RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 LCE1BQ5T7P3 118 aa4.28□□□□□ -1.72
RAPGEF3-205ENST00000449771 LCE1DQ5T752 114 aa4.25□□□□□ -1.73
RAPGEF3-205ENST00000449771 KRTAP4-3Q9BYR4 195 aa4.25□□□□□ -1.73
RAPGEF3-205ENST00000449771 KRTAP9-6A0A140TA67 174 aa4.21□□□□□ -1.74
RAPGEF3-205ENST00000449771 FLGP20930 4061 aaPredicted RBP4.21□□□□□ -1.74
RAPGEF3-205ENST00000449771 KMT2CQ8NEZ4 4911 aaKnown RBP4.17□□□□□ -1.74
RAPGEF3-205ENST00000449771 KRTAP20-1Q3LI63 56 aa4.11□□□□□ -1.75
RAPGEF3-205ENST00000449771 EPPK1P58107 5090 aaKnown RBP4.08□□□□□ -1.76
RAPGEF3-205ENST00000449771 MT1AP04731 61 aa4.06□□□□□ -1.76
RAPGEF3-205ENST00000449771 LCE2AQ5TA79 106 aaPredicted RBP4.06□□□□□ -1.76
RAPGEF3-205ENST00000449771 KRTAP2-3P0C7H8 128 aa4.04□□□□□ -1.76
RAPGEF3-205ENST00000449771 LCE5AQ5TCM9 118 aa4.04□□□□□ -1.76
RAPGEF3-205ENST00000449771 KRTAP2-4Q9BYR9 128 aa4.04□□□□□ -1.76
RAPGEF3-205ENST00000449771 KRTAP2-1Q9BYU5 128 aa4.04□□□□□ -1.76
RAPGEF3-205ENST00000449771 KRTAP19-7Q3SYF9 63 aa4.01□□□□□ -1.77
RAPGEF3-205ENST00000449771 KRTAP4-9Q9BYQ8 210 aa3.98□□□□□ -1.77
RAPGEF3-205ENST00000449771 KRTAP9-7A8MTY7 169 aa3.97□□□□□ -1.77
RAPGEF3-205ENST00000449771 ABCA13Q86UQ4 5058 aa3.96□□□□□ -1.78
RAPGEF3-205ENST00000449771 KRTAP6-3Q3LI67 103 aa3.9□□□□□ -1.78
RAPGEF3-205ENST00000449771 FAT4Q6V0I7 4981 aa3.86□□□□□ -1.79
RAPGEF3-205ENST00000449771 LCE1AQ5T7P2 110 aa3.85□□□□□ -1.79
RAPGEF3-205ENST00000449771 RNF213Q63HN8 5207 aa3.83□□□□□ -1.8
RAPGEF3-205ENST00000449771 KRTAP6-2Q3LI66 62 aa3.82□□□□□ -1.8
RAPGEF3-205ENST00000449771 SYNE2Q8WXH0 6885 aaKnown RBP3.81□□□□□ -1.8
RAPGEF3-205ENST00000449771 HMCN2Q8NDA2 5059 aa3.8□□□□□ -1.8
RAPGEF3-205ENST00000449771 KRTAP6-1Q3LI64 71 aa3.8□□□□□ -1.8
RAPGEF3-205ENST00000449771 LCE4AQ5TA78 99 aa3.79□□□□□ -1.8
RAPGEF3-205ENST00000449771 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.79□□□□□ -1.8
RAPGEF3-205ENST00000449771 KRTAP9-4Q9BYQ2 154 aa3.78□□□□□ -1.8
RAPGEF3-205ENST00000449771 FSIP2Q5CZC0 6907 aa3.75□□□□□ -1.81
RAPGEF3-205ENST00000449771 KRTAP2-2Q9BYT5 123 aa3.73□□□□□ -1.81
RAPGEF3-205ENST00000449771 LCE1CQ5T751 118 aa3.72□□□□□ -1.81
RAPGEF3-205ENST00000449771 LCE1EQ5T753 118 aa3.72□□□□□ -1.81
RAPGEF3-205ENST00000449771 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
RAPGEF3-205ENST00000449771 KRTAP9-6A8MVA2 160 aa3.69□□□□□ -1.82
RAPGEF3-205ENST00000449771 MUC2Q02817 5179 aa3.66□□□□□ -1.82
RAPGEF3-205ENST00000449771 UBR4Q5T4S7 5183 aa3.65□□□□□ -1.82
RAPGEF3-205ENST00000449771 SYNE1Q8NF91 8797 aaKnown RBP3.57□□□□□ -1.84
RAPGEF3-205ENST00000449771 OBSCNQ5VST9 7968 aa3.45□□□□□ -1.86
RAPGEF3-205ENST00000449771 KRTAP9-9Q9BYP9 154 aa3.42□□□□□ -1.86
RAPGEF3-205ENST00000449771 KRTAP4-11Q9BYQ6 195 aa3.18□□□□□ -1.9
RAPGEF3-205ENST00000449771 KRTAP4-6Q9BYQ5 205 aa3.17□□□□□ -1.9
RAPGEF3-205ENST00000449771 NEBP20929 6669 aa3.17□□□□□ -1.9
RAPGEF3-205ENST00000449771 KRTAP5-9P26371 169 aa3.16□□□□□ -1.9
RAPGEF3-205ENST00000449771 USH2AO75445 5202 aa3.15□□□□□ -1.91
RAPGEF3-205ENST00000449771 KRTAP20-2Q3LI61 65 aa3.11□□□□□ -1.91
RAPGEF3-205ENST00000449771 MACF1Q9UPN3 7388 aaKnown RBP3.05□□□□□ -1.92
RAPGEF3-205ENST00000449771 FCGBPQ9Y6R7 5405 aaPredicted RBP3.05□□□□□ -1.92
RAPGEF3-205ENST00000449771 KMT2DO14686 5537 aa2.99□□□□□ -1.93
RAPGEF3-205ENST00000449771 SSPOA2VEC9 5147 aa2.98□□□□□ -1.93
RAPGEF3-205ENST00000449771 DSTQ03001 7570 aaKnown RBP2.97□□□□□ -1.93
RAPGEF3-205ENST00000449771 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
RAPGEF3-205ENST00000449771 KRTAP4-12Q9BQ66 201 aa2.95□□□□□ -1.94
RAPGEF3-205ENST00000449771 KRTAP4-2Q9BYR5 136 aa2.95□□□□□ -1.94
RAPGEF3-205ENST00000449771 KRTAP5-5Q701N2 237 aaPredicted RBP2.94□□□□□ -1.94
RAPGEF3-205ENST00000449771 KRTAP5-4Q6L8H1 288 aa2.9□□□□□ -1.94
RAPGEF3-205ENST00000449771 GPR98Q8WXG9 6306 aa2.71□□□□□ -1.97
RAPGEF3-205ENST00000449771 MUC12Q9UKN1 5478 aa2.67□□□□□ -1.98
RAPGEF3-205ENST00000449771 MDN1Q9NU22 5596 aa2.63□□□□□ -1.99
RAPGEF3-205ENST00000449771 MUC19Q7Z5P9 8384 aa2.61□□□□□ -1.99
RAPGEF3-205ENST00000449771 KRTAP5-3Q6L8H2 238 aa2.51□□□□□ -2.01
RAPGEF3-205ENST00000449771 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
RAPGEF3-205ENST00000449771 MUC5ACP98088 5654 aa2.31□□□□□ -2.04
RAPGEF3-205ENST00000449771 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
RAPGEF3-205ENST00000449771 KRTAP5-10Q6L8G5 202 aa2.17□□□□□ -2.06
RAPGEF3-205ENST00000449771 AHNAK2Q8IVF2 5795 aa2.16□□□□□ -2.06
RAPGEF3-205ENST00000449771 HMCN1Q96RW7 5635 aa2.13□□□□□ -2.07
RAPGEF3-205ENST00000449771 KRTAP5-2Q701N4 177 aa2.12□□□□□ -2.07
RAPGEF3-205ENST00000449771 MUC5BQ9HC84 5762 aaPredicted RBP2.02□□□□□ -2.09
RAPGEF3-205ENST00000449771 KRTAP5-1Q6L8H4 278 aa1.96□□□□□ -2.1
RAPGEF3-205ENST00000449771 KRTAP5-11Q6L8G4 156 aa1.96□□□□□ -2.1
RAPGEF3-205ENST00000449771 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
RAPGEF3-205ENST00000449771 AHNAKQ09666 5890 aaKnown RBP1.84□□□□□ -2.12
RAPGEF3-205ENST00000449771 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
RAPGEF3-205ENST00000449771 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.63□□□□□ -2.15
RAPGEF3-205ENST00000449771 KRTAP5-7Q6L8G8 165 aa1.58□□□□□ -2.16
RAPGEF3-205ENST00000449771 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 75.1 ms