RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 KRTAP6-3Q3LI67 103 aa3.31□□□□□ -1.88
HDAC3-202ENST00000459727 MDN1Q9NU22 5596 aa3.28□□□□□ -1.88
HDAC3-202ENST00000459727 KRTAP19-5Q3LI72 72 aa3.27□□□□□ -1.89
HDAC3-202ENST00000459727 LCE3CQ5T5A8 94 aa3.27□□□□□ -1.89
HDAC3-202ENST00000459727 KRTAP19-6Q3LI70 58 aa3.21□□□□□ -1.9
HDAC3-202ENST00000459727 KRTAP20-1Q3LI63 56 aa3.2□□□□□ -1.9
HDAC3-202ENST00000459727 KMT2DO14686 5537 aa3.18□□□□□ -1.9
HDAC3-202ENST00000459727 GPR98Q8WXG9 6306 aa3.16□□□□□ -1.9
HDAC3-202ENST00000459727 KRTAP19-7Q3SYF9 63 aa3.14□□□□□ -1.91
HDAC3-202ENST00000459727 KRTAP4-8A0A0G2JLE6 195 aa3.1□□□□□ -1.91
HDAC3-202ENST00000459727 KRTAP4-8Q9BYQ9 185 aa3.1□□□□□ -1.91
HDAC3-202ENST00000459727 MT1EP04732 61 aa3.09□□□□□ -1.91
HDAC3-202ENST00000459727 MT1LQ93083 61 aa3.08□□□□□ -1.92
HDAC3-202ENST00000459727 KRTAP5-9P26371 169 aa3.04□□□□□ -1.92
HDAC3-202ENST00000459727 KRTAP2-3P0C7H8 128 aa3.03□□□□□ -1.92
HDAC3-202ENST00000459727 KRTAP2-4Q9BYR9 128 aa3.03□□□□□ -1.92
HDAC3-202ENST00000459727 KRTAP2-1Q9BYU5 128 aa3.03□□□□□ -1.92
HDAC3-202ENST00000459727 KRTAP9-6A8MVA2 160 aa3□□□□□ -1.93
HDAC3-202ENST00000459727 MT1GP13640 62 aa2.95□□□□□ -1.94
HDAC3-202ENST00000459727 KRTAP19-3Q7Z4W3 81 aa2.92□□□□□ -1.94
HDAC3-202ENST00000459727 KRTAP9-4Q9BYQ2 154 aa2.92□□□□□ -1.94
HDAC3-202ENST00000459727 KRTAP4-7Q9BYR0 210 aa2.91□□□□□ -1.94
HDAC3-202ENST00000459727 KRTAP2-2Q9BYT5 123 aa2.91□□□□□ -1.94
HDAC3-202ENST00000459727 LCE4AQ5TA78 99 aa2.9□□□□□ -1.95
HDAC3-202ENST00000459727 MT1MQ8N339 61 aa2.88□□□□□ -1.95
HDAC3-202ENST00000459727 KRTAP9-9Q9BYP9 154 aa2.85□□□□□ -1.95
HDAC3-202ENST00000459727 DSTQ03001 7570 aaKnown RBP2.84□□□□□ -1.96
HDAC3-202ENST00000459727 LCE3BQ5TA77 95 aa2.82□□□□□ -1.96
HDAC3-202ENST00000459727 LCE5AQ5TCM9 118 aa2.82□□□□□ -1.96
HDAC3-202ENST00000459727 LCE1AQ5T7P2 110 aa2.77□□□□□ -1.97
HDAC3-202ENST00000459727 SPRR2FQ96RM1 72 aa2.77□□□□□ -1.97
HDAC3-202ENST00000459727 HMCN1Q96RW7 5635 aa2.76□□□□□ -1.97
HDAC3-202ENST00000459727 KRTAP4-12Q9BQ66 201 aa2.76□□□□□ -1.97
HDAC3-202ENST00000459727 SPRR2EP22531 72 aa2.75□□□□□ -1.97
HDAC3-202ENST00000459727 SPRR2BP35325 72 aa2.75□□□□□ -1.97
HDAC3-202ENST00000459727 SPRR2AP35326 72 aa2.75□□□□□ -1.97
HDAC3-202ENST00000459727 AHNAK2Q8IVF2 5795 aa2.74□□□□□ -1.97
HDAC3-202ENST00000459727 KRTAP4-3Q9BYR4 195 aa2.74□□□□□ -1.97
HDAC3-202ENST00000459727 MT1AP04731 61 aa2.67□□□□□ -1.98
HDAC3-202ENST00000459727 SPRR2DP22532 72 aa2.67□□□□□ -1.98
HDAC3-202ENST00000459727 LCE1DQ5T752 114 aa2.64□□□□□ -1.99
HDAC3-202ENST00000459727 KRTAP4-2Q9BYR5 136 aa2.64□□□□□ -1.99
HDAC3-202ENST00000459727 KRTAP12-4P60329 112 aa2.63□□□□□ -1.99
HDAC3-202ENST00000459727 KRTAP5-10Q6L8G5 202 aa2.62□□□□□ -1.99
HDAC3-202ENST00000459727 KRTAP5-3Q6L8H2 238 aa2.61□□□□□ -1.99
HDAC3-202ENST00000459727 KRTAP4-9Q9BYQ8 210 aa2.61□□□□□ -1.99
HDAC3-202ENST00000459727 KRTAP5-7Q6L8G8 165 aa2.57□□□□□ -2
HDAC3-202ENST00000459727 KRTAP5-5Q701N2 237 aaPredicted RBP2.56□□□□□ -2
HDAC3-202ENST00000459727 KRTAP6-1Q3LI64 71 aa2.55□□□□□ -2
HDAC3-202ENST00000459727 LCE3DQ9BYE3 92 aa2.52□□□□□ -2.01
HDAC3-202ENST00000459727 MT3P25713 68 aa2.51□□□□□ -2.01
HDAC3-202ENST00000459727 LCE3EQ5T5B0 92 aa2.51□□□□□ -2.01
HDAC3-202ENST00000459727 KRTAP4-11Q9BYQ6 195 aa2.47□□□□□ -2.01
HDAC3-202ENST00000459727 AHNAKQ09666 5890 aaKnown RBP2.44□□□□□ -2.02
HDAC3-202ENST00000459727 LCE1FQ5T754 118 aa2.38□□□□□ -2.03
HDAC3-202ENST00000459727 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
HDAC3-202ENST00000459727 KRTAP5-4Q6L8H1 288 aa2.37□□□□□ -2.03
HDAC3-202ENST00000459727 MT4P47944 62 aa2.36□□□□□ -2.03
HDAC3-202ENST00000459727 MUC5ACP98088 5654 aa2.33□□□□□ -2.04
HDAC3-202ENST00000459727 PRM1P04553 51 aa2.3□□□□□ -2.04
HDAC3-202ENST00000459727 KRTAP6-2Q3LI66 62 aa2.3□□□□□ -2.04
HDAC3-202ENST00000459727 SYNE1Q8NF91 8797 aaKnown RBP2.23□□□□□ -2.05
HDAC3-202ENST00000459727 KRTAP20-2Q3LI61 65 aa2.2□□□□□ -2.06
HDAC3-202ENST00000459727 KRTAP5-2Q701N4 177 aa2.15□□□□□ -2.07
HDAC3-202ENST00000459727 KRTAP5-8O75690 187 aa2.09□□□□□ -2.07
HDAC3-202ENST00000459727 OBSCNQ5VST9 7968 aa2.08□□□□□ -2.08
HDAC3-202ENST00000459727 LCE1EQ5T753 118 aa2.03□□□□□ -2.08
HDAC3-202ENST00000459727 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
HDAC3-202ENST00000459727 LCE1BQ5T7P3 118 aa1.87□□□□□ -2.11
HDAC3-202ENST00000459727 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
HDAC3-202ENST00000459727 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.86□□□□□ -2.11
HDAC3-202ENST00000459727 KRTAP5-11Q6L8G4 156 aa1.68□□□□□ -2.14
HDAC3-202ENST00000459727 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
HDAC3-202ENST00000459727 KRTAP4-4Q9BYR3 166 aa1.58□□□□□ -2.16
HDAC3-202ENST00000459727 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
HDAC3-202ENST00000459727 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
HDAC3-202ENST00000459727 MUC19Q7Z5P9 8384 aa1.33□□□□□ -2.2
HDAC3-202ENST00000459727 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 64.3 ms