RNA–Protein interactions for RNA: ENST00000459737.5

KTN1-208, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 4,793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-208ENST00000459737 KRTAP10-12P60413 245 aa1.09□□□□□ -2.23
KTN1-208ENST00000459737 R4GN34 69 aa1.08□□□□□ -2.24
KTN1-208ENST00000459737 TNP1P09430 55 aa1.08□□□□□ -2.24
KTN1-208ENST00000459737 MT1HP80294 61 aa1.08□□□□□ -2.24
KTN1-208ENST00000459737 KRTAP9-6A8MVA2 160 aa1.07□□□□□ -2.24
KTN1-208ENST00000459737 SPINT4Q6UDR6 99 aa1.07□□□□□ -2.24
KTN1-208ENST00000459737 SMR3BP02814 79 aaPredicted RBP1.06□□□□□ -2.24
KTN1-208ENST00000459737 KRTAP5-11Q6L8G4 156 aa1.05□□□□□ -2.24
KTN1-208ENST00000459737 KRTAP5-5Q701N2 237 aaPredicted RBP1.04□□□□□ -2.24
KTN1-208ENST00000459737 KRTAP19-6Q3LI70 58 aa1.04□□□□□ -2.24
KTN1-208ENST00000459737 NDUFAF8A1L188 74 aa1.04□□□□□ -2.24
KTN1-208ENST00000459737 KRTAP10-5P60370 271 aa1.04□□□□□ -2.24
KTN1-208ENST00000459737 SPRR2GQ9BYE4 73 aa1.03□□□□□ -2.24
KTN1-208ENST00000459737 MT1XP80297 61 aa1.02□□□□□ -2.25
KTN1-208ENST00000459737 CRCT1Q9UGL9 99 aa1.02□□□□□ -2.25
KTN1-208ENST00000459737 MT1BP07438 61 aa1.01□□□□□ -2.25
KTN1-208ENST00000459737 LCE1EQ5T753 118 aa1.01□□□□□ -2.25
KTN1-208ENST00000459737 A0A0D9SG42 100 aa0.99□□□□□ -2.25
KTN1-208ENST00000459737 KRTAP5-4Q6L8H1 288 aa0.99□□□□□ -2.25
KTN1-208ENST00000459737 KRTAP2-3P0C7H8 128 aa0.99□□□□□ -2.25
KTN1-208ENST00000459737 KRTAP2-4Q9BYR9 128 aa0.99□□□□□ -2.25
KTN1-208ENST00000459737 KRTAP2-1Q9BYU5 128 aa0.99□□□□□ -2.25
KTN1-208ENST00000459737 MT1FP04733 61 aa0.99□□□□□ -2.25
KTN1-208ENST00000459737 KRTAP19-8Q3LI54 63 aa0.99□□□□□ -2.25
KTN1-208ENST00000459737 KRTAP8-1Q8IUC2 63 aa0.98□□□□□ -2.25
KTN1-208ENST00000459737 KRTAP5-8O75690 187 aa0.97□□□□□ -2.25
KTN1-208ENST00000459737 KRTAP5-1Q6L8H4 278 aa0.97□□□□□ -2.25
KTN1-208ENST00000459737 KRTAP19-5Q3LI72 72 aa0.97□□□□□ -2.25
KTN1-208ENST00000459737 KRTAP20-1Q3LI63 56 aa0.97□□□□□ -2.25
KTN1-208ENST00000459737 INE1O15225 51 aa0.96□□□□□ -2.26
KTN1-208ENST00000459737 MT2AP02795 61 aa0.95□□□□□ -2.26
KTN1-208ENST00000459737 KRTAP19-7Q3SYF9 63 aa0.95□□□□□ -2.26
KTN1-208ENST00000459737 LCE1AQ5T7P2 110 aa0.95□□□□□ -2.26
KTN1-208ENST00000459737 LCE3AQ5TA76 89 aa0.95□□□□□ -2.26
KTN1-208ENST00000459737 KRTAP6-3Q3LI67 103 aa0.95□□□□□ -2.26
KTN1-208ENST00000459737 KRTAP5-10Q6L8G5 202 aa0.95□□□□□ -2.26
KTN1-208ENST00000459737 KRTAP10-10P60014 251 aa0.94□□□□□ -2.26
KTN1-208ENST00000459737 KRTAP2-2Q9BYT5 123 aa0.93□□□□□ -2.26
KTN1-208ENST00000459737 KRTAP4-4Q9BYR3 166 aa0.93□□□□□ -2.26
KTN1-208ENST00000459737 AHNAK2Q8IVF2 5795 aa0.91□□□□□ -2.26
KTN1-208ENST00000459737 DSTQ03001 7570 aaKnown RBP0.9□□□□□ -2.27
KTN1-208ENST00000459737 MT3P25713 68 aa0.89□□□□□ -2.27
KTN1-208ENST00000459737 KRTAP5-7Q6L8G8 165 aa0.87□□□□□ -2.27
KTN1-208ENST00000459737 MUC5BQ9HC84 5762 aaPredicted RBP0.86□□□□□ -2.27
KTN1-208ENST00000459737 AHNAKQ09666 5890 aaKnown RBP0.86□□□□□ -2.27
KTN1-208ENST00000459737 LCE3CQ5T5A8 94 aa0.85□□□□□ -2.27
KTN1-208ENST00000459737 MT1LQ93083 61 aa0.84□□□□□ -2.28
KTN1-208ENST00000459737 KRTAP4-3Q9BYR4 195 aa0.84□□□□□ -2.28
KTN1-208ENST00000459737 MT1EP04732 61 aa0.83□□□□□ -2.28
KTN1-208ENST00000459737 MUC5ACP98088 5654 aa0.82□□□□□ -2.28
KTN1-208ENST00000459737 KRTAP12-3P60328 96 aa0.81□□□□□ -2.28
KTN1-208ENST00000459737 OBSCNQ5VST9 7968 aa0.79□□□□□ -2.28
KTN1-208ENST00000459737 SYNE1Q8NF91 8797 aaKnown RBP0.75□□□□□ -2.29
KTN1-208ENST00000459737 MT1MQ8N339 61 aa0.74□□□□□ -2.29
KTN1-208ENST00000459737 MT1GP13640 62 aa0.74□□□□□ -2.29
KTN1-208ENST00000459737 KRTAP6-1Q3LI64 71 aa0.73□□□□□ -2.29
KTN1-208ENST00000459737 MT1AP04731 61 aa0.73□□□□□ -2.29
KTN1-208ENST00000459737 KRTAP12-4P60329 112 aa0.71□□□□□ -2.3
KTN1-208ENST00000459737 KRTAP20-2Q3LI61 65 aa0.69□□□□□ -2.3
KTN1-208ENST00000459737 KRTAP19-3Q7Z4W3 81 aa0.69□□□□□ -2.3
KTN1-208ENST00000459737 SPRR2AP35326 72 aa0.68□□□□□ -2.3
KTN1-208ENST00000459737 SPRR2DP22532 72 aa0.67□□□□□ -2.3
KTN1-208ENST00000459737 SPRR2BP35325 72 aa0.67□□□□□ -2.3
KTN1-208ENST00000459737 SPRR2EP22531 72 aa0.66□□□□□ -2.3
KTN1-208ENST00000459737 MUC19Q7Z5P9 8384 aa0.66□□□□□ -2.3
KTN1-208ENST00000459737 SPRR2FQ96RM1 72 aa0.66□□□□□ -2.3
KTN1-208ENST00000459737 LCE1CQ5T751 118 aa0.65□□□□□ -2.31
KTN1-208ENST00000459737 LCE1BQ5T7P3 118 aa0.65□□□□□ -2.31
KTN1-208ENST00000459737 KRTAP6-2Q3LI66 62 aa0.65□□□□□ -2.31
KTN1-208ENST00000459737 LCE1FQ5T754 118 aa0.63□□□□□ -2.31
KTN1-208ENST00000459737 LCE3EQ5T5B0 92 aa0.63□□□□□ -2.31
KTN1-208ENST00000459737 PRM1P04553 51 aa0.62□□□□□ -2.31
KTN1-208ENST00000459737 LCE3DQ9BYE3 92 aa0.61□□□□□ -2.31
KTN1-208ENST00000459737 KRTAP21-2Q3LI59 83 aa0.56□□□□□ -2.32
KTN1-208ENST00000459737 MT4P47944 62 aa0.55□□□□□ -2.32
KTN1-208ENST00000459737 KRTAP21-1Q3LI58 79 aa0.55□□□□□ -2.32
KTN1-208ENST00000459737 PHGR1C9JFL3 82 aa0.49□□□□□ -2.33
KTN1-208ENST00000459737 MUC16Q8WXI7 14507 aa0.47□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 10.6 ms