RNA–Protein interactions for RNA: ENST00000456331.6

PPP1R9A-208, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 10,090 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-208ENST00000456331 KRTAP9-8Q9BYQ0 159 aa1.31□□□□□ -2.2
PPP1R9A-208ENST00000456331 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.31□□□□□ -2.2
PPP1R9A-208ENST00000456331 MACF1Q9UPN3 7388 aaKnown RBP1.31□□□□□ -2.2
PPP1R9A-208ENST00000456331 KRTAP9-3Q9BYQ3 159 aa1.28□□□□□ -2.2
PPP1R9A-208ENST00000456331 MT1MQ8N339 61 aa1.27□□□□□ -2.21
PPP1R9A-208ENST00000456331 TNXBP22105 4242 aa1.26□□□□□ -2.21
PPP1R9A-208ENST00000456331 MUC17Q685J3 4493 aa1.26□□□□□ -2.21
PPP1R9A-208ENST00000456331 GPR98Q8WXG9 6306 aa1.25□□□□□ -2.21
PPP1R9A-208ENST00000456331 MT1AP04731 61 aa1.25□□□□□ -2.21
PPP1R9A-208ENST00000456331 KRTAP20-1Q3LI63 56 aa1.25□□□□□ -2.21
PPP1R9A-208ENST00000456331 KRTAP19-6Q3LI70 58 aa1.24□□□□□ -2.21
PPP1R9A-208ENST00000456331 NEBP20929 6669 aa1.23□□□□□ -2.21
PPP1R9A-208ENST00000456331 KRTAP19-2Q3LHN2 52 aa1.23□□□□□ -2.21
PPP1R9A-208ENST00000456331 MUC2Q02817 5179 aa1.21□□□□□ -2.22
PPP1R9A-208ENST00000456331 LCE1AQ5T7P2 110 aa1.21□□□□□ -2.22
PPP1R9A-208ENST00000456331 PRM1P04553 51 aa1.2□□□□□ -2.22
PPP1R9A-208ENST00000456331 SYNE1Q8NF91 8797 aaKnown RBP1.2□□□□□ -2.22
PPP1R9A-208ENST00000456331 KMT2DO14686 5537 aa1.2□□□□□ -2.22
PPP1R9A-208ENST00000456331 KRTAP2-3P0C7H8 128 aa1.2□□□□□ -2.22
PPP1R9A-208ENST00000456331 KRTAP2-4Q9BYR9 128 aa1.2□□□□□ -2.22
PPP1R9A-208ENST00000456331 KRTAP2-1Q9BYU5 128 aa1.2□□□□□ -2.22
PPP1R9A-208ENST00000456331 OBSCNQ5VST9 7968 aa1.18□□□□□ -2.22
PPP1R9A-208ENST00000456331 KRTAP4-8A0A0G2JLE6 195 aa1.18□□□□□ -2.22
PPP1R9A-208ENST00000456331 KRTAP4-8Q9BYQ9 185 aa1.18□□□□□ -2.22
PPP1R9A-208ENST00000456331 MDN1Q9NU22 5596 aa1.16□□□□□ -2.22
PPP1R9A-208ENST00000456331 DSTQ03001 7570 aaKnown RBP1.16□□□□□ -2.22
PPP1R9A-208ENST00000456331 USH2AO75445 5202 aa1.16□□□□□ -2.22
PPP1R9A-208ENST00000456331 HMCN1Q96RW7 5635 aa1.15□□□□□ -2.22
PPP1R9A-208ENST00000456331 LCE4AQ5TA78 99 aa1.15□□□□□ -2.23
PPP1R9A-208ENST00000456331 MUC5BQ9HC84 5762 aaPredicted RBP1.14□□□□□ -2.23
PPP1R9A-208ENST00000456331 KRTAP6-3Q3LI67 103 aa1.14□□□□□ -2.23
PPP1R9A-208ENST00000456331 SSPOA2VEC9 5147 aa1.13□□□□□ -2.23
PPP1R9A-208ENST00000456331 KRTAP19-7Q3SYF9 63 aa1.11□□□□□ -2.23
PPP1R9A-208ENST00000456331 LCE1DQ5T752 114 aa1.1□□□□□ -2.23
PPP1R9A-208ENST00000456331 KRTAP9-4Q9BYQ2 154 aa1.1□□□□□ -2.23
PPP1R9A-208ENST00000456331 KRTAP4-9Q9BYQ8 210 aa1.09□□□□□ -2.23
PPP1R9A-208ENST00000456331 LCE1BQ5T7P3 118 aa1.09□□□□□ -2.23
PPP1R9A-208ENST00000456331 KRTAP2-2Q9BYT5 123 aa1.08□□□□□ -2.24
PPP1R9A-208ENST00000456331 MT4P47944 62 aa1.08□□□□□ -2.24
PPP1R9A-208ENST00000456331 MUC12Q9UKN1 5478 aa1.07□□□□□ -2.24
PPP1R9A-208ENST00000456331 FCGBPQ9Y6R7 5405 aaPredicted RBP1.07□□□□□ -2.24
PPP1R9A-208ENST00000456331 KRTAP4-7Q9BYR0 210 aa1.07□□□□□ -2.24
PPP1R9A-208ENST00000456331 AHNAKQ09666 5890 aaKnown RBP1.07□□□□□ -2.24
PPP1R9A-208ENST00000456331 LCE5AQ5TCM9 118 aa1.06□□□□□ -2.24
PPP1R9A-208ENST00000456331 KRTAP6-2Q3LI66 62 aa1.05□□□□□ -2.24
PPP1R9A-208ENST00000456331 AHNAK2Q8IVF2 5795 aa1.03□□□□□ -2.24
PPP1R9A-208ENST00000456331 LOC100996750A0A140TA64 210 aa1.03□□□□□ -2.25
PPP1R9A-208ENST00000456331 KRTAP6-1Q3LI64 71 aa1□□□□□ -2.25
PPP1R9A-208ENST00000456331 KRTAP4-3Q9BYR4 195 aa0.98□□□□□ -2.25
PPP1R9A-208ENST00000456331 KRTAP5-9P26371 169 aa0.98□□□□□ -2.25
PPP1R9A-208ENST00000456331 KRTAP9-9Q9BYP9 154 aa0.96□□□□□ -2.26
PPP1R9A-208ENST00000456331 LCE1CQ5T751 118 aa0.95□□□□□ -2.26
PPP1R9A-208ENST00000456331 LCE1EQ5T753 118 aa0.95□□□□□ -2.26
PPP1R9A-208ENST00000456331 LCE1FQ5T754 118 aa0.95□□□□□ -2.26
PPP1R9A-208ENST00000456331 KRTAP4-12Q9BQ66 201 aa0.95□□□□□ -2.26
PPP1R9A-208ENST00000456331 KRTAP9-6A8MVA2 160 aa0.95□□□□□ -2.26
PPP1R9A-208ENST00000456331 KRTAP4-6Q9BYQ5 205 aa0.91□□□□□ -2.26
PPP1R9A-208ENST00000456331 MUC5ACP98088 5654 aa0.89□□□□□ -2.27
PPP1R9A-208ENST00000456331 KRTAP5-2Q701N4 177 aa0.88□□□□□ -2.27
PPP1R9A-208ENST00000456331 KRTAP5-5Q701N2 237 aaPredicted RBP0.87□□□□□ -2.27
PPP1R9A-208ENST00000456331 KRTAP5-3Q6L8H2 238 aa0.86□□□□□ -2.27
PPP1R9A-208ENST00000456331 KRTAP5-4Q6L8H1 288 aa0.85□□□□□ -2.27
PPP1R9A-208ENST00000456331 KRTAP4-11Q9BYQ6 195 aa0.84□□□□□ -2.28
PPP1R9A-208ENST00000456331 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.84□□□□□ -2.28
PPP1R9A-208ENST00000456331 KRTAP20-2Q3LI61 65 aa0.83□□□□□ -2.28
PPP1R9A-208ENST00000456331 KRTAP4-4Q9BYR3 166 aa0.83□□□□□ -2.28
PPP1R9A-208ENST00000456331 MUC19Q7Z5P9 8384 aa0.82□□□□□ -2.28
PPP1R9A-208ENST00000456331 KRTAP5-10Q6L8G5 202 aa0.8□□□□□ -2.28
PPP1R9A-208ENST00000456331 KRTAP5-8O75690 187 aa0.79□□□□□ -2.28
PPP1R9A-208ENST00000456331 KRTAP5-7Q6L8G8 165 aa0.78□□□□□ -2.28
PPP1R9A-208ENST00000456331 KRTAP4-2Q9BYR5 136 aa0.76□□□□□ -2.29
PPP1R9A-208ENST00000456331 KRTAP5-1Q6L8H4 278 aa0.73□□□□□ -2.29
PPP1R9A-208ENST00000456331 KRTAP5-11Q6L8G4 156 aa0.7□□□□□ -2.3
PPP1R9A-208ENST00000456331 PHGR1C9JFL3 82 aa0.65□□□□□ -2.31
PPP1R9A-208ENST00000456331 KRTAP21-1Q3LI58 79 aa0.6□□□□□ -2.31
PPP1R9A-208ENST00000456331 KRTAP21-2Q3LI59 83 aa0.56□□□□□ -2.32
PPP1R9A-208ENST00000456331 MUC16Q8WXI7 14507 aa0.54□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 73.2 ms