RNA–Protein interactions for RNA: ENST00000461111.1

AGRN-203, Transcript of agrin, humanhuman

TSL 1 (best)

Gene AGRN, Length 3,385 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-203ENST00000461111 KRTAP2-1Q9BYU5 128 aa4.32□□□□□ -1.72
AGRN-203ENST00000461111 SSPOA2VEC9 5147 aa4.3□□□□□ -1.72
AGRN-203ENST00000461111 MUC12Q9UKN1 5478 aa4.29□□□□□ -1.72
AGRN-203ENST00000461111 LOC100996750A0A140TA64 210 aa4.21□□□□□ -1.74
AGRN-203ENST00000461111 KRTAP19-7Q3SYF9 63 aa4.19□□□□□ -1.74
AGRN-203ENST00000461111 KRTAP4-3Q9BYR4 195 aa4.18□□□□□ -1.74
AGRN-203ENST00000461111 SYNE2Q8WXH0 6885 aaKnown RBP4.18□□□□□ -1.74
AGRN-203ENST00000461111 KRTAP12-4P60329 112 aa4.17□□□□□ -1.74
AGRN-203ENST00000461111 MT1GP13640 62 aa4.14□□□□□ -1.75
AGRN-203ENST00000461111 MACF1Q9UPN3 7388 aaKnown RBP4.13□□□□□ -1.75
AGRN-203ENST00000461111 MT1LQ93083 61 aa4.12□□□□□ -1.75
AGRN-203ENST00000461111 MT1EP04732 61 aa4.07□□□□□ -1.76
AGRN-203ENST00000461111 KRTAP9-2Q9BYQ4 174 aa4.03□□□□□ -1.76
AGRN-203ENST00000461111 KRTAP4-9Q9BYQ8 210 aa3.97□□□□□ -1.77
AGRN-203ENST00000461111 LCE3BQ5TA77 95 aa3.97□□□□□ -1.77
AGRN-203ENST00000461111 MDN1Q9NU22 5596 aa3.9□□□□□ -1.78
AGRN-203ENST00000461111 SPRR2FQ96RM1 72 aa3.89□□□□□ -1.79
AGRN-203ENST00000461111 KRTAP19-6Q3LI70 58 aa3.83□□□□□ -1.8
AGRN-203ENST00000461111 MT1MQ8N339 61 aa3.83□□□□□ -1.8
AGRN-203ENST00000461111 KRTAP19-4Q3LI73 84 aa3.8□□□□□ -1.8
AGRN-203ENST00000461111 KRTAP19-3Q7Z4W3 81 aa3.8□□□□□ -1.8
AGRN-203ENST00000461111 KRTAP9-7A8MTY7 169 aa3.76□□□□□ -1.81
AGRN-203ENST00000461111 PRM1P04553 51 aa3.74□□□□□ -1.81
AGRN-203ENST00000461111 LCE4AQ5TA78 99 aa3.71□□□□□ -1.82
AGRN-203ENST00000461111 KRTAP9-4Q9BYQ2 154 aa3.68□□□□□ -1.82
AGRN-203ENST00000461111 LCE3DQ9BYE3 92 aa3.66□□□□□ -1.82
AGRN-203ENST00000461111 KRTAP9-6A0A140TA67 174 aa3.65□□□□□ -1.83
AGRN-203ENST00000461111 LCE3EQ5T5B0 92 aa3.62□□□□□ -1.83
AGRN-203ENST00000461111 LCE5AQ5TCM9 118 aa3.6□□□□□ -1.83
AGRN-203ENST00000461111 KRTAP9-9Q9BYP9 154 aa3.6□□□□□ -1.83
AGRN-203ENST00000461111 KRTAP6-1Q3LI64 71 aa3.59□□□□□ -1.83
AGRN-203ENST00000461111 KRTAP5-5Q701N2 237 aaPredicted RBP3.56□□□□□ -1.84
AGRN-203ENST00000461111 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.52□□□□□ -1.85
AGRN-203ENST00000461111 MT1AP04731 61 aa3.49□□□□□ -1.85
AGRN-203ENST00000461111 SPRR2EP22531 72 aa3.48□□□□□ -1.85
AGRN-203ENST00000461111 SPRR2BP35325 72 aa3.48□□□□□ -1.85
AGRN-203ENST00000461111 SPRR2AP35326 72 aa3.48□□□□□ -1.85
AGRN-203ENST00000461111 KRTAP6-2Q3LI66 62 aa3.45□□□□□ -1.86
AGRN-203ENST00000461111 KRTAP6-3Q3LI67 103 aa3.43□□□□□ -1.86
AGRN-203ENST00000461111 LCE1AQ5T7P2 110 aa3.39□□□□□ -1.87
AGRN-203ENST00000461111 KRTAP5-9P26371 169 aa3.38□□□□□ -1.87
AGRN-203ENST00000461111 SPRR2DP22532 72 aa3.31□□□□□ -1.88
AGRN-203ENST00000461111 KRTAP2-2Q9BYT5 123 aa3.26□□□□□ -1.89
AGRN-203ENST00000461111 NEBP20929 6669 aa3.25□□□□□ -1.89
AGRN-203ENST00000461111 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
AGRN-203ENST00000461111 LCE1EQ5T753 118 aa3.2□□□□□ -1.9
AGRN-203ENST00000461111 MT3P25713 68 aa3.15□□□□□ -1.91
AGRN-203ENST00000461111 MT4P47944 62 aa3.12□□□□□ -1.91
AGRN-203ENST00000461111 KRTAP4-12Q9BQ66 201 aa3.11□□□□□ -1.91
AGRN-203ENST00000461111 LCE1DQ5T752 114 aa3.03□□□□□ -1.92
AGRN-203ENST00000461111 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
AGRN-203ENST00000461111 KRTAP4-6Q9BYQ5 205 aa2.97□□□□□ -1.93
AGRN-203ENST00000461111 HMCN1Q96RW7 5635 aa2.96□□□□□ -1.94
AGRN-203ENST00000461111 KRTAP20-1Q3LI63 56 aa2.94□□□□□ -1.94
AGRN-203ENST00000461111 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
AGRN-203ENST00000461111 KRTAP5-4Q6L8H1 288 aa2.86□□□□□ -1.95
AGRN-203ENST00000461111 KRTAP4-11Q9BYQ6 195 aa2.86□□□□□ -1.95
AGRN-203ENST00000461111 MUC5ACP98088 5654 aa2.75□□□□□ -1.97
AGRN-203ENST00000461111 KRTAP20-2Q3LI61 65 aa2.67□□□□□ -1.98
AGRN-203ENST00000461111 KRTAP5-2Q701N4 177 aa2.62□□□□□ -1.99
AGRN-203ENST00000461111 KRTAP5-3Q6L8H2 238 aa2.58□□□□□ -2
AGRN-203ENST00000461111 AHNAK2Q8IVF2 5795 aa2.52□□□□□ -2.01
AGRN-203ENST00000461111 KRTAP5-10Q6L8G5 202 aa2.52□□□□□ -2.01
AGRN-203ENST00000461111 GPR98Q8WXG9 6306 aa2.5□□□□□ -2.01
AGRN-203ENST00000461111 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.02
AGRN-203ENST00000461111 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.02
AGRN-203ENST00000461111 KRTAP4-2Q9BYR5 136 aa2.36□□□□□ -2.03
AGRN-203ENST00000461111 KRTAP5-1Q6L8H4 278 aa2.3□□□□□ -2.04
AGRN-203ENST00000461111 KRTAP5-8O75690 187 aa2.24□□□□□ -2.05
AGRN-203ENST00000461111 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
AGRN-203ENST00000461111 KRTAP5-7Q6L8G8 165 aa2.18□□□□□ -2.06
AGRN-203ENST00000461111 KRTAP21-2Q3LI59 83 aa2.18□□□□□ -2.06
AGRN-203ENST00000461111 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
AGRN-203ENST00000461111 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
AGRN-203ENST00000461111 AHNAKQ09666 5890 aaKnown RBP1.91□□□□□ -2.1
AGRN-203ENST00000461111 KRTAP5-11Q6L8G4 156 aa1.89□□□□□ -2.11
AGRN-203ENST00000461111 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
AGRN-203ENST00000461111 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 59.1 ms