RNA–Protein interactions for RNA: ENST00000454269.5

HCG18-240, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,430 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-240ENST00000454269 M0R2T5 61 aa3.32□□□□□ -1.88
HCG18-240ENST00000454269 KRTAP8-1Q8IUC2 63 aa3.29□□□□□ -1.88
HCG18-240ENST00000454269 LCE3AQ5TA76 89 aa3.28□□□□□ -1.89
HCG18-240ENST00000454269 KRTAP2-3P0C7H8 128 aa3.24□□□□□ -1.89
HCG18-240ENST00000454269 KRTAP2-4Q9BYR9 128 aa3.24□□□□□ -1.89
HCG18-240ENST00000454269 KRTAP2-1Q9BYU5 128 aa3.24□□□□□ -1.89
HCG18-240ENST00000454269 FCGBPQ9Y6R7 5405 aaPredicted RBP3.24□□□□□ -1.89
HCG18-240ENST00000454269 KRTAP6-3Q3LI67 103 aa3.23□□□□□ -1.89
HCG18-240ENST00000454269 MT2AP02795 61 aa3.21□□□□□ -1.9
HCG18-240ENST00000454269 MT1FP04733 61 aa3.21□□□□□ -1.9
HCG18-240ENST00000454269 LCE3CQ5T5A8 94 aa3.18□□□□□ -1.9
HCG18-240ENST00000454269 KRTAP10-5P60370 271 aa3.17□□□□□ -1.9
HCG18-240ENST00000454269 MACF1Q9UPN3 7388 aaKnown RBP3.14□□□□□ -1.91
HCG18-240ENST00000454269 SYNE2Q8WXH0 6885 aaKnown RBP3.14□□□□□ -1.91
HCG18-240ENST00000454269 KRTAP12-3P60328 96 aa3.11□□□□□ -1.91
HCG18-240ENST00000454269 KRTAP12-4P60329 112 aa3.09□□□□□ -1.91
HCG18-240ENST00000454269 SPRR2GQ9BYE4 73 aa3.08□□□□□ -1.92
HCG18-240ENST00000454269 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
HCG18-240ENST00000454269 KRTAP10-7P60409 375 aaPredicted RBP3.03□□□□□ -1.92
HCG18-240ENST00000454269 KRTAP19-6Q3LI70 58 aa3□□□□□ -1.93
HCG18-240ENST00000454269 MUC12Q9UKN1 5478 aa2.99□□□□□ -1.93
HCG18-240ENST00000454269 KRTAP19-8Q3LI54 63 aa2.98□□□□□ -1.93
HCG18-240ENST00000454269 MT1BP07438 61 aa2.96□□□□□ -1.94
HCG18-240ENST00000454269 KMT2DO14686 5537 aa2.95□□□□□ -1.94
HCG18-240ENST00000454269 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
HCG18-240ENST00000454269 KRTAP9-6A8MVA2 160 aa2.92□□□□□ -1.94
HCG18-240ENST00000454269 MT1XP80297 61 aa2.9□□□□□ -1.95
HCG18-240ENST00000454269 MDN1Q9NU22 5596 aa2.88□□□□□ -1.95
HCG18-240ENST00000454269 KRTAP19-5Q3LI72 72 aa2.83□□□□□ -1.96
HCG18-240ENST00000454269 NEBP20929 6669 aa2.82□□□□□ -1.96
HCG18-240ENST00000454269 PRM1P04553 51 aa2.74□□□□□ -1.97
HCG18-240ENST00000454269 KRTAP5-9P26371 169 aa2.73□□□□□ -1.97
HCG18-240ENST00000454269 HMCN1Q96RW7 5635 aa2.72□□□□□ -1.97
HCG18-240ENST00000454269 KRTAP20-1Q3LI63 56 aa2.7□□□□□ -1.98
HCG18-240ENST00000454269 SPRR2FQ96RM1 72 aa2.68□□□□□ -1.98
HCG18-240ENST00000454269 SPRR2EP22531 72 aa2.64□□□□□ -1.99
HCG18-240ENST00000454269 SPRR2BP35325 72 aa2.64□□□□□ -1.99
HCG18-240ENST00000454269 SPRR2AP35326 72 aa2.64□□□□□ -1.99
HCG18-240ENST00000454269 KRTAP5-5Q701N2 237 aaPredicted RBP2.61□□□□□ -1.99
HCG18-240ENST00000454269 KRTAP19-7Q3SYF9 63 aa2.59□□□□□ -1.99
HCG18-240ENST00000454269 DSTQ03001 7570 aaKnown RBP2.58□□□□□ -2
HCG18-240ENST00000454269 LCE3DQ9BYE3 92 aa2.57□□□□□ -2
HCG18-240ENST00000454269 SPRR2DP22532 72 aa2.54□□□□□ -2
HCG18-240ENST00000454269 SYNE1Q8NF91 8797 aaKnown RBP2.53□□□□□ -2.01
HCG18-240ENST00000454269 MT1AP04731 61 aa2.52□□□□□ -2.01
HCG18-240ENST00000454269 MT1EP04732 61 aa2.52□□□□□ -2.01
HCG18-240ENST00000454269 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
HCG18-240ENST00000454269 MT1LQ93083 61 aa2.49□□□□□ -2.01
HCG18-240ENST00000454269 KRTAP5-11Q6L8G4 156 aa2.46□□□□□ -2.02
HCG18-240ENST00000454269 KRTAP4-3Q9BYR4 195 aa2.39□□□□□ -2.03
HCG18-240ENST00000454269 KRTAP6-2Q3LI66 62 aa2.38□□□□□ -2.03
HCG18-240ENST00000454269 KRTAP19-3Q7Z4W3 81 aa2.37□□□□□ -2.03
HCG18-240ENST00000454269 MT1MQ8N339 61 aa2.36□□□□□ -2.03
HCG18-240ENST00000454269 MT1GP13640 62 aa2.34□□□□□ -2.03
HCG18-240ENST00000454269 MT4P47944 62 aa2.3□□□□□ -2.04
HCG18-240ENST00000454269 GPR98Q8WXG9 6306 aa2.3□□□□□ -2.04
HCG18-240ENST00000454269 AHNAK2Q8IVF2 5795 aa2.22□□□□□ -2.05
HCG18-240ENST00000454269 OBSCNQ5VST9 7968 aa2.18□□□□□ -2.06
HCG18-240ENST00000454269 KRTAP5-4Q6L8H1 288 aa2.18□□□□□ -2.06
HCG18-240ENST00000454269 KRTAP5-10Q6L8G5 202 aa2.16□□□□□ -2.06
HCG18-240ENST00000454269 KRTAP5-1Q6L8H4 278 aa2.13□□□□□ -2.07
HCG18-240ENST00000454269 KRTAP6-1Q3LI64 71 aa2.12□□□□□ -2.07
HCG18-240ENST00000454269 KRTAP20-2Q3LI61 65 aa2.09□□□□□ -2.08
HCG18-240ENST00000454269 LCE1CQ5T751 118 aa2.04□□□□□ -2.08
HCG18-240ENST00000454269 LCE1BQ5T7P3 118 aa2.04□□□□□ -2.08
HCG18-240ENST00000454269 KRTAP4-4Q9BYR3 166 aa2.04□□□□□ -2.08
HCG18-240ENST00000454269 KRTAP5-7Q6L8G8 165 aa2.02□□□□□ -2.09
HCG18-240ENST00000454269 MUC5BQ9HC84 5762 aaPredicted RBP2.02□□□□□ -2.09
HCG18-240ENST00000454269 KRTAP5-2Q701N4 177 aa1.9□□□□□ -2.1
HCG18-240ENST00000454269 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
HCG18-240ENST00000454269 MUC19Q7Z5P9 8384 aa1.89□□□□□ -2.11
HCG18-240ENST00000454269 KRTAP5-8O75690 187 aa1.87□□□□□ -2.11
HCG18-240ENST00000454269 MUC5ACP98088 5654 aa1.82□□□□□ -2.12
HCG18-240ENST00000454269 AHNAKQ09666 5890 aaKnown RBP1.8□□□□□ -2.12
HCG18-240ENST00000454269 KRTAP21-2Q3LI59 83 aa1.38□□□□□ -2.19
HCG18-240ENST00000454269 PHGR1C9JFL3 82 aa1.25□□□□□ -2.21
HCG18-240ENST00000454269 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 26.6 ms