RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 CYP4F30PQ9H0H9 118 aa1.16□□□□□ -2.22
ECHDC1-211ENST00000460558 LOC110117498A0A087WWA1 95 aa1.14□□□□□ -2.23
ECHDC1-211ENST00000460558 TAX1BP3O14907 124 aa1.14□□□□□ -2.23
ECHDC1-211ENST00000460558 KRTAP6-1Q3LI64 71 aa1.14□□□□□ -2.23
ECHDC1-211ENST00000460558 SMIM20Q8N5G0 67 aa1.14□□□□□ -2.23
ECHDC1-211ENST00000460558 PRO1854Q9UHT4 67 aa1.14□□□□□ -2.23
ECHDC1-211ENST00000460558 MT1AP04731 61 aa1.13□□□□□ -2.23
ECHDC1-211ENST00000460558 COX6CP09669 75 aa1.13□□□□□ -2.23
ECHDC1-211ENST00000460558 CLLU1Q5K131 121 aa1.13□□□□□ -2.23
ECHDC1-211ENST00000460558 TP53AIP1Q9HCN2 124 aa1.13□□□□□ -2.23
ECHDC1-211ENST00000460558 TRAV22A0A0B4J277 110 aa1.12□□□□□ -2.23
ECHDC1-211ENST00000460558 JMJD7-PLA2G4BH0Y9G9 81 aa1.12□□□□□ -2.23
ECHDC1-211ENST00000460558 HIGD1BQ9P298 99 aa1.12□□□□□ -2.23
ECHDC1-211ENST00000460558 LOC101927531A0A1B0GV80 90 aa1.11□□□□□ -2.23
ECHDC1-211ENST00000460558 PHGR1C9JFL3 82 aa1.11□□□□□ -2.23
ECHDC1-211ENST00000460558 APOC3P02656 99 aa1.11□□□□□ -2.23
ECHDC1-211ENST00000460558 SVBPQ8N300 66 aa1.1□□□□□ -2.23
ECHDC1-211ENST00000460558 C14orf132Q9NPU4 83 aa1.1□□□□□ -2.23
ECHDC1-211ENST00000460558 ROMO1P60602 79 aa1.09□□□□□ -2.23
ECHDC1-211ENST00000460558 HIST1H2BKO60814 126 aa1.06□□□□□ -2.24
ECHDC1-211ENST00000460558 HIST1H2BJP06899 126 aa1.06□□□□□ -2.24
ECHDC1-211ENST00000460558 COX8AP10176 69 aa1.05□□□□□ -2.24
ECHDC1-211ENST00000460558 DLEU1O43261 78 aa1.04□□□□□ -2.24
ECHDC1-211ENST00000460558 INE1O15225 51 aa1.03□□□□□ -2.24
ECHDC1-211ENST00000460558 ATXN8Q156A1 80 aa1.03□□□□□ -2.24
ECHDC1-211ENST00000460558 K7ERJ3 54 aa1.02□□□□□ -2.25
ECHDC1-211ENST00000460558 VAMP8Q9BV40 100 aa1.02□□□□□ -2.25
ECHDC1-211ENST00000460558 SNURFQ9Y675 71 aa1.02□□□□□ -2.25
ECHDC1-211ENST00000460558 ATOX1O00244 68 aa1□□□□□ -2.25
ECHDC1-211ENST00000460558 TNP1P09430 55 aa1□□□□□ -2.25
ECHDC1-211ENST00000460558 C14orf144Q96I85 54 aa0.99□□□□□ -2.25
ECHDC1-211ENST00000460558 SPCS1Q9Y6A9 102 aa0.99□□□□□ -2.25
ECHDC1-211ENST00000460558 H0Y9P7 68 aa0.98□□□□□ -2.25
ECHDC1-211ENST00000460558 KRTAP21-2Q3LI59 83 aa0.98□□□□□ -2.25
ECHDC1-211ENST00000460558 TSTD3H0UI37 97 aa0.97□□□□□ -2.25
ECHDC1-211ENST00000460558 CDC42SE1Q9NRR8 79 aa0.97□□□□□ -2.25
ECHDC1-211ENST00000460558 SPTSSBQ8NFR3 76 aa0.96□□□□□ -2.26
ECHDC1-211ENST00000460558 DMAC1Q96GE9 116 aa0.96□□□□□ -2.26
ECHDC1-211ENST00000460558 LINC00208Q96KT6 92 aa0.96□□□□□ -2.26
ECHDC1-211ENST00000460558 UBL5Q9BZL1 73 aa0.96□□□□□ -2.26
ECHDC1-211ENST00000460558 UQCRQO14949 82 aa0.95□□□□□ -2.26
ECHDC1-211ENST00000460558 RPS28P62857 69 aaKnown RBP0.95□□□□□ -2.26
ECHDC1-211ENST00000460558 HSD52Q0P140 79 aa0.95□□□□□ -2.26
ECHDC1-211ENST00000460558 COX7CP15954 63 aa0.93□□□□□ -2.26
ECHDC1-211ENST00000460558 SPATA45Q537H7 98 aa0.93□□□□□ -2.26
ECHDC1-211ENST00000460558 F8W1H4 67 aa0.91□□□□□ -2.26
ECHDC1-211ENST00000460558 MIR22HGQ0VDD5 57 aa0.9□□□□□ -2.27
ECHDC1-211ENST00000460558 SCGB1A1P11684 91 aa0.88□□□□□ -2.27
ECHDC1-211ENST00000460558 CHKB-CPT1BH3BT56 60 aa0.87□□□□□ -2.27
ECHDC1-211ENST00000460558 ACYP2P14621 99 aa0.87□□□□□ -2.27
ECHDC1-211ENST00000460558 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
ECHDC1-211ENST00000460558 SPATA8Q6RVD6 105 aa0.86□□□□□ -2.27
ECHDC1-211ENST00000460558 LOC105371267A0A1B0GV96 52 aa0.85□□□□□ -2.27
ECHDC1-211ENST00000460558 S100A1P23297 94 aa0.84□□□□□ -2.27
ECHDC1-211ENST00000460558 BRK1Q8WUW1 75 aa0.84□□□□□ -2.27
ECHDC1-211ENST00000460558 UQCR10Q9UDW1 63 aa0.79□□□□□ -2.28
ECHDC1-211ENST00000460558 SERP1Q9Y6X1 66 aa0.79□□□□□ -2.28
ECHDC1-211ENST00000460558 M0R143 59 aa0.76□□□□□ -2.29
ECHDC1-211ENST00000460558 ATP5EP2Q5VTU8 51 aa0.74□□□□□ -2.29
ECHDC1-211ENST00000460558 H7BZZ5 65 aa0.72□□□□□ -2.29
ECHDC1-211ENST00000460558 SERP2Q8N6R1 65 aa0.7□□□□□ -2.3
ECHDC1-211ENST00000460558 PYY3Q5JQD4 70 aa0.68□□□□□ -2.3
ECHDC1-211ENST00000460558 PRR15LQ9BU68 103 aa0.64□□□□□ -2.31
ECHDC1-211ENST00000460558 J3QR89 54 aa0.63□□□□□ -2.31
ECHDC1-211ENST00000460558 A0A1B0GU69 56 aa0.62□□□□□ -2.31
ECHDC1-211ENST00000460558 CCDC179H3BU77 68 aa0.62□□□□□ -2.31
ECHDC1-211ENST00000460558 ETDBQ3ZM63 59 aa0.62□□□□□ -2.31
ECHDC1-211ENST00000460558 LINC00643Q86TS7 51 aa0.6□□□□□ -2.31
ECHDC1-211ENST00000460558 MUC16Q8WXI7 14507 aa0.59□□□□□ -2.32
ECHDC1-211ENST00000460558 K7ERU9 68 aa0.58□□□□□ -2.32
ECHDC1-211ENST00000460558 GTF2H5Q6ZYL4 71 aa0.53□□□□□ -2.32
ECHDC1-211ENST00000460558 UQCR11O14957 56 aa0.46□□□□□ -2.34
ECHDC1-211ENST00000460558 COL5A1-AS1Q5SY13 56 aa0.46□□□□□ -2.34
ECHDC1-211ENST00000460558 SMIM6P0DI80 62 aa0.42□□□□□ -2.34
ECHDC1-211ENST00000460558 A0A1B0GV90 55 aa0.37□□□□□ -2.35
ECHDC1-211ENST00000460558 LINC01558Q9Y6Z2 57 aa0.36□□□□□ -2.35
ECHDC1-211ENST00000460558 ATP5EP56381 51 aaPredicted RBP0.22□□□□□ -2.37
ECHDC1-211ENST00000460558 PRM1P04553 51 aa0.15□□□□□ -2.39
Retrieved 78 of 20,778 RNA–protein pairs in 173.6 ms