RNA–Protein interactions for RNA: ENST00000460658.5

SMTN-213, Transcript of smoothelin, humanhuman

TSL 5

Gene SMTN, Length 5,080 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-213ENST00000460658 HMCN2Q8NDA2 5059 aa4.42□□□□□ -1.7
SMTN-213ENST00000460658 MT1MQ8N339 61 aa4.4□□□□□ -1.71
SMTN-213ENST00000460658 FSIP2Q5CZC0 6907 aa4.36□□□□□ -1.71
SMTN-213ENST00000460658 KRTAP4-7Q9BYR0 210 aa4.33□□□□□ -1.72
SMTN-213ENST00000460658 FAT4Q6V0I7 4981 aa4.31□□□□□ -1.72
SMTN-213ENST00000460658 PRM1P04553 51 aa4.31□□□□□ -1.72
SMTN-213ENST00000460658 RNF213Q63HN8 5207 aa4.29□□□□□ -1.72
SMTN-213ENST00000460658 UBR4Q5T4S7 5183 aa4.28□□□□□ -1.72
SMTN-213ENST00000460658 LCE2DQ5TA82 110 aaPredicted RBP4.22□□□□□ -1.73
SMTN-213ENST00000460658 KRTAP19-7Q3SYF9 63 aa4.22□□□□□ -1.73
SMTN-213ENST00000460658 KRTAP2-3P0C7H8 128 aa4.21□□□□□ -1.74
SMTN-213ENST00000460658 KRTAP2-4Q9BYR9 128 aa4.21□□□□□ -1.74
SMTN-213ENST00000460658 KRTAP2-1Q9BYU5 128 aa4.21□□□□□ -1.74
SMTN-213ENST00000460658 MT1AP04731 61 aa4.19□□□□□ -1.74
SMTN-213ENST00000460658 LCE2AQ5TA79 106 aaPredicted RBP4.18□□□□□ -1.74
SMTN-213ENST00000460658 KRTAP9-2Q9BYQ4 174 aa4.16□□□□□ -1.74
SMTN-213ENST00000460658 KRTAP9-6A8MVA2 160 aa4.11□□□□□ -1.75
SMTN-213ENST00000460658 LOC100996750A0A140TA64 210 aa4.07□□□□□ -1.76
SMTN-213ENST00000460658 LCE1AQ5T7P2 110 aa4.03□□□□□ -1.76
SMTN-213ENST00000460658 KRTAP4-3Q9BYR4 195 aa4.02□□□□□ -1.77
SMTN-213ENST00000460658 LCE1BQ5T7P3 118 aa4.01□□□□□ -1.77
SMTN-213ENST00000460658 MT4P47944 62 aa3.98□□□□□ -1.77
SMTN-213ENST00000460658 KRTAP9-6A0A140TA67 174 aa3.95□□□□□ -1.78
SMTN-213ENST00000460658 LCE1DQ5T752 114 aa3.95□□□□□ -1.78
SMTN-213ENST00000460658 OBSCNQ5VST9 7968 aa3.86□□□□□ -1.79
SMTN-213ENST00000460658 LCE5AQ5TCM9 118 aa3.85□□□□□ -1.79
SMTN-213ENST00000460658 KRTAP6-3Q3LI67 103 aa3.82□□□□□ -1.8
SMTN-213ENST00000460658 KRTAP9-4Q9BYQ2 154 aa3.82□□□□□ -1.8
SMTN-213ENST00000460658 KMT2DO14686 5537 aa3.81□□□□□ -1.8
SMTN-213ENST00000460658 KRTAP4-9Q9BYQ8 210 aa3.79□□□□□ -1.8
SMTN-213ENST00000460658 KRTAP6-1Q3LI64 71 aa3.77□□□□□ -1.81
SMTN-213ENST00000460658 LCE4AQ5TA78 99 aa3.77□□□□□ -1.81
SMTN-213ENST00000460658 KRTAP20-1Q3LI63 56 aa3.75□□□□□ -1.81
SMTN-213ENST00000460658 KRTAP9-7A8MTY7 169 aa3.74□□□□□ -1.81
SMTN-213ENST00000460658 USH2AO75445 5202 aa3.72□□□□□ -1.81
SMTN-213ENST00000460658 KRTAP6-2Q3LI66 62 aa3.7□□□□□ -1.82
SMTN-213ENST00000460658 FCGBPQ9Y6R7 5405 aaPredicted RBP3.68□□□□□ -1.82
SMTN-213ENST00000460658 SYNE2Q8WXH0 6885 aaKnown RBP3.65□□□□□ -1.83
SMTN-213ENST00000460658 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.64□□□□□ -1.83
SMTN-213ENST00000460658 DSTQ03001 7570 aaKnown RBP3.61□□□□□ -1.83
SMTN-213ENST00000460658 KRTAP2-2Q9BYT5 123 aa3.56□□□□□ -1.84
SMTN-213ENST00000460658 MACF1Q9UPN3 7388 aaKnown RBP3.51□□□□□ -1.85
SMTN-213ENST00000460658 LCE1CQ5T751 118 aa3.49□□□□□ -1.85
SMTN-213ENST00000460658 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
SMTN-213ENST00000460658 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
SMTN-213ENST00000460658 MUC19Q7Z5P9 8384 aa3.45□□□□□ -1.86
SMTN-213ENST00000460658 SSPOA2VEC9 5147 aa3.41□□□□□ -1.86
SMTN-213ENST00000460658 MUC12Q9UKN1 5478 aa3.37□□□□□ -1.87
SMTN-213ENST00000460658 KRTAP5-9P26371 169 aa3.35□□□□□ -1.87
SMTN-213ENST00000460658 KRTAP5-5Q701N2 237 aaPredicted RBP3.2□□□□□ -1.9
SMTN-213ENST00000460658 MDN1Q9NU22 5596 aa3.19□□□□□ -1.9
SMTN-213ENST00000460658 NEBP20929 6669 aa3.16□□□□□ -1.9
SMTN-213ENST00000460658 GPR98Q8WXG9 6306 aa3.15□□□□□ -1.91
SMTN-213ENST00000460658 KRTAP9-9Q9BYP9 154 aa3.11□□□□□ -1.91
SMTN-213ENST00000460658 KRTAP20-2Q3LI61 65 aa3.09□□□□□ -1.92
SMTN-213ENST00000460658 KRTAP4-11Q9BYQ6 195 aa3.07□□□□□ -1.92
SMTN-213ENST00000460658 KRTAP4-6Q9BYQ5 205 aa3□□□□□ -1.93
SMTN-213ENST00000460658 KRTAP5-4Q6L8H1 288 aa2.95□□□□□ -1.94
SMTN-213ENST00000460658 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
SMTN-213ENST00000460658 KRTAP4-12Q9BQ66 201 aa2.58□□□□□ -2
SMTN-213ENST00000460658 KRTAP4-2Q9BYR5 136 aa2.58□□□□□ -2
SMTN-213ENST00000460658 KRTAP5-3Q6L8H2 238 aa2.58□□□□□ -2
SMTN-213ENST00000460658 AHNAK2Q8IVF2 5795 aa2.49□□□□□ -2.01
SMTN-213ENST00000460658 MUC5ACP98088 5654 aa2.48□□□□□ -2.01
SMTN-213ENST00000460658 KRTAP5-2Q701N4 177 aa2.44□□□□□ -2.02
SMTN-213ENST00000460658 HMCN1Q96RW7 5635 aa2.42□□□□□ -2.02
SMTN-213ENST00000460658 KRTAP5-10Q6L8G5 202 aa2.41□□□□□ -2.02
SMTN-213ENST00000460658 KRTAP5-8O75690 187 aa2.25□□□□□ -2.05
SMTN-213ENST00000460658 KRTAP5-1Q6L8H4 278 aa2.19□□□□□ -2.06
SMTN-213ENST00000460658 KRTAP5-11Q6L8G4 156 aa2.17□□□□□ -2.06
SMTN-213ENST00000460658 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
SMTN-213ENST00000460658 AHNAKQ09666 5890 aaKnown RBP2.1□□□□□ -2.07
SMTN-213ENST00000460658 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
SMTN-213ENST00000460658 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
SMTN-213ENST00000460658 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.02□□□□□ -2.09
SMTN-213ENST00000460658 PHGR1C9JFL3 82 aa1.97□□□□□ -2.09
SMTN-213ENST00000460658 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
SMTN-213ENST00000460658 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 126.2 ms