RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 KRTAP9-4Q9BYQ2 154 aa6.68□□□□□ -1.34
LINC00960-201ENST00000463183 KRTAP19-5Q3LI72 72 aa6.63□□□□□ -1.35
LINC00960-201ENST00000463183 KRTAP19-3Q7Z4W3 81 aa6.62□□□□□ -1.35
LINC00960-201ENST00000463183 CDC42SE1Q9NRR8 79 aa6.62□□□□□ -1.35
LINC00960-201ENST00000463183 LCE5AQ5TCM9 118 aa6.6□□□□□ -1.35
LINC00960-201ENST00000463183 DSTQ03001 7570 aaKnown RBP6.6□□□□□ -1.35
LINC00960-201ENST00000463183 K7ERS5 55 aa6.59□□□□□ -1.35
LINC00960-201ENST00000463183 C10orf95Q9H7T3 257 aa6.56□□□□□ -1.36
LINC00960-201ENST00000463183 TNP1P09430 55 aa6.53□□□□□ -1.36
LINC00960-201ENST00000463183 LCE3AQ5TA76 89 aa6.5□□□□□ -1.37
LINC00960-201ENST00000463183 MT1GP13640 62 aa6.45□□□□□ -1.38
LINC00960-201ENST00000463183 LCE1DQ5T752 114 aa6.42□□□□□ -1.38
LINC00960-201ENST00000463183 PP632Q6XCG6 107 aa6.42□□□□□ -1.38
LINC00960-201ENST00000463183 MT1LQ93083 61 aa6.4□□□□□ -1.39
LINC00960-201ENST00000463183 KRTAP19-4Q3LI73 84 aa6.39□□□□□ -1.39
LINC00960-201ENST00000463183 MT1MQ8N339 61 aa6.37□□□□□ -1.39
LINC00960-201ENST00000463183 BRK1Q8WUW1 75 aa6.37□□□□□ -1.39
LINC00960-201ENST00000463183 KRTAP4-9Q9BYQ8 210 aa6.35□□□□□ -1.39
LINC00960-201ENST00000463183 KRTAP4-7Q9BYR0 210 aa6.33□□□□□ -1.4
LINC00960-201ENST00000463183 KRTAP25-1Q3LHN0 102 aa6.31□□□□□ -1.4
LINC00960-201ENST00000463183 LCE4AQ5TA78 99 aa6.29□□□□□ -1.4
LINC00960-201ENST00000463183 KRTAP4-3Q9BYR4 195 aa6.28□□□□□ -1.4
LINC00960-201ENST00000463183 ROMO1P60602 79 aa6.27□□□□□ -1.41
LINC00960-201ENST00000463183 KRTAP12-3P60328 96 aa6.23□□□□□ -1.41
LINC00960-201ENST00000463183 GPR98Q8WXG9 6306 aa6.21□□□□□ -1.41
LINC00960-201ENST00000463183 KRTAP23-1A1A580 65 aa6.16□□□□□ -1.42
LINC00960-201ENST00000463183 MT4P47944 62 aa6.16□□□□□ -1.42
LINC00960-201ENST00000463183 HMCN1Q96RW7 5635 aa6.12□□□□□ -1.43
LINC00960-201ENST00000463183 PRO0628Q9UI54 55 aa6.05□□□□□ -1.44
LINC00960-201ENST00000463183 KRTAP4-2Q9BYR5 136 aa6.04□□□□□ -1.44
LINC00960-201ENST00000463183 PMAIP1Q13794 54 aa6.03□□□□□ -1.44
LINC00960-201ENST00000463183 KRTAP4-11Q9BYQ6 195 aa6□□□□□ -1.45
LINC00960-201ENST00000463183 KRTAP5-4Q6L8H1 288 aa5.99□□□□□ -1.45
LINC00960-201ENST00000463183 AHNAK2Q8IVF2 5795 aa5.9□□□□□ -1.47
LINC00960-201ENST00000463183 KRTAP15-1Q3LI76 137 aa5.82□□□□□ -1.48
LINC00960-201ENST00000463183 KRTAP5-5Q701N2 237 aaPredicted RBP5.78□□□□□ -1.48
LINC00960-201ENST00000463183 LCE3CQ5T5A8 94 aa5.73□□□□□ -1.49
LINC00960-201ENST00000463183 SYNE1Q8NF91 8797 aaKnown RBP5.71□□□□□ -1.5
LINC00960-201ENST00000463183 KRTAP20-2Q3LI61 65 aa5.7□□□□□ -1.5
LINC00960-201ENST00000463183 KRTAP12-4P60329 112 aa5.68□□□□□ -1.5
LINC00960-201ENST00000463183 PRAC1Q96KF2 57 aa5.68□□□□□ -1.5
LINC00960-201ENST00000463183 KRTAP5-10Q6L8G5 202 aa5.65□□□□□ -1.51
LINC00960-201ENST00000463183 KTN1-AS1Q86SY8 53 aa5.65□□□□□ -1.51
LINC00960-201ENST00000463183 SPRR5A0A1B0GTR4 108 aa5.63□□□□□ -1.51
LINC00960-201ENST00000463183 KRTAP5-3Q6L8H2 238 aa5.56□□□□□ -1.52
LINC00960-201ENST00000463183 A0A0A0MQY5 61 aa5.48□□□□□ -1.53
LINC00960-201ENST00000463183 MT1AP04731 61 aa5.44□□□□□ -1.54
LINC00960-201ENST00000463183 KRTAP6-1Q3LI64 71 aa5.43□□□□□ -1.54
LINC00960-201ENST00000463183 KRTAP9-6A8MVA2 160 aa5.41□□□□□ -1.54
LINC00960-201ENST00000463183 KRTAP5-7Q6L8G8 165 aa5.41□□□□□ -1.54
LINC00960-201ENST00000463183 KRTAP5-2Q701N4 177 aa5.24□□□□□ -1.57
LINC00960-201ENST00000463183 KRTAP6-2Q3LI66 62 aa5.19□□□□□ -1.58
LINC00960-201ENST00000463183 OBSCNQ5VST9 7968 aa5.07□□□□□ -1.6
LINC00960-201ENST00000463183 KRTAP5-8O75690 187 aa5□□□□□ -1.61
LINC00960-201ENST00000463183 MT3P25713 68 aa4.97□□□□□ -1.61
LINC00960-201ENST00000463183 MUC5BQ9HC84 5762 aaPredicted RBP4.86□□□□□ -1.63
LINC00960-201ENST00000463183 AHNAKQ09666 5890 aaKnown RBP4.86□□□□□ -1.63
LINC00960-201ENST00000463183 MUC5ACP98088 5654 aa4.79□□□□□ -1.64
LINC00960-201ENST00000463183 KRTAP5-1Q6L8H4 278 aa4.72□□□□□ -1.65
LINC00960-201ENST00000463183 LUZP6Q538Z0 58 aa4.7□□□□□ -1.66
LINC00960-201ENST00000463183 LCE1EQ5T753 118 aa4.49□□□□□ -1.69
LINC00960-201ENST00000463183 LCE1BQ5T7P3 118 aa4.38□□□□□ -1.71
LINC00960-201ENST00000463183 NDUFAF8A1L188 74 aa4.27□□□□□ -1.73
LINC00960-201ENST00000463183 LCE1CQ5T751 118 aa4.19□□□□□ -1.74
LINC00960-201ENST00000463183 LCE3DQ9BYE3 92 aa4.15□□□□□ -1.75
LINC00960-201ENST00000463183 KRTAP5-11Q6L8G4 156 aa4.04□□□□□ -1.76
LINC00960-201ENST00000463183 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.02□□□□□ -1.77
LINC00960-201ENST00000463183 LCE3EQ5T5B0 92 aa3.95□□□□□ -1.78
LINC00960-201ENST00000463183 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
LINC00960-201ENST00000463183 INE1O15225 51 aa3.55□□□□□ -1.84
LINC00960-201ENST00000463183 KRTAP21-2Q3LI59 83 aa3.54□□□□□ -1.84
LINC00960-201ENST00000463183 PHGR1C9JFL3 82 aa3.35□□□□□ -1.87
LINC00960-201ENST00000463183 KRTAP4-4Q9BYR3 166 aa3.35□□□□□ -1.87
LINC00960-201ENST00000463183 PRM1P04553 51 aa3.23□□□□□ -1.89
LINC00960-201ENST00000463183 MUC19Q7Z5P9 8384 aa3.13□□□□□ -1.91
LINC00960-201ENST00000463183 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
LINC00960-201ENST00000463183 MUC16Q8WXI7 14507 aa2.14□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 11.8 ms