RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 KRTAP19-2Q3LHN2 52 aa0.68□□□□□ -2.3
HMGB1P26-201ENST00000452520 KRTAP19-6Q3LI70 58 aa0.68□□□□□ -2.3
HMGB1P26-201ENST00000452520 DEFB105AQ8NG35 78 aa0.68□□□□□ -2.3
HMGB1P26-201ENST00000452520 MRPL34Q9BQ48 92 aaKnown RBP0.68□□□□□ -2.3
HMGB1P26-201ENST00000452520 K7EMI3 77 aa0.67□□□□□ -2.3
HMGB1P26-201ENST00000452520 NDUFB1O75438 58 aa0.67□□□□□ -2.3
HMGB1P26-201ENST00000452520 SPRR2DP22532 72 aa0.67□□□□□ -2.3
HMGB1P26-201ENST00000452520 FLGP20930 4061 aaPredicted RBP0.66□□□□□ -2.3
HMGB1P26-201ENST00000452520 SMIM27A0A1W2PRY6 76 aa0.66□□□□□ -2.3
HMGB1P26-201ENST00000452520 LINC01546A6NGU7 62 aa0.66□□□□□ -2.3
HMGB1P26-201ENST00000452520 A8MTW9 85 aa0.66□□□□□ -2.3
HMGB1P26-201ENST00000452520 MT2AP02795 61 aa0.66□□□□□ -2.3
HMGB1P26-201ENST00000452520 MT1FP04733 61 aa0.66□□□□□ -2.3
HMGB1P26-201ENST00000452520 C3orf79P0CE67 100 aa0.66□□□□□ -2.3
HMGB1P26-201ENST00000452520 SMIM13P0DJ93 91 aa0.66□□□□□ -2.3
HMGB1P26-201ENST00000452520 ATP5EP2Q5VTU8 51 aa0.66□□□□□ -2.3
HMGB1P26-201ENST00000452520 IAPPP10997 89 aa0.65□□□□□ -2.31
HMGB1P26-201ENST00000452520 PLNP26678 52 aa0.65□□□□□ -2.31
HMGB1P26-201ENST00000452520 SPRR2FQ96RM1 72 aa0.65□□□□□ -2.31
HMGB1P26-201ENST00000452520 MDN1Q9NU22 5596 aa0.65□□□□□ -2.31
HMGB1P26-201ENST00000452520 ATXN8Q156A1 80 aa0.64□□□□□ -2.31
HMGB1P26-201ENST00000452520 TMEM167BQ9NRX6 74 aa0.64□□□□□ -2.31
HMGB1P26-201ENST00000452520 GNG13Q9P2W3 67 aa0.64□□□□□ -2.31
HMGB1P26-201ENST00000452520 IFI27P40305 119 aaPredicted RBP0.63□□□□□ -2.31
HMGB1P26-201ENST00000452520 MT4P47944 62 aa0.63□□□□□ -2.31
HMGB1P26-201ENST00000452520 SYNE1Q8NF91 8797 aaKnown RBP0.62□□□□□ -2.31
HMGB1P26-201ENST00000452520 H3BVH4 76 aa0.62□□□□□ -2.31
HMGB1P26-201ENST00000452520 FCER1GP30273 86 aa0.62□□□□□ -2.31
HMGB1P26-201ENST00000452520 H1FX-AS1Q4G0G2 97 aa0.62□□□□□ -2.31
HMGB1P26-201ENST00000452520 AHNAK2Q8IVF2 5795 aa0.62□□□□□ -2.31
HMGB1P26-201ENST00000452520 MUC5BQ9HC84 5762 aaPredicted RBP0.61□□□□□ -2.31
HMGB1P26-201ENST00000452520 H0YGX0 51 aa0.61□□□□□ -2.31
HMGB1P26-201ENST00000452520 CRIP1P50238 77 aa0.61□□□□□ -2.31
HMGB1P26-201ENST00000452520 PRLHP81277 87 aa0.61□□□□□ -2.31
HMGB1P26-201ENST00000452520 NDUFA1O15239 70 aa0.6□□□□□ -2.31
HMGB1P26-201ENST00000452520 SMIM2Q9BVW6 85 aa0.6□□□□□ -2.31
HMGB1P26-201ENST00000452520 UBL5Q9BZL1 73 aa0.6□□□□□ -2.31
HMGB1P26-201ENST00000452520 IGIPA6NJ69 53 aa0.59□□□□□ -2.31
HMGB1P26-201ENST00000452520 KRTAP8-1Q8IUC2 63 aa0.59□□□□□ -2.31
HMGB1P26-201ENST00000452520 TOMM7Q9P0U1 55 aa0.59□□□□□ -2.31
HMGB1P26-201ENST00000452520 C6orf48Q9UBA6 75 aa0.59□□□□□ -2.31
HMGB1P26-201ENST00000452520 POLR2KP53803 58 aaKnown RBP0.58□□□□□ -2.32
HMGB1P26-201ENST00000452520 AHNAKQ09666 5890 aaKnown RBP0.57□□□□□ -2.32
HMGB1P26-201ENST00000452520 KCNQ1DNQ9H478 68 aa0.57□□□□□ -2.32
HMGB1P26-201ENST00000452520 ETDCA0A1B0GVM5 59 aa0.56□□□□□ -2.32
HMGB1P26-201ENST00000452520 M0QY20 66 aa0.56□□□□□ -2.32
HMGB1P26-201ENST00000452520 NREPQ16612 68 aa0.56□□□□□ -2.32
HMGB1P26-201ENST00000452520 LINC00308Q8TCZ7 52 aa0.56□□□□□ -2.32
HMGB1P26-201ENST00000452520 RPL39LQ96EH5 51 aaKnown RBP0.56□□□□□ -2.32
HMGB1P26-201ENST00000452520 MT1BP07438 61 aa0.55□□□□□ -2.32
HMGB1P26-201ENST00000452520 RPL39P62891 51 aaKnown RBP0.55□□□□□ -2.32
HMGB1P26-201ENST00000452520 CDKN2A-AS1Q9UH64 79 aa0.55□□□□□ -2.32
HMGB1P26-201ENST00000452520 IGLV5-48A0A075B6I7 105 aa0.54□□□□□ -2.32
HMGB1P26-201ENST00000452520 PHGR1C9JFL3 82 aa0.53□□□□□ -2.32
HMGB1P26-201ENST00000452520 RPS29P62273 56 aaKnown RBP0.53□□□□□ -2.32
HMGB1P26-201ENST00000452520 LINC00158P58513 81 aa0.52□□□□□ -2.33
HMGB1P26-201ENST00000452520 KRTAP19-8Q3LI54 63 aa0.5□□□□□ -2.33
HMGB1P26-201ENST00000452520 WFDC13Q8IUB5 93 aa0.5□□□□□ -2.33
HMGB1P26-201ENST00000452520 H0YAA0 97 aa0.49□□□□□ -2.33
HMGB1P26-201ENST00000452520 MUC5ACP98088 5654 aa0.49□□□□□ -2.33
HMGB1P26-201ENST00000452520 MMP24-AS1A0A0U1RRL7 71 aa0.48□□□□□ -2.33
HMGB1P26-201ENST00000452520 KRTAP20-2Q3LI61 65 aa0.48□□□□□ -2.33
HMGB1P26-201ENST00000452520 MT1XP80297 61 aa0.47□□□□□ -2.33
HMGB1P26-201ENST00000452520 SPRR2GQ9BYE4 73 aa0.47□□□□□ -2.33
HMGB1P26-201ENST00000452520 PRM1P04553 51 aa0.46□□□□□ -2.34
HMGB1P26-201ENST00000452520 MT1GP13640 62 aa0.44□□□□□ -2.34
HMGB1P26-201ENST00000452520 S4R3F8 94 aa0.44□□□□□ -2.34
HMGB1P26-201ENST00000452520 M0QZ58 72 aa0.43□□□□□ -2.34
HMGB1P26-201ENST00000452520 MT1MQ8N339 61 aa0.43□□□□□ -2.34
HMGB1P26-201ENST00000452520 MT1EP04732 61 aa0.42□□□□□ -2.34
HMGB1P26-201ENST00000452520 KRTAP19-5Q3LI72 72 aa0.41□□□□□ -2.34
HMGB1P26-201ENST00000452520 KRTAP19-7Q3SYF9 63 aa0.41□□□□□ -2.34
HMGB1P26-201ENST00000452520 KRTAP6-2Q3LI66 62 aa0.38□□□□□ -2.35
HMGB1P26-201ENST00000452520 MT1LQ93083 61 aa0.38□□□□□ -2.35
HMGB1P26-201ENST00000452520 TNP1P09430 55 aa0.37□□□□□ -2.35
HMGB1P26-201ENST00000452520 KRTAP6-1Q3LI64 71 aa0.36□□□□□ -2.35
HMGB1P26-201ENST00000452520 MT1AP04731 61 aa0.32□□□□□ -2.36
Retrieved 77 of 20,778 RNA–protein pairs in 107.4 ms