RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 C10orf95Q9H7T3 257 aa4.41□□□□□ -1.7
SSBP1-202ENST00000461433 KRTAP8-1Q8IUC2 63 aa4.39□□□□□ -1.71
SSBP1-202ENST00000461433 NEBP20929 6669 aa4.38□□□□□ -1.71
SSBP1-202ENST00000461433 K7ERS5 55 aa4.36□□□□□ -1.71
SSBP1-202ENST00000461433 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.36□□□□□ -1.71
SSBP1-202ENST00000461433 MUC12Q9UKN1 5478 aa4.33□□□□□ -1.72
SSBP1-202ENST00000461433 SPRR2FQ96RM1 72 aa4.32□□□□□ -1.72
SSBP1-202ENST00000461433 TNP1P09430 55 aa4.29□□□□□ -1.72
SSBP1-202ENST00000461433 KRTAP25-1Q3LHN0 102 aa4.29□□□□□ -1.72
SSBP1-202ENST00000461433 KRTAP20-1Q3LI63 56 aa4.25□□□□□ -1.73
SSBP1-202ENST00000461433 KRTAP19-7Q3SYF9 63 aa4.24□□□□□ -1.73
SSBP1-202ENST00000461433 MDN1Q9NU22 5596 aa4.24□□□□□ -1.73
SSBP1-202ENST00000461433 LCE3AQ5TA76 89 aa4.22□□□□□ -1.73
SSBP1-202ENST00000461433 LCE1AQ5T7P2 110 aa4.21□□□□□ -1.74
SSBP1-202ENST00000461433 SPRR2EP22531 72 aa4.19□□□□□ -1.74
SSBP1-202ENST00000461433 SPRR2BP35325 72 aa4.19□□□□□ -1.74
SSBP1-202ENST00000461433 SPRR2AP35326 72 aa4.19□□□□□ -1.74
SSBP1-202ENST00000461433 ROMO1P60602 79 aa4.19□□□□□ -1.74
SSBP1-202ENST00000461433 KRTAP19-5Q3LI72 72 aa4.19□□□□□ -1.74
SSBP1-202ENST00000461433 MT1EP04732 61 aa4.17□□□□□ -1.74
SSBP1-202ENST00000461433 KRTAP23-1A1A580 65 aa4.14□□□□□ -1.75
SSBP1-202ENST00000461433 KRTAP2-3P0C7H8 128 aa4.12□□□□□ -1.75
SSBP1-202ENST00000461433 KRTAP2-4Q9BYR9 128 aa4.12□□□□□ -1.75
SSBP1-202ENST00000461433 KRTAP19-3Q7Z4W3 81 aa4.07□□□□□ -1.76
SSBP1-202ENST00000461433 SPRR2DP22532 72 aa4.05□□□□□ -1.76
SSBP1-202ENST00000461433 KRTAP12-3P60328 96 aa4.05□□□□□ -1.76
SSBP1-202ENST00000461433 MT1LQ93083 61 aa4.03□□□□□ -1.76
SSBP1-202ENST00000461433 MT1GP13640 62 aa4□□□□□ -1.77
SSBP1-202ENST00000461433 KRTAP5-11Q6L8G4 156 aa4□□□□□ -1.77
SSBP1-202ENST00000461433 KRTAP2-2Q9BYT5 123 aa3.99□□□□□ -1.77
SSBP1-202ENST00000461433 KRTAP2-1Q9BYU5 128 aa3.99□□□□□ -1.77
SSBP1-202ENST00000461433 MT1MQ8N339 61 aa3.95□□□□□ -1.78
SSBP1-202ENST00000461433 PP632Q6XCG6 107 aa3.94□□□□□ -1.78
SSBP1-202ENST00000461433 KRTAP15-1Q3LI76 137 aa3.9□□□□□ -1.78
SSBP1-202ENST00000461433 KRTAP4-3Q9BYR4 195 aa3.87□□□□□ -1.79
SSBP1-202ENST00000461433 DSTQ03001 7570 aaKnown RBP3.84□□□□□ -1.79
SSBP1-202ENST00000461433 NDUFAF8A1L188 74 aa3.83□□□□□ -1.8
SSBP1-202ENST00000461433 GPR98Q8WXG9 6306 aa3.77□□□□□ -1.81
SSBP1-202ENST00000461433 LCE3CQ5T5A8 94 aa3.77□□□□□ -1.81
SSBP1-202ENST00000461433 KRTAP5-1Q6L8H4 278 aa3.71□□□□□ -1.82
SSBP1-202ENST00000461433 KRTAP5-4Q6L8H1 288 aa3.69□□□□□ -1.82
SSBP1-202ENST00000461433 A0A0A0MQY5 61 aa3.67□□□□□ -1.82
SSBP1-202ENST00000461433 LUZP6Q538Z0 58 aa3.65□□□□□ -1.82
SSBP1-202ENST00000461433 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
SSBP1-202ENST00000461433 KRTAP5-5Q701N2 237 aaPredicted RBP3.62□□□□□ -1.83
SSBP1-202ENST00000461433 KRTAP9-6A8MVA2 160 aa3.59□□□□□ -1.84
SSBP1-202ENST00000461433 MT4P47944 62 aa3.55□□□□□ -1.84
SSBP1-202ENST00000461433 HMCN1Q96RW7 5635 aa3.48□□□□□ -1.85
SSBP1-202ENST00000461433 SPRR5A0A1B0GTR4 108 aa3.43□□□□□ -1.86
SSBP1-202ENST00000461433 MT1AP04731 61 aa3.43□□□□□ -1.86
SSBP1-202ENST00000461433 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
SSBP1-202ENST00000461433 KRTAP6-1Q3LI64 71 aa3.41□□□□□ -1.86
SSBP1-202ENST00000461433 KRTAP12-4P60329 112 aa3.4□□□□□ -1.86
SSBP1-202ENST00000461433 AHNAK2Q8IVF2 5795 aa3.39□□□□□ -1.87
SSBP1-202ENST00000461433 KRTAP20-2Q3LI61 65 aa3.39□□□□□ -1.87
SSBP1-202ENST00000461433 SYNE1Q8NF91 8797 aaKnown RBP3.36□□□□□ -1.87
SSBP1-202ENST00000461433 KRTAP5-10Q6L8G5 202 aa3.32□□□□□ -1.88
SSBP1-202ENST00000461433 KRTAP5-2Q701N4 177 aa3.23□□□□□ -1.89
SSBP1-202ENST00000461433 INE1O15225 51 aa3.21□□□□□ -1.9
SSBP1-202ENST00000461433 KRTAP6-2Q3LI66 62 aa3.19□□□□□ -1.9
SSBP1-202ENST00000461433 KRTAP5-7Q6L8G8 165 aa3.18□□□□□ -1.9
SSBP1-202ENST00000461433 OBSCNQ5VST9 7968 aa3.12□□□□□ -1.91
SSBP1-202ENST00000461433 MT3P25713 68 aa3.11□□□□□ -1.91
SSBP1-202ENST00000461433 AHNAKQ09666 5890 aaKnown RBP2.93□□□□□ -1.94
SSBP1-202ENST00000461433 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
SSBP1-202ENST00000461433 MUC5BQ9HC84 5762 aaPredicted RBP2.85□□□□□ -1.95
SSBP1-202ENST00000461433 MUC5ACP98088 5654 aa2.77□□□□□ -1.97
SSBP1-202ENST00000461433 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
SSBP1-202ENST00000461433 LCE1FQ5T754 118 aa2.64□□□□□ -1.99
SSBP1-202ENST00000461433 LCE3EQ5T5B0 92 aa2.63□□□□□ -1.99
SSBP1-202ENST00000461433 LCE1CQ5T751 118 aa2.6□□□□□ -1.99
SSBP1-202ENST00000461433 LCE1BQ5T7P3 118 aa2.6□□□□□ -1.99
SSBP1-202ENST00000461433 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
SSBP1-202ENST00000461433 PRM1P04553 51 aa2.21□□□□□ -2.06
SSBP1-202ENST00000461433 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
SSBP1-202ENST00000461433 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.1
SSBP1-202ENST00000461433 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
SSBP1-202ENST00000461433 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 30.8 ms