RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 KRTAP19-4Q3LI73 84 aa5.57□□□□□ -1.52
LSS-205ENST00000457828 USH2AO75445 5202 aa5.52□□□□□ -1.53
LSS-205ENST00000457828 KRTAP19-3Q7Z4W3 81 aa5.49□□□□□ -1.53
LSS-205ENST00000457828 MT1EP04732 61 aa5.48□□□□□ -1.53
LSS-205ENST00000457828 KMT2DO14686 5537 aa5.47□□□□□ -1.53
LSS-205ENST00000457828 SYNE2Q8WXH0 6885 aaKnown RBP5.44□□□□□ -1.54
LSS-205ENST00000457828 MT1LQ93083 61 aa5.42□□□□□ -1.54
LSS-205ENST00000457828 KRTAP9-6A8MVA2 160 aa5.4□□□□□ -1.54
LSS-205ENST00000457828 OBSCNQ5VST9 7968 aa5.39□□□□□ -1.55
LSS-205ENST00000457828 KRTAP19-7Q3SYF9 63 aa5.37□□□□□ -1.55
LSS-205ENST00000457828 KRTAP9-7A8MTY7 169 aa5.37□□□□□ -1.55
LSS-205ENST00000457828 KRTAP12-4P60329 112 aa5.36□□□□□ -1.55
LSS-205ENST00000457828 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.31□□□□□ -1.56
LSS-205ENST00000457828 LOC100996750A0A140TA64 210 aa5.28□□□□□ -1.56
LSS-205ENST00000457828 LCE3BQ5TA77 95 aa5.27□□□□□ -1.57
LSS-205ENST00000457828 MT1MQ8N339 61 aa5.27□□□□□ -1.57
LSS-205ENST00000457828 KRTAP4-3Q9BYR4 195 aa5.26□□□□□ -1.57
LSS-205ENST00000457828 KRTAP2-3P0C7H8 128 aa5.23□□□□□ -1.57
LSS-205ENST00000457828 KRTAP2-4Q9BYR9 128 aa5.23□□□□□ -1.57
LSS-205ENST00000457828 KRTAP2-1Q9BYU5 128 aa5.23□□□□□ -1.57
LSS-205ENST00000457828 SSPOA2VEC9 5147 aa5.22□□□□□ -1.57
LSS-205ENST00000457828 FCGBPQ9Y6R7 5405 aaPredicted RBP5.2□□□□□ -1.58
LSS-205ENST00000457828 KRTAP6-3Q3LI67 103 aa5.2□□□□□ -1.58
LSS-205ENST00000457828 DSTQ03001 7570 aaKnown RBP5.18□□□□□ -1.58
LSS-205ENST00000457828 MACF1Q9UPN3 7388 aaKnown RBP5.16□□□□□ -1.58
LSS-205ENST00000457828 MT4P47944 62 aa5.13□□□□□ -1.59
LSS-205ENST00000457828 KRTAP20-1Q3LI63 56 aa5.02□□□□□ -1.61
LSS-205ENST00000457828 LCE1AQ5T7P2 110 aa5□□□□□ -1.61
LSS-205ENST00000457828 MUC12Q9UKN1 5478 aa4.96□□□□□ -1.62
LSS-205ENST00000457828 LCE3DQ9BYE3 92 aa4.94□□□□□ -1.62
LSS-205ENST00000457828 KRTAP4-9Q9BYQ8 210 aa4.93□□□□□ -1.62
LSS-205ENST00000457828 LCE5AQ5TCM9 118 aa4.91□□□□□ -1.62
LSS-205ENST00000457828 LCE3EQ5T5B0 92 aa4.87□□□□□ -1.63
LSS-205ENST00000457828 KRTAP2-2Q9BYT5 123 aa4.76□□□□□ -1.65
LSS-205ENST00000457828 MT3P25713 68 aa4.75□□□□□ -1.65
LSS-205ENST00000457828 PRM1P04553 51 aa4.73□□□□□ -1.65
LSS-205ENST00000457828 MT1AP04731 61 aa4.73□□□□□ -1.65
LSS-205ENST00000457828 MDN1Q9NU22 5596 aa4.73□□□□□ -1.65
LSS-205ENST00000457828 KRTAP5-9P26371 169 aa4.72□□□□□ -1.65
LSS-205ENST00000457828 NEBP20929 6669 aa4.66□□□□□ -1.66
LSS-205ENST00000457828 KRTAP6-1Q3LI64 71 aa4.63□□□□□ -1.67
LSS-205ENST00000457828 LCE1DQ5T752 114 aa4.58□□□□□ -1.68
LSS-205ENST00000457828 LCE4AQ5TA78 99 aa4.56□□□□□ -1.68
LSS-205ENST00000457828 LCE1BQ5T7P3 118 aa4.54□□□□□ -1.68
LSS-205ENST00000457828 KRTAP6-2Q3LI66 62 aa4.46□□□□□ -1.7
LSS-205ENST00000457828 KRTAP9-4Q9BYQ2 154 aa4.4□□□□□ -1.7
LSS-205ENST00000457828 GPR98Q8WXG9 6306 aa4.35□□□□□ -1.71
LSS-205ENST00000457828 KRTAP4-6Q9BYQ5 205 aa4.24□□□□□ -1.73
LSS-205ENST00000457828 MUC19Q7Z5P9 8384 aa4.17□□□□□ -1.74
LSS-205ENST00000457828 KRTAP5-5Q701N2 237 aaPredicted RBP4.11□□□□□ -1.75
LSS-205ENST00000457828 KRTAP20-2Q3LI61 65 aa4.08□□□□□ -1.76
LSS-205ENST00000457828 KRTAP9-9Q9BYP9 154 aa3.86□□□□□ -1.79
LSS-205ENST00000457828 KRTAP5-4Q6L8H1 288 aa3.83□□□□□ -1.8
LSS-205ENST00000457828 LCE1CQ5T751 118 aa3.8□□□□□ -1.8
LSS-205ENST00000457828 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
LSS-205ENST00000457828 LCE1FQ5T754 118 aa3.8□□□□□ -1.8
LSS-205ENST00000457828 KRTAP4-11Q9BYQ6 195 aa3.7□□□□□ -1.82
LSS-205ENST00000457828 HMCN1Q96RW7 5635 aa3.68□□□□□ -1.82
LSS-205ENST00000457828 MUC5ACP98088 5654 aa3.67□□□□□ -1.82
LSS-205ENST00000457828 KRTAP5-3Q6L8H2 238 aa3.6□□□□□ -1.83
LSS-205ENST00000457828 AHNAK2Q8IVF2 5795 aa3.48□□□□□ -1.85
LSS-205ENST00000457828 KRTAP4-12Q9BQ66 201 aa3.42□□□□□ -1.86
LSS-205ENST00000457828 KRTAP4-2Q9BYR5 136 aa3.42□□□□□ -1.86
LSS-205ENST00000457828 KRTAP5-2Q701N4 177 aa3.29□□□□□ -1.88
LSS-205ENST00000457828 KRTAP5-8O75690 187 aa3.27□□□□□ -1.89
LSS-205ENST00000457828 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
LSS-205ENST00000457828 KRTAP5-10Q6L8G5 202 aa3.09□□□□□ -1.91
LSS-205ENST00000457828 AHNAKQ09666 5890 aaKnown RBP2.97□□□□□ -1.93
LSS-205ENST00000457828 KRTAP5-1Q6L8H4 278 aa2.96□□□□□ -1.94
LSS-205ENST00000457828 MUC5BQ9HC84 5762 aaPredicted RBP2.87□□□□□ -1.95
LSS-205ENST00000457828 KRTAP5-7Q6L8G8 165 aa2.77□□□□□ -1.97
LSS-205ENST00000457828 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.98
LSS-205ENST00000457828 KRTAP5-11Q6L8G4 156 aa2.7□□□□□ -1.98
LSS-205ENST00000457828 PHGR1C9JFL3 82 aa2.63□□□□□ -1.99
LSS-205ENST00000457828 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
LSS-205ENST00000457828 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.49□□□□□ -2.01
LSS-205ENST00000457828 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 12.5 ms