RNA–Protein interactions for RNA: ENST00000450510.2

HOXD8-203, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HOXD8, Length 1,268 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-203ENST00000450510 KRTAP19-4Q3LI73 84 aa7.05□□□□□ -1.28
HOXD8-203ENST00000450510 KRTAP20-1Q3LI63 56 aa7.04□□□□□ -1.28
HOXD8-203ENST00000450510 LCE1DQ5T752 114 aa6.98□□□□□ -1.29
HOXD8-203ENST00000450510 MDN1Q9NU22 5596 aa6.98□□□□□ -1.29
HOXD8-203ENST00000450510 KMT2DO14686 5537 aa6.96□□□□□ -1.3
HOXD8-203ENST00000450510 LCE4AQ5TA78 99 aa6.93□□□□□ -1.3
HOXD8-203ENST00000450510 KRTAP15-1Q3LI76 137 aa6.91□□□□□ -1.3
HOXD8-203ENST00000450510 KRTAP12-3P60328 96 aa6.89□□□□□ -1.31
HOXD8-203ENST00000450510 KRTAP4-7Q9BYR0 210 aa6.87□□□□□ -1.31
HOXD8-203ENST00000450510 SPRR2FQ96RM1 72 aa6.86□□□□□ -1.31
HOXD8-203ENST00000450510 KRTAP19-5Q3LI72 72 aa6.76□□□□□ -1.33
HOXD8-203ENST00000450510 KRTAP4-9Q9BYQ8 210 aa6.76□□□□□ -1.33
HOXD8-203ENST00000450510 KRTAP2-3P0C7H8 128 aa6.72□□□□□ -1.33
HOXD8-203ENST00000450510 KRTAP2-4Q9BYR9 128 aa6.72□□□□□ -1.33
HOXD8-203ENST00000450510 SPRR2EP22531 72 aa6.71□□□□□ -1.34
HOXD8-203ENST00000450510 SPRR2BP35325 72 aa6.71□□□□□ -1.34
HOXD8-203ENST00000450510 SPRR2AP35326 72 aa6.71□□□□□ -1.34
HOXD8-203ENST00000450510 SPRR5A0A1B0GTR4 108 aa6.67□□□□□ -1.34
HOXD8-203ENST00000450510 LCE1AQ5T7P2 110 aa6.66□□□□□ -1.34
HOXD8-203ENST00000450510 KRTAP19-7Q3SYF9 63 aa6.65□□□□□ -1.34
HOXD8-203ENST00000450510 KRTAP4-2Q9BYR5 136 aa6.56□□□□□ -1.36
HOXD8-203ENST00000450510 MT1EP04732 61 aa6.55□□□□□ -1.36
HOXD8-203ENST00000450510 LUZP6Q538Z0 58 aa6.54□□□□□ -1.36
HOXD8-203ENST00000450510 LCE5AQ5TCM9 118 aa6.54□□□□□ -1.36
HOXD8-203ENST00000450510 KRTAP4-11Q9BYQ6 195 aa6.54□□□□□ -1.36
HOXD8-203ENST00000450510 SPRR2DP22532 72 aa6.49□□□□□ -1.37
HOXD8-203ENST00000450510 KRTAP2-2Q9BYT5 123 aa6.48□□□□□ -1.37
HOXD8-203ENST00000450510 KRTAP2-1Q9BYU5 128 aa6.48□□□□□ -1.37
HOXD8-203ENST00000450510 LCE3CQ5T5A8 94 aa6.46□□□□□ -1.38
HOXD8-203ENST00000450510 MT1LQ93083 61 aa6.44□□□□□ -1.38
HOXD8-203ENST00000450510 KRTAP19-3Q7Z4W3 81 aa6.43□□□□□ -1.38
HOXD8-203ENST00000450510 NDUFAF8A1L188 74 aa6.4□□□□□ -1.38
HOXD8-203ENST00000450510 GPR98Q8WXG9 6306 aa6.36□□□□□ -1.39
HOXD8-203ENST00000450510 MT1GP13640 62 aa6.36□□□□□ -1.39
HOXD8-203ENST00000450510 MT1MQ8N339 61 aa6.2□□□□□ -1.42
HOXD8-203ENST00000450510 DSTQ03001 7570 aaKnown RBP6.14□□□□□ -1.43
HOXD8-203ENST00000450510 KRTAP9-6A8MVA2 160 aa6.03□□□□□ -1.44
HOXD8-203ENST00000450510 KRTAP4-3Q9BYR4 195 aa5.97□□□□□ -1.45
HOXD8-203ENST00000450510 HMCN1Q96RW7 5635 aa5.78□□□□□ -1.48
HOXD8-203ENST00000450510 A0A0A0MQY5 61 aa5.77□□□□□ -1.49
HOXD8-203ENST00000450510 KRTAP5-4Q6L8H1 288 aa5.75□□□□□ -1.49
HOXD8-203ENST00000450510 KRTAP5-3Q6L8H2 238 aa5.72□□□□□ -1.49
HOXD8-203ENST00000450510 AHNAK2Q8IVF2 5795 aa5.72□□□□□ -1.49
HOXD8-203ENST00000450510 MT4P47944 62 aa5.68□□□□□ -1.5
HOXD8-203ENST00000450510 KRTAP5-5Q701N2 237 aaPredicted RBP5.68□□□□□ -1.5
HOXD8-203ENST00000450510 KRTAP5-10Q6L8G5 202 aa5.56□□□□□ -1.52
HOXD8-203ENST00000450510 MT1AP04731 61 aa5.51□□□□□ -1.53
HOXD8-203ENST00000450510 KRTAP12-4P60329 112 aa5.45□□□□□ -1.54
HOXD8-203ENST00000450510 INE1O15225 51 aa5.41□□□□□ -1.54
HOXD8-203ENST00000450510 KRTAP5-7Q6L8G8 165 aa5.39□□□□□ -1.55
HOXD8-203ENST00000450510 SYNE1Q8NF91 8797 aaKnown RBP5.38□□□□□ -1.55
HOXD8-203ENST00000450510 KRTAP6-1Q3LI64 71 aa5.38□□□□□ -1.55
HOXD8-203ENST00000450510 KRTAP20-2Q3LI61 65 aa5.36□□□□□ -1.55
HOXD8-203ENST00000450510 KRTAP5-2Q701N4 177 aa5.1□□□□□ -1.59
HOXD8-203ENST00000450510 MT3P25713 68 aa4.99□□□□□ -1.61
HOXD8-203ENST00000450510 KRTAP6-2Q3LI66 62 aa4.99□□□□□ -1.61
HOXD8-203ENST00000450510 LCE3DQ9BYE3 92 aa4.88□□□□□ -1.63
HOXD8-203ENST00000450510 AHNAKQ09666 5890 aaKnown RBP4.87□□□□□ -1.63
HOXD8-203ENST00000450510 MUC5ACP98088 5654 aa4.81□□□□□ -1.64
HOXD8-203ENST00000450510 LCE3EQ5T5B0 92 aa4.77□□□□□ -1.65
HOXD8-203ENST00000450510 MUC5BQ9HC84 5762 aaPredicted RBP4.77□□□□□ -1.65
HOXD8-203ENST00000450510 KRTAP5-8O75690 187 aa4.66□□□□□ -1.66
HOXD8-203ENST00000450510 OBSCNQ5VST9 7968 aa4.64□□□□□ -1.67
HOXD8-203ENST00000450510 LCE1EQ5T753 118 aa4.49□□□□□ -1.69
HOXD8-203ENST00000450510 KRTAP5-1Q6L8H4 278 aa4.49□□□□□ -1.69
HOXD8-203ENST00000450510 KRTAP5-11Q6L8G4 156 aa4.41□□□□□ -1.7
HOXD8-203ENST00000450510 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.34□□□□□ -1.71
HOXD8-203ENST00000450510 PRM1P04553 51 aa4.18□□□□□ -1.74
HOXD8-203ENST00000450510 LCE1CQ5T751 118 aa4.15□□□□□ -1.75
HOXD8-203ENST00000450510 LCE1BQ5T7P3 118 aa4.15□□□□□ -1.75
HOXD8-203ENST00000450510 LCE1FQ5T754 118 aa4.13□□□□□ -1.75
HOXD8-203ENST00000450510 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
HOXD8-203ENST00000450510 KRTAP21-2Q3LI59 83 aa3.54□□□□□ -1.84
HOXD8-203ENST00000450510 PHGR1C9JFL3 82 aa3.24□□□□□ -1.89
HOXD8-203ENST00000450510 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.95
HOXD8-203ENST00000450510 KRTAP21-1Q3LI58 79 aa2.62□□□□□ -1.99
HOXD8-203ENST00000450510 MUC16Q8WXI7 14507 aa2.03□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 234.1 ms