RNA–Protein interactions for RNA: ENST00000451517.5

NDUFA3-209, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-209ENST00000451517 KRTAP15-1Q3LI76 137 aa4.12□□□□□ -1.75
NDUFA3-209ENST00000451517 MT1EP04732 61 aa4.1□□□□□ -1.75
NDUFA3-209ENST00000451517 KRTAP5-9P26371 169 aa4.02□□□□□ -1.77
NDUFA3-209ENST00000451517 SPRR2FQ96RM1 72 aa4.02□□□□□ -1.77
NDUFA3-209ENST00000451517 MT1LQ93083 61 aa4.01□□□□□ -1.77
NDUFA3-209ENST00000451517 MDN1Q9NU22 5596 aa4□□□□□ -1.77
NDUFA3-209ENST00000451517 KRTAP19-4Q3LI73 84 aa3.98□□□□□ -1.77
NDUFA3-209ENST00000451517 KRTAP19-3Q7Z4W3 81 aa3.95□□□□□ -1.78
NDUFA3-209ENST00000451517 LCE3CQ5T5A8 94 aa3.93□□□□□ -1.78
NDUFA3-209ENST00000451517 SPRR5A0A1B0GTR4 108 aa3.92□□□□□ -1.78
NDUFA3-209ENST00000451517 KRTAP2-3P0C7H8 128 aa3.91□□□□□ -1.78
NDUFA3-209ENST00000451517 KRTAP2-4Q9BYR9 128 aa3.91□□□□□ -1.78
NDUFA3-209ENST00000451517 MT1GP13640 62 aa3.9□□□□□ -1.79
NDUFA3-209ENST00000451517 LCE1AQ5T7P2 110 aa3.88□□□□□ -1.79
NDUFA3-209ENST00000451517 LCE5AQ5TCM9 118 aa3.88□□□□□ -1.79
NDUFA3-209ENST00000451517 MT1MQ8N339 61 aa3.86□□□□□ -1.79
NDUFA3-209ENST00000451517 KRTAP4-7Q9BYR0 210 aa3.86□□□□□ -1.79
NDUFA3-209ENST00000451517 SPRR2EP22531 72 aa3.83□□□□□ -1.8
NDUFA3-209ENST00000451517 SPRR2BP35325 72 aa3.83□□□□□ -1.8
NDUFA3-209ENST00000451517 SPRR2AP35326 72 aa3.83□□□□□ -1.8
NDUFA3-209ENST00000451517 LCE3BQ5TA77 95 aa3.79□□□□□ -1.8
NDUFA3-209ENST00000451517 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
NDUFA3-209ENST00000451517 KRTAP2-1Q9BYU5 128 aa3.77□□□□□ -1.81
NDUFA3-209ENST00000451517 GPR98Q8WXG9 6306 aa3.77□□□□□ -1.81
NDUFA3-209ENST00000451517 KRTAP4-12Q9BQ66 201 aa3.76□□□□□ -1.81
NDUFA3-209ENST00000451517 KRTAP9-9Q9BYP9 154 aa3.76□□□□□ -1.81
NDUFA3-209ENST00000451517 KRTAP9-4Q9BYQ2 154 aa3.76□□□□□ -1.81
NDUFA3-209ENST00000451517 KRTAP4-3Q9BYR4 195 aa3.76□□□□□ -1.81
NDUFA3-209ENST00000451517 KRTAP9-6A8MVA2 160 aa3.72□□□□□ -1.81
NDUFA3-209ENST00000451517 LUZP6Q538Z0 58 aa3.71□□□□□ -1.82
NDUFA3-209ENST00000451517 SPRR2DP22532 72 aa3.69□□□□□ -1.82
NDUFA3-209ENST00000451517 NDUFAF8A1L188 74 aa3.6□□□□□ -1.83
NDUFA3-209ENST00000451517 LCE1DQ5T752 114 aa3.55□□□□□ -1.84
NDUFA3-209ENST00000451517 KRTAP5-5Q701N2 237 aaPredicted RBP3.5□□□□□ -1.85
NDUFA3-209ENST00000451517 DSTQ03001 7570 aaKnown RBP3.5□□□□□ -1.85
NDUFA3-209ENST00000451517 KRTAP4-9Q9BYQ8 210 aa3.49□□□□□ -1.85
NDUFA3-209ENST00000451517 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
NDUFA3-209ENST00000451517 MT1AP04731 61 aa3.42□□□□□ -1.86
NDUFA3-209ENST00000451517 KRTAP6-1Q3LI64 71 aa3.37□□□□□ -1.87
NDUFA3-209ENST00000451517 AHNAK2Q8IVF2 5795 aa3.36□□□□□ -1.87
NDUFA3-209ENST00000451517 KRTAP5-4Q6L8H1 288 aa3.36□□□□□ -1.87
NDUFA3-209ENST00000451517 HMCN1Q96RW7 5635 aa3.33□□□□□ -1.88
NDUFA3-209ENST00000451517 KRTAP5-10Q6L8G5 202 aa3.32□□□□□ -1.88
NDUFA3-209ENST00000451517 KRTAP4-11Q9BYQ6 195 aa3.32□□□□□ -1.88
NDUFA3-209ENST00000451517 LCE4AQ5TA78 99 aa3.3□□□□□ -1.88
NDUFA3-209ENST00000451517 KRTAP5-3Q6L8H2 238 aa3.25□□□□□ -1.89
NDUFA3-209ENST00000451517 SYNE1Q8NF91 8797 aaKnown RBP3.24□□□□□ -1.89
NDUFA3-209ENST00000451517 KRTAP12-4P60329 112 aa3.23□□□□□ -1.89
NDUFA3-209ENST00000451517 KRTAP5-7Q6L8G8 165 aa3.23□□□□□ -1.89
NDUFA3-209ENST00000451517 MT4P47944 62 aa3.21□□□□□ -1.9
NDUFA3-209ENST00000451517 A0A0A0MQY5 61 aa3.14□□□□□ -1.91
NDUFA3-209ENST00000451517 KRTAP20-2Q3LI61 65 aa3.14□□□□□ -1.91
NDUFA3-209ENST00000451517 KRTAP6-2Q3LI66 62 aa3.11□□□□□ -1.91
NDUFA3-209ENST00000451517 MT3P25713 68 aa3.09□□□□□ -1.91
NDUFA3-209ENST00000451517 H3BS24 57 aa3.06□□□□□ -1.92
NDUFA3-209ENST00000451517 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
NDUFA3-209ENST00000451517 INE1O15225 51 aa2.99□□□□□ -1.93
NDUFA3-209ENST00000451517 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
NDUFA3-209ENST00000451517 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
NDUFA3-209ENST00000451517 AHNAKQ09666 5890 aaKnown RBP2.83□□□□□ -1.96
NDUFA3-209ENST00000451517 MUC5ACP98088 5654 aa2.81□□□□□ -1.96
NDUFA3-209ENST00000451517 MUC5BQ9HC84 5762 aaPredicted RBP2.76□□□□□ -1.97
NDUFA3-209ENST00000451517 KRTAP5-8O75690 187 aa2.72□□□□□ -1.97
NDUFA3-209ENST00000451517 LCE1EQ5T753 118 aa2.7□□□□□ -1.98
NDUFA3-209ENST00000451517 OBSCNQ5VST9 7968 aa2.67□□□□□ -1.98
NDUFA3-209ENST00000451517 KRTAP5-1Q6L8H4 278 aa2.63□□□□□ -1.99
NDUFA3-209ENST00000451517 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
NDUFA3-209ENST00000451517 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
NDUFA3-209ENST00000451517 PRM1P04553 51 aa2.47□□□□□ -2.01
NDUFA3-209ENST00000451517 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.39□□□□□ -2.03
NDUFA3-209ENST00000451517 KRTAP5-11Q6L8G4 156 aa2.25□□□□□ -2.05
NDUFA3-209ENST00000451517 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
NDUFA3-209ENST00000451517 LCE1FQ5T754 118 aa2.02□□□□□ -2.09
NDUFA3-209ENST00000451517 KRTAP4-4Q9BYR3 166 aa1.99□□□□□ -2.09
NDUFA3-209ENST00000451517 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
NDUFA3-209ENST00000451517 MUC19Q7Z5P9 8384 aa1.59□□□□□ -2.15
NDUFA3-209ENST00000451517 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
NDUFA3-209ENST00000451517 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 9.2 ms