RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 KRTAP4-8A0A0G2JLE6 195 aa4.08□□□□□ -1.76
PKP4-206ENST00000452162 KRTAP5-9P26371 169 aa4.08□□□□□ -1.76
PKP4-206ENST00000452162 KRTAP4-8Q9BYQ9 185 aa4.08□□□□□ -1.76
PKP4-206ENST00000452162 INE1O15225 51 aa4.06□□□□□ -1.76
PKP4-206ENST00000452162 SPRR2FQ96RM1 72 aa4.02□□□□□ -1.77
PKP4-206ENST00000452162 KRTAP19-5Q3LI72 72 aa3.99□□□□□ -1.77
PKP4-206ENST00000452162 MDN1Q9NU22 5596 aa3.98□□□□□ -1.77
PKP4-206ENST00000452162 NEBP20929 6669 aa3.97□□□□□ -1.77
PKP4-206ENST00000452162 KRTAP19-4Q3LI73 84 aa3.97□□□□□ -1.77
PKP4-206ENST00000452162 SPRR2EP22531 72 aa3.9□□□□□ -1.78
PKP4-206ENST00000452162 SPRR2BP35325 72 aa3.9□□□□□ -1.78
PKP4-206ENST00000452162 SPRR2AP35326 72 aa3.9□□□□□ -1.78
PKP4-206ENST00000452162 KRTAP19-7Q3SYF9 63 aa3.89□□□□□ -1.79
PKP4-206ENST00000452162 LCE1AQ5T7P2 110 aa3.89□□□□□ -1.79
PKP4-206ENST00000452162 KRTAP4-12Q9BQ66 201 aa3.88□□□□□ -1.79
PKP4-206ENST00000452162 LCE3CQ5T5A8 94 aa3.84□□□□□ -1.79
PKP4-206ENST00000452162 MT1EP04732 61 aa3.8□□□□□ -1.8
PKP4-206ENST00000452162 KRTAP20-1Q3LI63 56 aa3.8□□□□□ -1.8
PKP4-206ENST00000452162 SPRR2DP22532 72 aa3.77□□□□□ -1.81
PKP4-206ENST00000452162 MT1LQ93083 61 aa3.76□□□□□ -1.81
PKP4-206ENST00000452162 KRTAP2-3P0C7H8 128 aa3.74□□□□□ -1.81
PKP4-206ENST00000452162 LCE3BQ5TA77 95 aa3.74□□□□□ -1.81
PKP4-206ENST00000452162 KRTAP2-4Q9BYR9 128 aa3.74□□□□□ -1.81
PKP4-206ENST00000452162 LCE4AQ5TA78 99 aa3.73□□□□□ -1.81
PKP4-206ENST00000452162 KRTAP19-3Q7Z4W3 81 aa3.72□□□□□ -1.81
PKP4-206ENST00000452162 LCE5AQ5TCM9 118 aa3.71□□□□□ -1.82
PKP4-206ENST00000452162 KRTAP4-7Q9BYR0 210 aa3.7□□□□□ -1.82
PKP4-206ENST00000452162 KRTAP9-6A8MVA2 160 aa3.69□□□□□ -1.82
PKP4-206ENST00000452162 KRTAP9-9Q9BYP9 154 aa3.66□□□□□ -1.82
PKP4-206ENST00000452162 KRTAP9-4Q9BYQ2 154 aa3.66□□□□□ -1.82
PKP4-206ENST00000452162 MT1GP13640 62 aa3.65□□□□□ -1.83
PKP4-206ENST00000452162 KRTAP2-2Q9BYT5 123 aa3.63□□□□□ -1.83
PKP4-206ENST00000452162 KRTAP2-1Q9BYU5 128 aa3.63□□□□□ -1.83
PKP4-206ENST00000452162 DSTQ03001 7570 aaKnown RBP3.61□□□□□ -1.83
PKP4-206ENST00000452162 MT1MQ8N339 61 aa3.6□□□□□ -1.83
PKP4-206ENST00000452162 KRTAP4-3Q9BYR4 195 aa3.54□□□□□ -1.84
PKP4-206ENST00000452162 LCE1DQ5T752 114 aa3.51□□□□□ -1.85
PKP4-206ENST00000452162 KRTAP4-9Q9BYQ8 210 aa3.39□□□□□ -1.87
PKP4-206ENST00000452162 KRTAP5-4Q6L8H1 288 aa3.32□□□□□ -1.88
PKP4-206ENST00000452162 MT4P47944 62 aa3.3□□□□□ -1.88
PKP4-206ENST00000452162 KRTAP4-11Q9BYQ6 195 aa3.3□□□□□ -1.88
PKP4-206ENST00000452162 KRTAP5-5Q701N2 237 aaPredicted RBP3.29□□□□□ -1.88
PKP4-206ENST00000452162 HMCN1Q96RW7 5635 aa3.26□□□□□ -1.89
PKP4-206ENST00000452162 KRTAP4-2Q9BYR5 136 aa3.23□□□□□ -1.89
PKP4-206ENST00000452162 SYNE1Q8NF91 8797 aaKnown RBP3.18□□□□□ -1.9
PKP4-206ENST00000452162 MT1AP04731 61 aa3.18□□□□□ -1.9
PKP4-206ENST00000452162 KRTAP6-1Q3LI64 71 aa3.17□□□□□ -1.9
PKP4-206ENST00000452162 KRTAP12-4P60329 112 aa3.13□□□□□ -1.91
PKP4-206ENST00000452162 KRTAP20-2Q3LI61 65 aa3.12□□□□□ -1.91
PKP4-206ENST00000452162 AHNAK2Q8IVF2 5795 aa3.06□□□□□ -1.92
PKP4-206ENST00000452162 GPR98Q8WXG9 6306 aa3.05□□□□□ -1.92
PKP4-206ENST00000452162 KRTAP5-3Q6L8H2 238 aa3.03□□□□□ -1.92
PKP4-206ENST00000452162 KRTAP5-10Q6L8G5 202 aa2.97□□□□□ -1.93
PKP4-206ENST00000452162 KRTAP5-2Q701N4 177 aa2.94□□□□□ -1.94
PKP4-206ENST00000452162 KRTAP6-2Q3LI66 62 aa2.92□□□□□ -1.94
PKP4-206ENST00000452162 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
PKP4-206ENST00000452162 LCE1FQ5T754 118 aa2.9□□□□□ -1.94
PKP4-206ENST00000452162 LCE3EQ5T5B0 92 aa2.86□□□□□ -1.95
PKP4-206ENST00000452162 MT3P25713 68 aa2.85□□□□□ -1.95
PKP4-206ENST00000452162 LCE1EQ5T753 118 aa2.83□□□□□ -1.96
PKP4-206ENST00000452162 KRTAP5-7Q6L8G8 165 aa2.81□□□□□ -1.96
PKP4-206ENST00000452162 OBSCNQ5VST9 7968 aa2.78□□□□□ -1.96
PKP4-206ENST00000452162 KRTAP5-8O75690 187 aa2.71□□□□□ -1.98
PKP4-206ENST00000452162 PRM1P04553 51 aa2.63□□□□□ -1.99
PKP4-206ENST00000452162 KRTAP5-1Q6L8H4 278 aa2.61□□□□□ -1.99
PKP4-206ENST00000452162 MUC5ACP98088 5654 aa2.55□□□□□ -2
PKP4-206ENST00000452162 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
PKP4-206ENST00000452162 AHNAKQ09666 5890 aaKnown RBP2.42□□□□□ -2.02
PKP4-206ENST00000452162 LCE1BQ5T7P3 118 aa2.41□□□□□ -2.02
PKP4-206ENST00000452162 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
PKP4-206ENST00000452162 KRTAP5-11Q6L8G4 156 aa2.23□□□□□ -2.05
PKP4-206ENST00000452162 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.17□□□□□ -2.06
PKP4-206ENST00000452162 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
PKP4-206ENST00000452162 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
PKP4-206ENST00000452162 KRTAP4-4Q9BYR3 166 aa1.86□□□□□ -2.11
PKP4-206ENST00000452162 PHGR1C9JFL3 82 aa1.84□□□□□ -2.12
PKP4-206ENST00000452162 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
PKP4-206ENST00000452162 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 11.8 ms