62 aa1.32□□□□□ -2.2
TRA2B-207ENST00000463328 KRTAP6-2Q3LI66 62 aa1.3□□□□□ -2.2
TRA2B-207ENST00000463328 KRTAP20-2Q3LI61 65 aa1.28□□□□□ -2.2
TRA2B-207ENST00000463328 PHGR1C9JFL3 82 aa1.21□□□□□ -2.22
TRA2B-207ENST00000463328 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
TRA2B-207ENST00000463328 KRTAP21-2Q3LI59 83 aa0.96□□□□□ -2.25
TRA2B-207ENST00000463328 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 93.7 ms