RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 KRTAP19-6Q3LI70 58 aa5.25□□□□□ -1.57
LMNB1-203ENST00000460265 SPRR2FQ96RM1 72 aa5.25□□□□□ -1.57
LMNB1-203ENST00000460265 KRTAP2-3P0C7H8 128 aa5.23□□□□□ -1.57
LMNB1-203ENST00000460265 KRTAP2-4Q9BYR9 128 aa5.23□□□□□ -1.57
LMNB1-203ENST00000460265 KRTAP2-1Q9BYU5 128 aa5.23□□□□□ -1.57
LMNB1-203ENST00000460265 SYNE1Q8NF91 8797 aaKnown RBP5.23□□□□□ -1.57
LMNB1-203ENST00000460265 KRTAP4-3Q9BYR4 195 aa5.22□□□□□ -1.57
LMNB1-203ENST00000460265 MT1GP13640 62 aa5.18□□□□□ -1.58
LMNB1-203ENST00000460265 LOC100996750A0A140TA64 210 aa5.16□□□□□ -1.58
LMNB1-203ENST00000460265 OBSCNQ5VST9 7968 aa5.14□□□□□ -1.59
LMNB1-203ENST00000460265 MACF1Q9UPN3 7388 aaKnown RBP5.08□□□□□ -1.6
LMNB1-203ENST00000460265 SYNE2Q8WXH0 6885 aaKnown RBP5.08□□□□□ -1.6
LMNB1-203ENST00000460265 KRTAP19-3Q7Z4W3 81 aa5.04□□□□□ -1.6
LMNB1-203ENST00000460265 LCE2DQ5TA82 110 aaPredicted RBP5.02□□□□□ -1.61
LMNB1-203ENST00000460265 KRTAP12-4P60329 112 aa5□□□□□ -1.61
LMNB1-203ENST00000460265 MT1MQ8N339 61 aa4.99□□□□□ -1.61
LMNB1-203ENST00000460265 KRTAP19-4Q3LI73 84 aa4.96□□□□□ -1.62
LMNB1-203ENST00000460265 KRTAP9-2Q9BYQ4 174 aa4.91□□□□□ -1.62
LMNB1-203ENST00000460265 MDN1Q9NU22 5596 aa4.86□□□□□ -1.63
LMNB1-203ENST00000460265 LCE3BQ5TA77 95 aa4.84□□□□□ -1.63
LMNB1-203ENST00000460265 SPRR2EP22531 72 aa4.77□□□□□ -1.65
LMNB1-203ENST00000460265 SPRR2BP35325 72 aa4.77□□□□□ -1.65
LMNB1-203ENST00000460265 SPRR2AP35326 72 aa4.77□□□□□ -1.65
LMNB1-203ENST00000460265 LCE5AQ5TCM9 118 aa4.75□□□□□ -1.65
LMNB1-203ENST00000460265 KRTAP4-9Q9BYQ8 210 aa4.66□□□□□ -1.66
LMNB1-203ENST00000460265 LCE1AQ5T7P2 110 aa4.59□□□□□ -1.67
LMNB1-203ENST00000460265 SPRR2DP22532 72 aa4.55□□□□□ -1.68
LMNB1-203ENST00000460265 KRTAP6-1Q3LI64 71 aa4.55□□□□□ -1.68
LMNB1-203ENST00000460265 PRM1P04553 51 aa4.49□□□□□ -1.69
LMNB1-203ENST00000460265 KRTAP9-7A8MTY7 169 aa4.43□□□□□ -1.7
LMNB1-203ENST00000460265 MT1AP04731 61 aa4.41□□□□□ -1.7
LMNB1-203ENST00000460265 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
LMNB1-203ENST00000460265 KRTAP5-9P26371 169 aa4.38□□□□□ -1.71
LMNB1-203ENST00000460265 LCE3EQ5T5B0 92 aa4.36□□□□□ -1.71
LMNB1-203ENST00000460265 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.34□□□□□ -1.71
LMNB1-203ENST00000460265 KRTAP9-6A0A140TA67 174 aa4.29□□□□□ -1.72
LMNB1-203ENST00000460265 KRTAP6-3Q3LI67 103 aa4.27□□□□□ -1.73
LMNB1-203ENST00000460265 KRTAP5-5Q701N2 237 aaPredicted RBP4.25□□□□□ -1.73
LMNB1-203ENST00000460265 KRTAP6-2Q3LI66 62 aa4.19□□□□□ -1.74
LMNB1-203ENST00000460265 MT4P47944 62 aa4.18□□□□□ -1.74
LMNB1-203ENST00000460265 KRTAP9-4Q9BYQ2 154 aa4.16□□□□□ -1.74
LMNB1-203ENST00000460265 MT3P25713 68 aa4.12□□□□□ -1.75
LMNB1-203ENST00000460265 KRTAP2-2Q9BYT5 123 aa4.12□□□□□ -1.75
LMNB1-203ENST00000460265 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
LMNB1-203ENST00000460265 KRTAP4-6Q9BYQ5 205 aa3.96□□□□□ -1.78
LMNB1-203ENST00000460265 NEBP20929 6669 aa3.95□□□□□ -1.78
LMNB1-203ENST00000460265 LCE1DQ5T752 114 aa3.78□□□□□ -1.8
LMNB1-203ENST00000460265 HMCN1Q96RW7 5635 aa3.71□□□□□ -1.81
LMNB1-203ENST00000460265 KRTAP20-2Q3LI61 65 aa3.7□□□□□ -1.82
LMNB1-203ENST00000460265 LCE4AQ5TA78 99 aa3.69□□□□□ -1.82
LMNB1-203ENST00000460265 LCE1BQ5T7P3 118 aa3.68□□□□□ -1.82
LMNB1-203ENST00000460265 KRTAP5-4Q6L8H1 288 aa3.68□□□□□ -1.82
LMNB1-203ENST00000460265 KRTAP20-1Q3LI63 56 aa3.62□□□□□ -1.83
LMNB1-203ENST00000460265 MUC5ACP98088 5654 aa3.46□□□□□ -1.86
LMNB1-203ENST00000460265 KRTAP5-2Q701N4 177 aa3.37□□□□□ -1.87
LMNB1-203ENST00000460265 KRTAP4-11Q9BYQ6 195 aa3.37□□□□□ -1.87
LMNB1-203ENST00000460265 KRTAP5-3Q6L8H2 238 aa3.34□□□□□ -1.87
LMNB1-203ENST00000460265 MUC19Q7Z5P9 8384 aa3.32□□□□□ -1.88
LMNB1-203ENST00000460265 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
LMNB1-203ENST00000460265 AHNAK2Q8IVF2 5795 aa3.06□□□□□ -1.92
LMNB1-203ENST00000460265 KRTAP4-2Q9BYR5 136 aa3.03□□□□□ -1.92
LMNB1-203ENST00000460265 KRTAP5-10Q6L8G5 202 aa3□□□□□ -1.93
LMNB1-203ENST00000460265 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
LMNB1-203ENST00000460265 KRTAP5-1Q6L8H4 278 aa2.99□□□□□ -1.93
LMNB1-203ENST00000460265 LCE1CQ5T751 118 aa2.98□□□□□ -1.93
LMNB1-203ENST00000460265 MUC5BQ9HC84 5762 aaPredicted RBP2.96□□□□□ -1.93
LMNB1-203ENST00000460265 KRTAP4-12Q9BQ66 201 aa2.92□□□□□ -1.94
LMNB1-203ENST00000460265 KRTAP5-8O75690 187 aa2.88□□□□□ -1.95
LMNB1-203ENST00000460265 GPR98Q8WXG9 6306 aa2.84□□□□□ -1.95
LMNB1-203ENST00000460265 KRTAP21-2Q3LI59 83 aa2.78□□□□□ -1.96
LMNB1-203ENST00000460265 KRTAP9-9Q9BYP9 154 aa2.74□□□□□ -1.97
LMNB1-203ENST00000460265 KRTAP21-1Q3LI58 79 aa2.73□□□□□ -1.97
LMNB1-203ENST00000460265 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.62□□□□□ -1.99
LMNB1-203ENST00000460265 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
LMNB1-203ENST00000460265 KRTAP5-7Q6L8G8 165 aa2.54□□□□□ -2
LMNB1-203ENST00000460265 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
LMNB1-203ENST00000460265 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
LMNB1-203ENST00000460265 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 189.1 ms